ClCG10G002800.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G002800.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Terpene synthase
Location	CG_Chr10 : 3301353 .. 3303279 (-)
Sequence length	576

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTAAATGACTTAATTCTTTGCACCATATCTCAGATGAAAATGCAGGCAAAGTATTTCTTTATTGAAGCTAAATGGTATAATGATGGCCATACACCAACAATAAAGGAGTACTTGAGAATTGCAAGAGTAGCTTGCTACTATTTGCTTCCTACCTTTTCAATTCTTGGCATGGCAAATGATGCTTCAATTGAGGCATTAAAATGGATCAAGAATGACCCCAAATCACTTATTGCCTCGGGAGTTATTACCCGAATCATGAACGATATAACTTCTCATGAGGTACCTATGAATTTGTATCGTAACATCTTCGTTTTTTGTTTCTTGTTTTTTAAAGTAATTATACTATTAATCTGATTCTTGCTATGTCAATTTGAACACTTAAAGTTTTAAAGTCTTATTAGCATATGAGTCCAAACCTTCTACATAGTTATTTCCTTATTATTATTTAAAGCTCGTGACAATTTTATTTCCTTTTCTTTGAGTATTACTATAGCCATGAATATTGAGGATAATAATAGAAGGGAGAGTATTATTTAAAATAATAATAGTGATGTATTAGCAGAGTTCTACGGTGATTGATATCTACTTTTATTCTTTAAGATTGGAGGTTCAAATCCTGGTACCATTTTTTTCATCCTTGTATTTTGGTTCAATGAACCAAATATTTAACGAACTTAGTGTTATAATTTCAACTACTTAAAATCTAGAATTTTAATTTTGTTTGAACATAACTCAATTGGTTCATACCATGTACACTCGATCATGAGCTTTGATGTTTGTGATATCCATCCCTAGTATTGTATAAAAAAAACCTAAAATGTAATAAATGGTGAACACTAAATATATTACTTCACTCTCTTGAAAATCACGGTAGAAGAAAGAAAAACACAAATAACAATCAACAAGTCATCCAAATTTTAGGTCAATCCGAGCATAGTTAATTAGTAGATCATAAACACCAAATACCATCTATTGGTTGATAGTTTAACTTTTCACCCAAATTTATTGAATTTAAAGAATAAAATAATCACCAATAATTTAGTCGATAATAATACACAACCCAAAAGCCAATTAGCAAAATGACAAACACCCATCACAATCACAAAAATTAGCACCCTTGAAACCCATGAAATAATTTCCTTAACCATCAGAATGTTCAAAAGTCATAACTAGGTTTCAACTTGAAAAGATAAAAACTTAGCTAATTTTGAAAGCATTCATTATTATTGTTTTTTCATGTCAATTATCTTTGAACTAAACTCATTTTAGTAAAACATTCATTAGTTTATTATAGAAGTCAATTTAATGATATTAAAATTTTAATTAATATTGCTTTTGAAACATATAGCATATTATGTATATCGTATTAGATTTCCACCAACATATTAATATTTTCACATATTTATAGGTTTAACTTCAATATAAACTATTTTATCATATAAAAATGTAGCTAATGCGAATATAATATAAATAATAAATATTTTAATTTATTTTAAAAAGCATATAATATTTACTTACAAATTTAAATATTTTTTTGATTTGTTTTTTTAGAAATTTTCCAAATATCCATACCAACATCCGTATTTCTCTTGTTTGTGTTTTTAATATAATGTTTTGTTTGATTGTCTAGTTTGAGCAAGAGAGAGGTCATGTTGTTTCTGCGATGGAATGTTATATGACACAATATGGTGTATCAAAAAAAGAGGCTATAGAAGAATTAGAGAAGGAAGTTACCAATGCTTGGAAGAATATTATTGAAGATTATGTGCAATCTAGTGATGTTCCCTACACTATTTTCATGTGTGTTGTAAATCTTGCTCGAGTATCAAATCTCTTTTACAAGGATGAAGATGGATACACACATCCAAATGGAGAAATCAAACTTCTCATCACTTCTTTACTCGTTGATCCAATTCCAATTTGA

mRNA sequence

TCCTTAAATGACTTAATTCTTTGCACCATATCTCAGATGAAAATGCAGGCAAAGTATTTCTTTATTGAAGCTAAATGGTATAATGATGGCCATACACCAACAATAAAGGAGTACTTGAGAATTGCAAGAGTAGCTTGCTACTATTTGCTTCCTACCTTTTCAATTCTTGGCATGGCAAATGATGCTTCAATTGAGGCATTAAAATGGATCAAGAATGACCCCAAATCACTTATTGCCTCGGGAGTTATTACCCGAATCATGAACGATATAACTTCTCATGAGTTTGAGCAAGAGAGAGGTCATGTTGTTTCTGCGATGGAATGTTATATGACACAATATGGTGTATCAAAAAAAGAGGCTATAGAAGAATTAGAGAAGGAAGTTACCAATGCTTGGAAGAATATTATTGAAGATTATGTGCAATCTAGTGATGTTCCCTACACTATTTTCATGTGTGTTGTAAATCTTGCTCGAGTATCAAATCTCTTTTACAAGGATGAAGATGGATACACACATCCAAATGGAGAAATCAAACTTCTCATCACTTCTTTACTCGTTGATCCAATTCCAATTTGA

