ClCG10G002880.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG10G002880.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=133
LocationCG_Chr10 : 3428580 .. 3429002 (-)
Sequence length423
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCATCCAACAAAACCACCTCCTCACTTGCTCTCTTTTTCTGCCTCAACATTCTCTTCTTCTCCGTAGTCACTGCTCAGATAGTAATTCCTACCCCCGCCGTCGGTGGCCCCGTCATAGGCTCACCAGCCGCTGACGCTCCTAGTCCTACCGCCGGAGCTAATTGCCCTAAAAATTTCATCGAGATAGTTTCTTGTACAGCTGTTCTTAACAGCTTTAATCTTTTTCCTTTCCTTCCACCCGTACCTTGTTGCGTGTTGTCTCGAGAGCTACCTGACCGTGAAGCTGTTGCTTGTCTTTGCCTTGCAATCAAACGTAATATTGTGAGCATTAGCAATCCAAACAGACCCATTACTCCAAATCGACTTCTTAACGCATGTGGCAGAAATAATGCTACTAACGGATCCCAATGTCCCTAA

mRNA sequence

ATGGCTTCATCCAACAAAACCACCTCCTCACTTGCTCTCTTTTTCTGCCTCAACATTCTCTTCTTCTCCGTAGTCACTGCTCAGATAGTAATTCCTACCCCCGCCGTCGGTGGCCCCGTCATAGGCTCACCAGCCGCTGACGCTCCTAGTCCTACCGCCGGAGCTAATTGCCCTAAAAATTTCATCGAGATAGTTTCTTGTACAGCTGTTCTTAACAGCTTTAATCTTTTTCCTTTCCTTCCACCCGTACCTTGTTGCGTGTTGTCTCGAGAGCTACCTGACCGTGAAGCTGTTGCTTGTCTTTGCCTTGCAATCAAACGTAATATTGTGAGCATTAGCAATCCAAACAGACCCATTACTCCAAATCGACTTCTTAACGCATGTGGCAGAAATAATGCTACTAACGGATCCCAATGTCCCTAA

Coding sequence (CDS)

ATGGCTTCATCCAACAAAACCACCTCCTCACTTGCTCTCTTTTTCTGCCTCAACATTCTCTTCTTCTCCGTAGTCACTGCTCAGATAGTAATTCCTACCCCCGCCGTCGGTGGCCCCGTCATAGGCTCACCAGCCGCTGACGCTCCTAGTCCTACCGCCGGAGCTAATTGCCCTAAAAATTTCATCGAGATAGTTTCTTGTACAGCTGTTCTTAACAGCTTTAATCTTTTTCCTTTCCTTCCACCCGTACCTTGTTGCGTGTTGTCTCGAGAGCTACCTGACCGTGAAGCTGTTGCTTGTCTTTGCCTTGCAATCAAACGTAATATTGTGAGCATTAGCAATCCAAACAGACCCATTACTCCAAATCGACTTCTTAACGCATGTGGCAGAAATAATGCTACTAACGGATCCCAATGTCCCTAA

Protein sequence

MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPVPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
Homology
[Close]
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-16
Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 1 

Query: 5   NKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEI 64
           +K ++S+ALFF LNILFF++V++    P P    P         P P+AG  CP++ +++
Sbjct: 3   SKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAG-KCPRDALKL 62

Query: 65  VSCTAVLNSFN--LFPFLPPVPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPN 124
             C  VLN  +  +    P +PCC L   L + EA  CLC AIK NI+   N N PI  +
Sbjct: 63  GVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPIALS 122

Query: 125 RLLNACGRNNATNGSQC 140
            +LN CG+    NG +C
Sbjct: 123 LVLNNCGK-QVPNGFEC 136

[Close]
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match: AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana GN=AIR1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.5e-15
Identity = 55/130 (42.31%), Postives = 63/130 (48.46%), Query Frame = 1 

Query: 11  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAV 70
           LALF  LN+LFF+  +A                        T G  CPKN IEI +C  V
Sbjct: 7   LALFVSLNLLFFTYTSA------------------------TTGT-CPKNSIEIGTCVTV 66

Query: 71  LNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACG 130
           LN  +L    PPV PCC L + L D EA  CLC A+K +I+ I N N PI  + LLN C 
Sbjct: 67  LNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKASILGIVNINLPINLSVLLNVCS 110

Query: 131 RNNATNGSQC 140
           R NA    QC
Sbjct: 127 R-NAPKSFQC 110

[Close]
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.9e-13
Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIV------------------IPTP---AVGGPVIG 63
           ++K ++S+ALFF LNI+FF++  A                     +P+P    V  P + 
Sbjct: 2   ASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVP 61

