ClCG10G017530.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACTCTACATTTTCCCAATTTCTATTTTTTTCTCTCTCTAGAATTATGGATTCTTCAATTGGCAATGTTCAGCTTGTTCCCAGAAAGTCCTCCGACGAGCTTTTGAGGAAATTTGCTGAGGTGGGATCGGAGTCCGGCGGCGGAAGGAGGCTGTTGACGGTGGTTAAGAGACGGCGGAAGAGGGTTAATGAGGAGTGCGATAGCCCCTCCGGCGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCGGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGGTAATTCCATACATAATCTAGTTTTAATTTTTTTTAATTACTTACCTCTATTTTATAACCATTTTATTTTTTTTATTTAAATAAAATTAAAATAATTTTTTAGTTTTTAGAGAATAGCTTGGTTTATTAAATTATGAGCAAAACTGAATATTTTTACCATGTTTATAAGCTTAATTTTAAGAAATCAAATGGTTAATAAAAATAGATTAATATACATATATATTTTTTACTTTTTAGAAGTTTATGTATAATAAATAGCTAATTTTAAAAAGTGTGATGAATTGCTCAAATCCTATTTTACATCTAATAAATTTATAAAATTTCAATTTTGTATTATATTTATTAAGTTATTAATTGGTAACCTGGCTTAACTCAACTAGTTAAAGTACATATCTTTAAGCAAAATGTTAGACTCTAATTTTTTGTTTTCCTATATTAACTGTTAAGTTCTAAAAAAACAATAAGTCACAAAAATGAACATAACTCAATTAGAATATGAACTTGTTTGTGACCGAAAAGTCTATAATTGAAATTTCCTCACCCTATGTTGTAAAAAAAAAAATAATAATGTCTTTATCTTAGACATTTTAAAATATTCATAAACATCAAATTAAAAGTTAAAAATTTTATAAAACACAAATTTCAATTTTATTTATAACAGATTCCTTATTTATAAAAGAAGTATAATATGTGAAGTTGACCCAAAATTAAAGTTATATTAGACACTATTAAAAGGTTCATGAAATTAATTAAACACAAAATTTAAAGCTTAGCCTTTTCTTTATTATTTTTAAAGTAGAGATTTAAGGGATAAATCTGTAATTTACCATTTTTTTCAAAAGAAAATTTTATTGTGTTTTAGACTTTTAGGATTTTTCAGTGATGATATTTGACCTTGTTGTTAGGTTTTCTTTTCTTTTATTCGAAGAAATACCTAGTTGGACTTAATTAATGAATTTTCTTTTTTAAATATAGCAAAAGTAATCAAAATATTTATAAATATAGCAAAATTTTACCGTTTATCGCTATAGACTATTTGTGTCACGATAGAAGATAATAGTCTATCACGGTCTATCGCAAATTAACAGTATATTTTACTATTAATTGTAAATATTTTTAACAGTTTTGTCATTTAAGATAATTTTTCATAAATGTTTTAGTGTCATAATTCAATATTTTGTATTTAAATGAAAAGGAAAGGATGGTTGTATTAAATAATTATAGATGAAATATTGTATCTTACCCATATAATCAAAGTCTTTTAATTTATAAACTTATTTTTTTTAGTACCATTCTTATGGTTTGATGAAAATTTATTTGAGTTGAATATATATATTTTGGTTATATCAAAGACTCTTTTCAGTCAGTTTCATTTTATTTTAAATTTGAATACTTAAATTATCAAATTGGAGTATAGTACTTTTTTATGTCAATTAAATTATGTTTATTTTGGTGAGTATTTTTTTTATTAAATTCAATATGATAATTTAATTTTGAGTTTAAATTAATAAACTGAAAATTTTATGATATATATATATATATATATATTTTAAAAAGAAAAATCATTACACTTTAAAAGGTACACTAGAAAAAGAAAGAATGTTGTGAATAACATGGATTTAAATCAATCCCAATTTGAAAGGAAAACATAGTGGTTTATGCCAAAAGGGAAAAAAAAAAAAAAAAAAACATGGTGGTGGTGATTGATTTAACATGCCACACTTTGTGTTAGTTTGGTGGGAGGAAAAAGGAATGAAAATGAGAGAAAATTTGATAAAATTAGAAAATGGGTTATATATTGAGATTATTTTAAATGATAAAAATTATTTAAAATATTTAAAAATAATAGTAAAATATCACAGTATATCGCAAATAGATTGTGATAGACTACTATCTATGTCTATTTCTGAGGTCTATCACATATAGATGGTAAGATTTGCTATATTTATAAATATTTTGAATTATTTTTTTATATTAAAAAACAACCTTTATATATAAATTATTATTATAAAATTATACAGTAATGTATTATTAATTATTATTAGAAAATTATATAGTAATGTATGATGGTGATGATTTCCTCCCACCTGGTGGCACTGTCACTTTCATTAATGTTATTATTTTTTTTTAAAGATATCCTTTGCCTTCCATAGCCATGACCTAACTCTCTACTACCTTTTCTCACACAACTTTAATTCCCACCCATTTAATATTAAATTCAAATTTCAAATCATCATATTTGTATTCAATTGTTTTGTTTTTCCTTCCAAGACTATCTTAATTAACGATTCACTATATAATAATTTGTCAAATAATTATATTTTCTGTAATATGATATATGGTAAGGGTTTAAACCAATAGTAGTTTGTGCACATTTTGATTAAAACATTTAGCCTTAAATTTCTGAATTAAATGTATTGATTATTTATTATTATTATTATTTTATTGTTGGGTATGATGTAGACTTGGCGAAGAACAGTGGAAGGAGCATCAAAGGTGTTATTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTGATATTTTCTTTTTTTTTTCTTTCCTCTCTTTACTTGCCATTGTTAAATTATTAGAGGAGGCTGAAATCTCCATTTTACCCTCCTTATATTATCTTATCTTATCTTAATGCCATTTTATTTATTTATTTATTTATTTA