Coding sequence (CDS)

TCCTTAAATGACTTAATTCTTTGCACCATATCTCAGATGAAAATGCAGGCAAAGTATTTCTTTATTGAAGCTAAATGGTATAATGATGGCCATACACCAACAATAAAGGAGTACTTGAGAATTGCAAGAGTAGCTTGCTACTATTTGCTTCCTACCTTTTCAATTCTTGGCATGGCAAATGATGCTTCAATTGAGGCATTAAAATGGATCAAGAATGACCCCAAATCACTTATTGCCTCGGGAGTTATTACCCGAATCATGAACGATATAACTTCTCATGAGTTTGAGCAAGAGAGAGGTCATGTTGTTTCTGCGATGGAATGTTATATGACACAATATGGTGTATCAAAAAAAGAGGCTATAGAAGAATTAGAGAAGGAAGTTACCAATGCTTGGAAGAATATTATTGAAGATTATGTGCAATCTAGTGATGTTCCCTACACTATTTTCATGTGTGTTGTAAATCTTGCTCGAGTATCAAATCTCTTTTACAAGGATGAAGATGGATACACACATCCAAATGGAGAAATCAAACTTCTCATCACTTCTTTACTCGTTGATCCAATTCCAATTTGA

Protein sequence

SLNDLILCTISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVACYYLLPTFSILGMANDASIEALKWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIPI

Homology

[Close]

BLAST of ClCG10G002800.1 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.8e-40
Identity = 85/183 (46.45%), Postives = 118/183 (64.48%), Query Frame = 1


Query: 10  ISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIA-RVACYYLLPTFSILGMAND-ASIEAL 69
           I  +K  ++ +F EAKW N  + P+ KEY+ +A +   Y +L + S LG+ +   + E L
Sbjct: 388 IGGIKRLSESYFEEAKWLNKEYKPSFKEYMELALKTTGYTMLISISFLGLGDHIVTNEVL 447

Query: 70  KWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKE 129
           +W+ N P+ + AS +I R+M+DI SH+FEQER HV SA+ECYM QY  S++EA  EL KE
Sbjct: 448 QWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCSEEEACIELHKE 507

Query: 130 VTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVD 189
           V +AWK+  E + +  +VP  + M V+N +RV NL Y DEDGYT+     K LI SLLVD
Sbjct: 508 VVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSGTKFLIKSLLVD 567

Query: 190 PIP 191
           P+P
Sbjct: 568 PLP 570

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BLAST of ClCG10G002800.1 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-39
Identity = 80/180 (44.44%), Postives = 118/180 (65.56%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + ++ EAKW      PT++EY+ +A V + Y +L T S +GM +  + E+  WI 
Sbjct: 378 MKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAYSMLATTSFVGMGDAVTKESFDWIF 437

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           + PK + AS ++ R+M+D+  H+FEQ+RGHV SA+ECYM Q+G S++E   E  + V  A
Sbjct: 438 SKPKIVRASAIVCRLMDDMVFHKFEQKRGHVASAVECYMKQHGASEQETPNEFPQPVREA 497

Query: 133 WKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIPI 192
           WK+I E+ +  + VP  I M V+NLARV ++ YK+EDGYTH    +K  +TS+L+DP+PI
Sbjct: 498 WKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNEDGYTHFGAVLKDFVTSMLIDPVPI 557

[Close]

BLAST of ClCG10G002800.1 vs. Swiss-Prot
Match: TPS2_RICCO (Probable terpene synthase 2 OS=Ricinus communis GN=TPS2 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-38
Identity = 77/177 (43.50%), Postives = 112/177 (63.28%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVACYY-LLPTFSILGMANDASIEALKWIK 72
           MK   + + +EA W N  + PT+ EY+ IA V+C Y LL   S +GM + A+ E   W  
Sbjct: 373 MKKLVQAYLVEANWMNKNYVPTMDEYMSIALVSCAYPLLTVTSFVGMGDIATKEVFDWAS 432

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           NDPK +  + +I R+M+DI SHEFEQ+RGH+ S++ECYM Q GVS++   +E  K++ +A
Sbjct: 433 NDPKIVRVASIICRLMDDIVSHEFEQKRGHIASSVECYMKQNGVSEEATRDEFNKQIVDA 492