Query: 64  SPAADAPSPT---------AGANCPKNFIEIVSCTAVLNSFNLFPFLPP--VPCCVLSRE 123
           SP+  +P+P          +  NCP + + +  C  VL+S        P   PCC L + 
Sbjct: 62  SPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQG 121

Query: 124 LPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC 140
           L D +A  CLC A++ N++ I N N PI+ + LLN C R    +G QC
Sbjct: 122 LVDLDAAICLCTALRANVLGI-NLNVPISLSVLLNVCNR-KVPSGFQC 167

[Close]
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-11
Identity = 53/161 (32.92%), Postives = 77/161 (47.83%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIV----------IPTP---AVGGPVIGSPAADAPS 63
           ++K ++SLALFF LNILFF++  A             +P+P    V  P    P+  +P+
Sbjct: 2   ASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPN 61

Query: 64  PTA----------GANCPKNFIEIVSCTAVLNSFNLFPFLPP--VPCCVLSRELPDREAV 123
           P            G +CP + +++  C  VL+S        P    CC L + L D +A 
Sbjct: 62  PRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAA 121

Query: 124 ACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC 140
            CLC A++ N++ I N N PI+ + LLN C R    +G QC
Sbjct: 122 ICLCTALRANVLGI-NLNVPISLSVLLNVCNR-KLPSGFQC 160

[Close]
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 58/177 (32.77%), Postives = 70/177 (39.55%), Query Frame = 1 

Query: 1   MASSNKTTSSLALFFCLNILFFSVVTA----------QIVIPTPAVGGPVIGSPAADAPS 60
           MAS N T  SLALFF LNILFF++ TA             +P+P V  P   SP+  +PS
Sbjct: 1   MASKNST--SLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPS 60

Query: 61  -PTAGANCPKNFIEIVSCTAVLNSFNLFPFLPP-----------------VPCCVLSRE- 120
            PT     P         T  + S N  P  PP                 V   VLS   
Sbjct: 61  VPTPSVPTPS------VPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLL 120

Query: 121 ------------------LPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGR 131
                             L D +A  CLC A++ N++ I N N PI+ + LLN C R
Sbjct: 121 NVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGI-NLNVPISLSVLLNVCNR 168

[Close]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match: A0A0A0L6Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G027200 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 96/142 (67.61%), Postives = 107/142 (75.35%), Query Frame = 1 

Query: 1   MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPK 60
           MASSNKTT SLALFFCLNILFF +VTA Q V PT  +G P +GS   DAPSP+    CPK
Sbjct: 1   MASSNKTTPSLALFFCLNILFFPLVTAHQPVNPTFIIGDPFVGSSIFDAPSPSGSNFCPK 60

Query: 61  NFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRP 120
           N  +I  C A LN FNLFP FLPP  CC+L R L D EAVACLC AIK N+V+IS  NRP
Sbjct: 61  NVFQIAYCAAQLNPFNLFPRFLPPFSCCLLIRRLSDPEAVACLCNAIKSNVVNISIRNRP 120

Query: 121 ITPNRLLNACGRNNATNGSQCP 141
           +TPNR+LNAC RN+ATNGSQCP
Sbjct: 121 MTPNRILNACSRNDATNGSQCP 142

[Close]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match: A0A061G5A9_THECC (14 kDa proline-rich protein DC2.15, putative OS=Theobroma cacao GN=TCM_016003 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-18
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTA--QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNF 63
           ++K ++SLALFF LNILFFS+V+A      P P        SP+   P+P+ G  CP++ 
Sbjct: 2   ASKRSASLALFFALNILFFSLVSACGSCPSPKPKPKPTPCSSPSTPCPTPSGGGKCPRDA 61

Query: 64  IEIVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPI 123
           +++  C  +L    N+    PPV PCC L + L D EA  CLC AIK NI+ I N N P+
Sbjct: 62  LKLGICADLLGGLLNVTVGKPPVQPCCSLIQGLADLEAAVCLCTAIKANILGI-NLNIPV 121

Query: 124 TPNRLLNACGRNNATNGSQC 140
           + + LLN C + N  +G QC
Sbjct: 122 SLSLLLNVCSK-NVPSGFQC 139

[Close]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match: A0A0D2RQL8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199800 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.4e-18
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++S+ALFF LNILFFS+V+A    P+P             +P+P A   CP N ++
Sbjct: 2   ASKRSASVALFFALNILFFSLVSANCSCPSPKP-----KPNPTPSPTPAAEGKCPINTLK 61

