ClCG11G000040.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG11G000040.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr11 : 74374 .. 79182 (-)
Sequence length1634
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACCCTGATTTCCCCTTACTCACCCAACTCGCTCCATTTCTTCGTCTTCCTTCCACACGCGGCGTTTGTCGAAGAGCGCAACCCACCACCCATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTAGGGTGGCAACGTCCGCTTACAGCAGATCCACACAACCTTGACGGCGTCTCGTTGCACGCCACAGCAGCGACCTCAACGTCCAGTTCCACAGACGCTACTTTCCACGCGTTTATTGGCTGAATAGCGACTTTCAGCAGCAACCCACTCCTCAATCGACTTCGATTCAGTTTGCCAGTATTCCCTAGGGGTCACATTTGCGATTTTCAACTCGATCACGTTTCAGCAAAGATTCGAGTCCTATCGGTAAAGTTTCATGGTTAAATTTGATATAATTTGTTTCGGATTGAATTTTAGTGTTTGAATTTGATTCTATTGCTTGTAGCTCTTCTGTTTTAGGTTCTTACTAGTTTCCAACTCCTCCGAACACCTTTCAGCAAAGACCCGAGCTCTTTTTTGGTAAGATTTGGGCGGTAACGGTGCTTTGAGACTCTTTTGGACTCAGATGAAATGATTTAGATTAATGTCTAACCCTAGGGAATTCGTGGTTGTAGATTCAGACTCATTCGGGGTCTTCATACTAAGGTTTAAGGTCGTGTTTTGGTACGCCCCTCTTGAATACTCTTTTCAACTCAATTCAAACGGCTAAGTATTGCCCTTTTTGTTTAGGACTCTTTTGGGCTTAGGAGCACTGTAGGCAAGTAGAGTTTTACTTGTTGGGTCTGTATGTTGTTTGCTATTTTCCTGTGCTTTATTTGTGCTATTATTCTTTATGATGTAAATACTTGACGGTCTTAAACCTTTAGGTGCTTTGGATGTTTAAGCTTGCAGGAATGTTGTAATGATGTTGTGACGACTAACATGCTGGGGAGTGGTTGTATGACCTTGTGTTATAAGCATGTGCTACTATTGAAAATGTCTGATTAAGCATATGATTTCTGTTGAGGGTACACTATTGTTTCATGTGGTTTTTACATATAGAAGGGTTAGAATCATATTGTAGGACTCATACATTCAAATGATTGTGTGAGAAAGAAGTTTAGGGTAATTCGTGCATTTATAAAGGAAAGTGGGTGCATATCGGTGTGCCTTAGGTAAAAATGGTCATGGGGTGATATGTCGTTGTTGGTGGCATTGATGCCTTGGGTAAAAATGATCAAGGGTCTACGTAGAGGGTCTACAAAGGCAAATATTGGGGCTCTTAAGAAAGAGGTACAATATGTTGCTTATTCATTGAGACATTGGATAAAAATGGTCAAGGGTCAATAGTTGAGCGTCGCAGAGAACGTTGAGGCCCAAGATAAAAATTATAAGGGGTTGCCGCATCTTGAAGGAATCAGTCTCAGAGAGCTTTGGGAGGGCTAATATGAGTGTTGAGTAGTTGAGTTGAGTGAGCTCGTGAAGCTAGCGTAGAGGTTGAGTGTGTGTTACATGGCGTGTTGAGTAAAAATCATCAGCACCTATAAAGTTTGGTTGTGGCTCGGTACATAACGCATATTGAGTAAGTAGCTCACACTTGAGGAGCCACCAAATAGCATACAAGGCAAACATCATGCTATTCACAACAATTTTATTAGATTTTTACATCCATCCTCAAGGTTTTGATTTTCTGTTCAATGTTTGATTTGCCTTATCTTTGAGCTACCAAACAGCGAACCTCACCTATGATTGAGGGTTGAGGGAGTTTTATTCTTATCGTCTATTTTCACAACCTAACTTTATCCTTTTTTAAAAAGAGAACAATAAATTCTGCATATCTGTTGTGCTTCTCACGTCCTTATGCTATAATACTCACATCATGTTTTGAATTATGTAGGTGACTTTGTTAAGTGTCACTAGGAAATGAGGAAAAAACCTATTTTAAATTTCATATGCATGGTCAAGCTAGATAACAATTGATATAGCTGTATATCACAAAATTAAACTATTTCATTCATAATGCAGCAATCATTCAGTCTCTATCCCGCACTGGCTTGAGGAACATAGCCAACTGGTGTAGTTTATAATTTGAACAGAAAAAGGAAAAGGAAATGCTACGAAGACGACTGTGTTACTTACTATCTAGCTCACTTGGCTCTGTGCGTTCTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGTGTCCGTTACTAGAGTTCCAGCAAACCCCTAGCCTTGATCGGAGAGTAGGTTTCCCTCTTTCGGGAAATATCTTTGGTTTTCGAGCTTACAGCCTTTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACACGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGGAGAGGTCACAAGGGCCAAAGAGCAAGAGGCTCTGGGAAGCTTGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAAAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTATGTTCTCATCTTATTGCTTTGTTGTTTGTGATCTGTGTTTTAAAAAGCCCACAGCCCACTGAGGCATGCACCTGGCACAACCTTTGTGTGACTGCGTCTCACTTCAAAGTAGCGTGCCTCAAGTTTGATTTCTTACCTTTATTTTTTCTTCTAATTTTGAAGAAATAATTATGTTAATATTCTTACCATCTTGAATAAAAGCTCTACTTTCTTGAGCTTTTTATTATTATTCATCATACTAATTTCCTTCAAACTTTGTTTACATTATCCCTTATTAAAAAAACCTGTGCTTAAGCCCATGGAAGACTATTATGCTGTAGTGCACCTCCAGCATTGTTTATTTATTTTGAAAACTTTTTGCAATGGTTTGATGCAGAATTCTATAAATATAATGCGTCCCATTTTCATCTGGAAGAAAGCAGTCTTTAATATCCATATCTACTAGTAAATTTTTTTCCCTATGCGATGTTATAGGCAATTCATATTGCTTGATCTCTAAAGATTTACCTTCTGCATTTTGCATTACTTAATGCACAGCATATTTGGTATCTTCTGATGTTCAATCTCGAGCAATATTATTTTTGATAGTGTAAAAGACAAATATTTGTTTTGGCAGAATAATTTTTCCTTGAGTATTATGCTATTTCTTTTGTTTGATTCTTTCTTTGGTTTAATGACAGCCGGTTGGTTTGGGAAAGATTGCTAAACTTATTAATGCTGGGAAAATTGATTCCTCTGAATTAATCACTATGAAAACTCTCAAGGTATTATATGACTTCTATCTCAATTAGTATATCAAAAGCCTGAAGTACTTGTTTTTTTGATATTGTGTCATATTATTATGCTTACCAATATGAAAATAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGAGTAAGATTGATGGGACGTGGTGCCGAACAGATTAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACTAAAAATGTTTTTCTTTTTCCCTTCTGAGGTTGACTTCAATACCTATATGCTCCTTAGTTAAGCTGATGTTCTGTATAGATTATTCATAAATCTGGGGTATTGTCATGCTACTAATTTGAATTGAAGCTAGTGTACTCTTCTCAAAGAAGGGTCTAGTGTTGCAGATATTCTTCCAAGGATTGCATCTTGCTTTCTCTGTAATCTGGTTTGGGATCCAATTGCATTCAGATTACAGATTACCCGAATTTGGTATAACCAAAGGAATATGTTAGGTTTCAATACCCTGCACTCAACATTAAGCAACAAAGAACAGAGCAATATTTACTCTGTTTTACGATATATTTCCAACTAGAAGTTCCCAAGCAACTTGTAACTGAATTCTTTAACTCGCATCCCGAAGTTTCCTTATTACCCCTTCGAGAGATGTATAAAGGATTGGGGGTCTCACAGAATATTCCATGTTTGTGTAGCTTTTCAGACATTCTTATTTGCCTGTGATTGACGTGCTTAGTTTAGGTAGTATTAGCTAAAATACAAAGAGATCGCAAAAAATTTATTTCCAAGTTTTGTCATTCTCAGGTCTTTAACCAAGTGGATCGGGTCCAATAGCCTCTGATTTAGCTAGCAAGAGCTTCTTGCACATGGAACTATTCTTACGAGCCAAATGTTTTTCAAAAGCTTTCAAAATCAATTTTGAGTGGTTGTCAAATACTTTTATTTATTGCAAAATGACTTATTTTTTTAAATTAAACACTTGAAAGAGTATTCTAAACACACCCTAAATGTATGATGTTTTCAGGTGTCGAGGGTCACTGCTAGGGCGAAGGAAGCTGTCGAAGCTGCCGGTGGGACTGTTCGGAGAGTGTATTACAACAAATTAGGCTTTCGGGCGCTTCTCAAGCCTGAGTGGTTTGAAAAGAAAGGCAGAATCCTGCCACGAGCAGCAAGGCCACCGCCAAAGCAGCAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAAACCATTCCTTTTTCAGTTGAAGATGTAGATGGAGGGAGGGCAGCTTCCAATATGTCTACCTAATCATAGCCGTTCGACTTCGAATTAAGGAATTTAAGTTTTGGTTGCCTTTCTTAAATGCATTTTCTGTAGTAACCTGGTCATGATTTTGTCCCTATTAGTGTTTACACATTTCTTAGGATTAATGATGGACGTTGGCCACTTTTCAGCTGAGATTTTAAGGATTCGGGATGGTAATAAAGATCACGTCATGTTATCTATTATCAAGTCCAAGTATGTGTATAACTCTTAGATGTATACTTTTTTTTTTT