Query: 133 WKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDP 189
           WK+I E+++Q + VP      VVN AR+ +  YKD+D YTH    +K  + +LL+DP
Sbjct: 493 WKDINEEHLQPNYVPMPFRTRVVNSARIMDYLYKDDDEYTHVGELMKGSVAALLIDP 549

[Close]

BLAST of ClCG10G002800.1 vs. Swiss-Prot
Match: TPSGB_SOLHA ((E,E)-germacrene B synthase OS=Solanum habrochaites GN=SSTLH1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-38
Identity = 77/190 (40.53%), Postives = 119/190 (62.63%), Query Frame = 1


Query: 4   DLILCTISQMKMQAKYFFIEAKWYND-GHTPTIKEYLRIARVAC-YYLLPTFSILGMAND 63
           D +    ++MK   + +F E +W ND  H P  +E++  + V+  Y ++PT  ++GM   
Sbjct: 355 DRVYYAKNEMKKLVRAYFKETQWLNDCDHIPKYEEHMENSLVSGGYMMIPTTCLVGMEEF 414

Query: 64  ASIEALKWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAI 123
            SIE  +W+ NDP  + AS +I R MNDI  HE EQERGHV S +ECYM  YG SK+EA 
Sbjct: 415 ISIETFEWLMNDPLIVRASSLIARAMNDIVGHEVEQERGHVASLIECYMKDYGASKQEAY 474

Query: 124 EELEKEVTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLI 183
            + +K+VTNAWK+I +++ + ++VP  +   V+NL R +   YK++D YT+  G++K +I
Sbjct: 475 AKFKKDVTNAWKDINKEFFRPTEVPMFVLERVLNLTRAAEPLYKEKDAYTNAKGKLKNMI 534

Query: 184 TSLLVDPIPI 192
            S+L++ + I
Sbjct: 535 NSILIESVKI 544

[Close]

BLAST of ClCG10G002800.1 vs. Swiss-Prot
Match: STPS1_SANAL (Sesquiterpene synthase OS=Santalum album PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.4e-38
Identity = 80/178 (44.94%), Postives = 114/178 (64.04%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVAC-YYLLPTFSILGMANDASIEALKWIK 72
           MK   + +  EAKW ++ + PT +EY+ +A V   Y  L T S LGM   AS EA  W+ 
Sbjct: 380 MKKLVEGYMDEAKWCHEKYVPTFEEYMPVALVTSGYTFLTTISYLGMGEIASKEAFDWLF 439

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           + P  + AS  + R+M+D+ SH+FEQERGHV S +ECYM QYGV+++EA +E  K++  A
Sbjct: 440 SHPPVIEASESVCRLMDDMRSHKFEQERGHVASGIECYMKQYGVTEEEAHDEFRKQLVKA 499

Query: 133 WKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPI 190
           WK+I E+ ++   VP  + M ++NL RV ++ YK+EDGYTH    +K  I SLL+DP+
Sbjct: 500 WKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAMKDNIASLLIDPM 557

[Close]

BLAST of ClCG10G002800.1 vs. TrEMBL
Match: A0A0A0L6X1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G021130 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-60
Identity = 121/182 (66.48%), Postives = 144/182 (79.12%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEALKWIK 72
           MK QA+ +F EAKWY + +TPTI+EYLR+ R+ ACY L    S LGM N ASIEA +WI+
Sbjct: 372 MKRQARNYFFEAKWYKEEYTPTIEEYLRVGRITACYSLFSPISFLGMGNVASIEAFEWIE 431

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEE-LEKEVTN 132
           +DPKSLI +GVI RIMNDI SH+FEQERGHV SA+ECYM QY V +KEAI E LEK+V N
Sbjct: 432 SDPKSLIGAGVIGRIMNDIVSHKFEQERGHVASAVECYMMQYNVLEKEAIRELLEKQVAN 491

Query: 133 AWKNIIEDYVQS-SDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPI 192
           AWKNIIEDYV+S  DVP TIF  V+NLAR+S  FYKDEDGYT  +GE K ++ SL++DPI
Sbjct: 492 AWKNIIEDYVESIEDVPNTIFKSVLNLARLSETFYKDEDGYTCSDGETKRIVISLVLDPI 551

[Close]

BLAST of ClCG10G002800.1 vs. TrEMBL
Match: A0A0A0L1X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039850 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVA-CYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + +F EAKW+++G+ PT +EY+++A V+ CYYL    S +GM   AS EA +W++
Sbjct: 382 MKRQCRVYFEEAKWFHEGYVPTFEEYMKVAIVSTCYYLFVPISFVGMGIAASQEAFEWVE 441