Query: 64  IVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPN 123
           +  C  VL   N+    PPV PCC L + L D EA  CLC AIK NI+ I N N P++ +
Sbjct: 62  LGVCAEVLGLVNVTVGSPPVQPCCTLLKGLADLEAAVCLCTAIKGNILGI-NLNIPVSLS 121

Query: 124 RLLNACGRNNATNGSQCP 141
            LLN C +    +G QCP
Sbjct: 122 LLLNVCSK-KVPSGFQCP 132

[Close]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match: A0A0D2QW64_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199900 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 59/138 (42.75%), Postives = 80/138 (57.97%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++SLALFF LNILFFS+V+A    P+P              PSP+A   CP++ ++
Sbjct: 2   ASKRSASLALFFALNILFFSLVSACDSCPSPKP-----RPKPTPFPSPSAKGKCPRDALK 61

Query: 64  IVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPN 123
           +  C  VL   N+    PPV PCC L + L D EA  CLC AIK N++ I N N P++ +
Sbjct: 62  LGVCANVLGLVNVTIGSPPVQPCCSLLQGLADLEAAVCLCTAIKANVLGI-NLNVPVSLS 121

Query: 124 RLLNACGRNNATNGSQCP 141
            LLN C R    +G QCP
Sbjct: 122 LLLNVCSR-KVPSGFQCP 132

[Close]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match: A0A0D2T7W1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G027700 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++S+A F  LNILFFS+V+A     +P        +P    P+P+A   CP++ ++
Sbjct: 2   ASKKSASMAFFLALNILFFSLVSACGSCSSPTPKPRPNPNPNTPTPTPSARGRCPRDALK 61

Query: 64  IVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPN 123
           +  C  VLN  N+    PPV PCC L   L D EA ACLC AI+ NI+ I N N P++ +
Sbjct: 62  LGVCANVLNLVNVTVGSPPVMPCCSLLNGLVDLEAAACLCTAIRANILGI-NLNIPVSLS 121

Query: 124 RLLNACGRNNATNGSQC 140
            LLN C RN  T G QC
Sbjct: 122 LLLNVCSRNVPT-GFQC 136

[Close]
BLAST of ClCG10G002880.1 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 58/138 (42.03%), Postives = 77/138 (55.80%), Query Frame = 1 

Query: 8   TSSLALFFCLNILFFSVVTAQIVIPTPAVGG---PVIGSPAADAPSPTAGAN-CPKNFIE 67
           +SS+ALF  LN+LFF+ ++A     TP  GG   P         PSP++G++ CPK+ ++
Sbjct: 3   SSSIALFLALNLLFFTTISA-CGSCTPCGGGCPSPKPKPTPKPTPSPSSGSSKCPKDTLK 62

Query: 68  IVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITP 127
           +  C  VLN   +L    PPV PCC L + L D EA  CLC A+K NI+ I N N PI+ 
Sbjct: 63  LGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGI-NLNLPISL 122

Query: 128 NRLLNACGRNNATNGSQC 140
           + LLN C +     G QC
Sbjct: 123 SLLLNVCSK-QLPPGFQC 137

[Close]
BLAST of ClCG10G002880.1 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-16
Identity = 59/150 (39.33%), Postives = 77/150 (51.33%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTA--QIVIPTPAVGGPVIGSPAADA---PSPT------ 63
           +++TT SLALF  LN LFF+ ++A      P+P        SP       P PT      
Sbjct: 2   ASRTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSPS 61

Query: 64  -AGANCPKNFIEIVSCTAVLNSF-NLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNI 123
            A A CP++ +++  C  VLN   N+    PPV PCC L + L D EA ACLC A+K NI
Sbjct: 62  PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKANI 121

Query: 124 VSISNPNRPITPNRLLNACGRNNATNGSQC 140
           + I N N P++ + LLN C +     G QC
Sbjct: 122 LGI-NLNIPLSLSLLLNVCSK-KVPRGFQC 149

[Close]
BLAST of ClCG10G002880.1 vs. TAIR10
Match: AT4G12550.1 (AT4G12550.1 Auxin-Induced in Root cultures 1)

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-16
Identity = 55/130 (42.31%), Postives = 63/130 (48.46%), Query Frame = 1 

Query: 11  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAV 70
           LALF  LN+LFF+  +A                        T G  CPKN IEI +C  V
Sbjct: 7   LALFVSLNLLFFTYTSA------------------------TTGT-CPKNSIEIGTCVTV 66

Query: 71  LNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACG 130
           LN  +L    PPV PCC L + L D EA  CLC A+K +I+ I N N PI  + LLN C 
Sbjct: 67  LNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKASILGIVNINLPINLSVLLNVCS 110

Query: 131 RNNATNGSQC 140
           R NA    QC
Sbjct: 127 R-NAPKSFQC 110

[Close]
BLAST of ClCG10G002880.1 vs. TAIR10
Match: AT4G12520.1 (AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++SL +F   NILFF++ TA         GG    +P    P P +  +CPK+ ++
Sbjct: 2   ASKISASLVIFLTFNILFFTLTTA--------CGGGCSSTPKPK-PKPKSTGSCPKDTLK 61

Query: 64  IVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITP 123
           +  C  VL          PPV PCC L   L D EA ACLC A+K  ++ I N N P++ 
Sbjct: 62  LGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGI-NLNVPVSL 120

Query: 124 NRLLNACGR 131
           + LLN CG+
Sbjct: 122 SLLLNVCGK 120

[Close]
BLAST of ClCG10G002880.1 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++SL +F   NILFF++ TA         GG    +P    P P +  +CPK+ ++
Sbjct: 2   ASKISASLVIFLTFNILFFTLTTA--------CGGGCSSTPKPK-PKPKSTGSCPKDTLK 61

Query: 64  IVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITP 123
           +  C  VL          PPV PCC L   L D EA ACLC A+K  ++ I N N P++ 
Sbjct: 62  LGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGI-NLNVPVSL 120

Query: 124 NRLLNACGR 131
           + LLN CG+
Sbjct: 122 SLLLNVCGK 120

[Close]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match: gi|659096580|ref|XP_008449172.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-49
Identity = 98/141 (69.50%), Postives = 111/141 (78.72%), Query Frame = 1 

Query: 1   MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKN 60
           MASSNKTT+SLALFFCLNILFFS+VTAQ VIPT  +G P++GS   DAPSP+    CPK 
Sbjct: 1   MASSNKTTTSLALFFCLNILFFSLVTAQPVIPTFLIGDPIVGSSIFDAPSPSGSNFCPKT 60

Query: 61  FIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPI 120
            I+I SC A LN FNLFP F PP+PCC+L   LPD E VACLC AIK N+V+IS  NRP+
Sbjct: 61  IIQIASCAAQLNLFNLFPSFFPPIPCCLLIERLPDPEGVACLCNAIKSNVVNISIRNRPM 120

Query: 121 TPNRLLNACGRNNATNGSQCP 141
           TPNR+LNAC RNNA NGSQCP
Sbjct: 121 TPNRILNACRRNNAANGSQCP 141

[Close]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match: gi|449466209|ref|XP_004150819.1| (PREDICTED: putative lipid-binding protein AIR1B [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 96/142 (67.61%), Postives = 107/142 (75.35%), Query Frame = 1 

Query: 1   MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPK 60
           MASSNKTT SLALFFCLNILFF +VTA Q V PT  +G P +GS   DAPSP+    CPK
Sbjct: 1   MASSNKTTPSLALFFCLNILFFPLVTAHQPVNPTFIIGDPFVGSSIFDAPSPSGSNFCPK 60

Query: 61  NFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRP 120
           N  +I  C A LN FNLFP FLPP  CC+L R L D EAVACLC AIK N+V+IS  NRP
Sbjct: 61  NVFQIAYCAAQLNPFNLFPRFLPPFSCCLLIRRLSDPEAVACLCNAIKSNVVNISIRNRP 120

Query: 121 ITPNRLLNACGRNNATNGSQCP 141
           +TPNR+LNAC RN+ATNGSQCP
Sbjct: 121 MTPNRILNACSRNDATNGSQCP 142

[Close]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match: gi|590676958|ref|XP_007039886.1| (14 kDa proline-rich protein DC2.15, putative [Theobroma cacao])

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTA--QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNF 63
           ++K ++SLALFF LNILFFS+V+A      P P        SP+   P+P+ G  CP++ 
Sbjct: 2   ASKRSASLALFFALNILFFSLVSACGSCPSPKPKPKPTPCSSPSTPCPTPSGGGKCPRDA 61

Query: 64  IEIVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPI 123
           +++  C  +L    N+    PPV PCC L + L D EA  CLC AIK NI+ I N N P+
Sbjct: 62  LKLGICADLLGGLLNVTVGKPPVQPCCSLIQGLADLEAAVCLCTAIKANILGI-NLNIPV 121