mRNA sequence

ATGGGTAACCCTGATTTCCCCTTACTCACCCAACTCGCTCCATTTCTTCGTCTTCCTTCCACACGCGGCGTTTGTCGAAGAGCGCAACCCACCACCCATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTAGGGTGGCAACGTCCGCTTACAGCAGATCCACACAACCTTGACGGCGTCTCGTTGCACGCCACAGCAGCGACCTCAACGTCCACGACTTTCAGCAGCAACCCACTCCTCAATCGACTTCGATTCAGTTTGCCAGTATTCCCTAGGGGTCACATTTGCGATTTTCAACTCGATCACGTTTCAGCAAAGATTCGAGTCCTATCGGTTCTTACTAGTTTCCAACTCCTCCGAACACCTTTCAGCAAAGACCCGAGCTCTTTTTTGATTCAGACTCATTCGGGGTCTTCATACTAAGGTTTAAGGTCGTGTTTTGCAATCATTCAGTCTCTATCCCGCACTGGCTTGAGGAACATAGCCAACTGGTGTAGTTTATAATTTGAACAGAAAAAGGAAAAGGAAATGCTACGAAGACGACTGTGTTACTTACTATCTAGCTCACTTGGCTCTGTGCGTTCTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGTGTCCGTTACTAGAGTTCCAGCAAACCCCTAGCCTTGATCGGAGAGTAGGTTTCCCTCTTTCGGGAAATATCTTTGGTTTTCGAGCTTACAGCCTTTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACACGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGGAGAGGTCACAAGGGCCAAAGAGCAAGAGGCTCTGGGAAGCTTGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAAAATCCTTTCAGCCTCACATTTCAGCCGGTTGGTTTGGGAAAGATTGCTAAACTTATTAATGCTGGGAAAATTGATTCCTCTGAATTAATCACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGAGTAAGATTGATGGGACGTGGTGCCGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGCTAGGGCGAAGGAAGCTGTCGAAGCTGCCGGTGGGACTGTTCGGAGAGTGTATTACAACAAATTAGGCTTTCGGGCGCTTCTCAAGCCTGAGTGGTTTGAAAAGAAAGGCAGAATCCTGCCACGAGCAGCAAGGCCACCGCCAAAGCAGCAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAAACCATTCCTTTTTCAGTTGAAGATGTAGATGGAGGGAGGGCAGCTTCCAATATGTCTACCTAATCATAGCCGTTCGACTTCGAATTAAGGAATTTAAGTTTTGGTTGCCTTTCTTAAATGCATTTTCTGTAGTAACCTGGTCATGATTTTGTCCCTATTAGTGTTTACACATTTCTTAGGATTAATGATGGACGTTGGCCACTTTTCAGCTGAGATTTTAAGGATTCGGGATGGTAATAAAGATCACGTCATGTTATCTATTATCAAGTCCAAGTATGTGTATAACTCTTAGATGTATACTTTTTTTTTTT

Coding sequence (CDS)

ATGGGTAACCCTGATTTCCCCTTACTCACCCAACTCGCTCCATTTCTTCGTCTTCCTTCCACACGCGGCGTTTGTCGAAGAGCGCAACCCACCACCCATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTAGGGTGGCAACGTCCGCTTACAGCAGATCCACACAACCTTGACGGCGTCTCGTTGCACGCCACAGCAGCGACCTCAACGTCCACGACTTTCAGCAGCAACCCACTCCTCAATCGACTTCGATTCAGTTTGCCAGTATTCCCTAGGGGTCACATTTGCGATTTTCAACTCGATCACGTTTCAGCAAAGATTCGAGTCCTATCGGTTCTTACTAGTTTCCAACTCCTCCGAACACCTTTCAGCAAAGACCCGAGCTCTTTTTTGATTCAGACTCATTCGGGGTCTTCATACTAA

Protein sequence

MGNPDFPLLTQLAPFLRLPSTRGVCRRAQPTTHLWRALAARALVLGWQRPLTADPHNLDGVSLHATAATSTSTTFSSNPLLNRLRFSLPVFPRGHICDFQLDHVSAKIRVLSVLTSFQLLRTPFSKDPSSFLIQTHSGSSY
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG11G000040ClCG11G000040gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG11G000040.1ClCG11G000040.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG11G000040.1.three_prime_UTR5ClCG11G000040.1.three_prime_UTR5three_prime_UTR
ClCG11G000040.1.three_prime_UTR4ClCG11G000040.1.three_prime_UTR4three_prime_UTR
ClCG11G000040.1.three_prime_UTR3ClCG11G000040.1.three_prime_UTR3three_prime_UTR
ClCG11G000040.1.three_prime_UTR2ClCG11G000040.1.three_prime_UTR2three_prime_UTR
ClCG11G000040.1.three_prime_UTR1ClCG11G000040.1.three_prime_UTR1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG11G000040.1.cds4ClCG11G000040.1.cds4CDS
ClCG11G000040.1.cds3ClCG11G000040.1.cds3CDS
ClCG11G000040.1.cds2ClCG11G000040.1.cds2CDS
ClCG11G000040.1.cds1ClCG11G000040.1.cds1CDS