CTCACTCTACATTTTCCCAATTTCTATTTTTTTCTCTCTCTAGAATTATGGATTCTTCAATTGGCAATGTTCAGCTTGTTCCCAGAAAGTCCTCCGACGAGCTTTTGAGGAAATTTGCTGAGGTGGGATCGGAGTCCGGCGGCGGAAGGAGGCTGTTGACGGTGGTTAAGAGACGGCGGAAGAGGGTTAATGAGGAGTGCGATAGCCCCTCCGGCGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCGGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGACTTGGCGAAGAACAGTGGAAGGAGCATCAAAGGTGTTATTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTGATATTTTCTTTTTTTTTTCTTTCCTCTCTTTACTTGCCATTGTTAAATTATTAGAGGAGGCTGAAATCTCCATTTTACCCTCCTTATATTATCTTATCTTATCTTAATGCCATTTTATTTATTTATTTATTTATTTA ATGGATTCTTCAATTGGCAATGTTCAGCTTGTTCCCAGAAAGTCCTCCGACGAGCTTTTGAGGAAATTTGCTGAGGTGGGATCGGAGTCCGGCGGCGGAAGGAGGCTGTTGACGGTGGTTAAGAGACGGCGGAAGAGGGTTAATGAGGAGTGCGATAGCCCCTCCGGCGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCGGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGACTTGGCGAAGAACAGTGGAAGGAGCATCAAAGGTGTTATTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTGA MDSSIGNVQLVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNEECDSPSGGGVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
BLAST of ClCG10G017530.1 vs. TrEMBL
Match: A0A0A0LGY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807310 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 1.6e-63 Identity = 132/137 (96.35%), Postives = 132/137 (96.35%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. TrEMBL
Match: A0A067G5S0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035775mg PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-29 Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. TrEMBL
Match: V4SVT8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013031mg PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-29 Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. TrEMBL
Match: A0A067JX98_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25541 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.7e-29 Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. TrEMBL
Match: A0A061EXT9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024909 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-28 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. TAIR10
Match: AT2G42110.1 (AT2G42110.1 unknown protein) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-17 Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. NCBI nr
Match: gi|659084750|ref|XP_008443054.1| (PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo]) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-65 Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. NCBI nr
Match: gi|449437583|ref|XP_004136571.1| (PREDICTED: uncharacterized protein LOC101222384 [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 2.4e-63 Identity = 132/137 (96.35%), Postives = 132/137 (96.35%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. NCBI nr
Match: gi|1009161539|ref|XP_015898954.1| (PREDICTED: uncharacterized protein LOC107432346 [Ziziphus jujuba]) HSP 1 Score: 138.3 bits (347), Expect = 1.0e-29 Identity = 78/139 (56.12%), Postives = 100/139 (71.94%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. NCBI nr
Match: gi|567874581|ref|XP_006429880.1| (hypothetical protein CICLE_v10013031mg [Citrus clementina]) HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29 Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of ClCG10G017530.1 vs. NCBI nr
Match: gi|802750318|ref|XP_012087768.1| (PREDICTED: uncharacterized protein LOC105646517 [Jatropha curcas]) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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