Query: 124 TPNRLLNACGRNNATNGSQC 140
           + + LLN C + N  +G QC
Sbjct: 122 SLSLLLNVCSK-NVPSGFQC 139

[Close]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match: gi|658000267|ref|XP_008392581.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Malus domestica])

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18
Identity = 61/138 (44.20%), Postives = 81/138 (58.70%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++KTTSSLALF  LN+ FF++V++    P P        +P    PSP+ G +CP++ ++
Sbjct: 2   ASKTTSSLALFLALNLFFFALVSSCGTCPNPNPKPRPKPNP-TPKPSPSTGTSCPRDTLK 61

Query: 64  IVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITP 123
           +  C  VLN   N+    PPV PCC L + L D EA  CLC AIK NI+ I N N PI+ 
Sbjct: 62  LGVCANVLNGLLNITIGKPPVEPCCSLIQGLADLEAAVCLCTAIKANILGI-NLNIPISL 121

Query: 124 NRLLNACGRNNATNGSQC 140
           + LLN CG N    G QC
Sbjct: 122 SLLLNVCG-NKVPKGFQC 136

[Close]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match: gi|823152214|ref|XP_012475939.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii])

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 1 

Query: 4   SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIE 63
           ++K ++S+ALFF LNILFFS+V+A    P+P             +P+P A   CP N ++
Sbjct: 2   ASKRSASVALFFALNILFFSLVSANCSCPSPKP-----KPNPTPSPTPAAEGKCPINTLK 61

Query: 64  IVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPN 123
           +  C  VL   N+    PPV PCC L + L D EA  CLC AIK NI+ I N N P++ +
Sbjct: 62  LGVCAEVLGLVNVTVGSPPVQPCCTLLKGLADLEAAVCLCTAIKGNILGI-NLNIPVSLS 121

Query: 124 RLLNACGRNNATNGSQCP 141
            LLN C +    +G QCP
Sbjct: 122 LLLNVCSK-KVPSGFQCP 132

The following BLAST results are available for this feature:
BLAST of ClCG10G002880.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
14KD_DAUCA3.0e-1638.6914 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1[more]
AIR1_ARATH9.5e-1542.31Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana GN=AIR1 PE=2 SV=1[more]
ERLI1_ARATH8.9e-1331.55Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1[more]
ERLL1_ARATH4.9e-1132.92pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1[more]
ERLL3_ARATH1.2e-0632.77pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ... [more]
BLAST of ClCG10G002880.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6Y3_CUCSA1.4e-4467.61Uncharacterized protein OS=Cucumis sativus GN=Csa_3G027200 PE=4 SV=1[more]
A0A061G5A9_THECC6.4e-1842.1414 kDa proline-rich protein DC2.15, putative OS=Theobroma cacao GN=TCM_016003 PE... [more]
A0A0D2RQL8_GOSRA8.4e-1842.03Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199800 PE=4 SV=1[more]
A0A0D2QW64_GOSRA1.4e-1742.75Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199900 PE=4 SV=1[more]
A0A0D2T7W1_GOSRA1.4e-1742.34Uncharacterized protein OS=Gossypium raimondii GN=B456_007G027700 PE=4 SV=1[more]
BLAST of ClCG10G002880.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12090.11.4e-1642.03 extensin-like protein[more]
AT1G62510.12.4e-1639.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT4G12550.15.4e-1642.31 Auxin-Induced in Root cultures 1[more]
AT4G12520.11.0e-1437.21 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT4G12510.11.0e-1437.21 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of ClCG10G002880.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096580|ref|XP_008449172.1|5.9e-4969.50PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo][more]
gi|449466209|ref|XP_004150819.1|2.0e-4467.61PREDICTED: putative lipid-binding protein AIR1B [Cucumis sativus][more]
gi|590676958|ref|XP_007039886.1|9.2e-1842.1414 kDa proline-rich protein DC2.15, putative [Theobroma cacao][more]
gi|658000267|ref|XP_008392581.1|9.2e-1844.20PREDICTED: 14 kDa proline-rich protein DC2.15-like [Malus domestica][more]
gi|823152214|ref|XP_012475939.1|1.2e-1742.03PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR027923Hydrophob_seed
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG10G002880ClCG10G002880gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG10G002880.1ClCG10G002880.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG10G002880.1.cds1ClCG10G002880.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 60..140
score: 4.37
IPR027923Hydrophobic seed proteinPFAMPF14547Hydrophob_seedcoord: 57..140
score: 5.8
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 56..140
score: 5.9
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 1..131
score: 6.7