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DP  L ASG++ R+MNDITSH++EQ+RGH+ SA+ECYM Q+ VS+++AI EL KE+T A
Sbjct: 442 SDPMLLKASGIVGRLMNDITSHKYEQKRGHMDSAVECYMKQHEVSEEDAIVELGKEITKA 501

Query: 133 WKNIIEDYV-QSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIP 192
           WK++IEDY+ +S+ +   I M V+NL R+S+LFYK EDGYT  +G+ K  ITS+L+DPIP
Sbjct: 502 WKDVIEDYIMKSTKLSNAILMRVLNLTRLSDLFYKKEDGYTFVHGDTKHFITSMLIDPIP 561

[Close]

BLAST of ClCG10G002800.1 vs. TrEMBL
Match: A0A0B4VFP0_CUCME (Sesquiterpene synthase Tps3 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 94/181 (51.93%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVA-CYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + +F EAKW+++G+ PT +EY+++A V+ C+Y+    S +GM   AS E  +W++
Sbjct: 342 MKRQCRAYFAEAKWFHEGYMPTFEEYMKVAIVSTCFYVYVPISFVGMGVAASQEVFEWVE 401

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DP  L ASG+I R+MNDITSH+FEQERGH+ SA+ECYM Q+ VS+++AI EL KE+T A
Sbjct: 402 SDPMLLKASGIIGRLMNDITSHKFEQERGHIDSAVECYMKQHEVSEEDAIIELAKEITKA 461

Query: 133 WKNIIEDYV-QSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIP 192
           WK++IEDY+ +S+ +   I M V+N  R+S  FYK EDGYT  +G+ K  IT++L+DPIP
Sbjct: 462 WKDMIEDYIMKSTKLSTAILMRVLNHGRLSEFFYKKEDGYTFVHGDTKHFITAMLIDPIP 521

[Close]

BLAST of ClCG10G002800.1 vs. TrEMBL
Match: A0A0A0L5V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G040860 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.1e-47
Identity = 97/182 (53.30%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDA-SIEALKWI 72
           MK Q + FF+EAKW+N+G+ PT++EY++++   A YY+  + S L + N+A S +  +W 
Sbjct: 1   MKNQCRAFFMEAKWFNEGYIPTVEEYMKVSITSAAYYVFASISFLTIGNNAASKQVYEWA 60

Query: 73  KNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTN 132
           + DP  L A+ VI R +NDI SH+FEQERGHV SA+ECYM QYGVS++EA+ EL+K+V N
Sbjct: 61  QTDPILLRATSVIGRFVNDIASHKFEQERGHVASAVECYMKQYGVSEEEAVTELQKQVVN 120

Query: 133 AWKNIIEDYVQSSDV-PYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPI 192
           AWK+IIEDY++SS + P  I   V+N+AR+S+LFYK+EDGYT  +GE K  IT +L +P+
Sbjct: 121 AWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEEDGYTFADGETKRFITLMLKNPM 180

[Close]

BLAST of ClCG10G002800.1 vs. TrEMBL
Match: A0A0A0L4K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G041370 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.9e-47
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVA-CYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + +F EAKW+ +G+ PT++EY+++A V+ CY+L    S +GM   AS EA +WI+
Sbjct: 211 MKRQCRVYFEEAKWFYEGYVPTMEEYMKVAIVSTCYHLFVQISFVGMGVAASQEAFQWIE 270

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DP  L ASG+I R++NDITSH+FEQ+RGH+ SA+ECYM QY VS++ A+ EL+KE+  A
Sbjct: 271 SDPMLLKASGIIGRLINDITSHQFEQQRGHIASAVECYMKQYEVSEEVAVIELQKEIEKA 330

Query: 133 WKNIIEDYV-QSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIP 191
           WK+ IEDY+ +S+     I M V+NLAR+S+ +YK EDGYT  +GE K  +T +L+DP+P
Sbjct: 331 WKDGIEDYIMKSTKFSNAILMRVLNLARLSDFYYKKEDGYTFSHGETKDFVTYMLIDPLP 390

[Close]

BLAST of ClCG10G002800.1 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21)

HSP 1 Score: 131.7 bits (330), Expect = 4.7e-31
Identity = 66/180 (36.67%), Postives = 112/180 (62.22%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVAC-YYLLPTFSILGMANDASIEALKWIK 72
           ++  A  +  EAKW    +  T  EY   A ++  YY L   + + M + A ++A +W+ 
Sbjct: 369 LQKTANGYMQEAKWLKKDYIATFDEYKENAILSSGYYALIAMTFVRMTDVAKLDAFEWLS 428

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           + PK  +AS +I+R  +DI+S+EFE +R HV + ++CYM Q+GVSK+ A+E +   V++A
Sbjct: 429 SHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDA 488

Query: 133 WKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIPI 192
           WK++ ++ ++    P+ + M V+NL+RV ++FY+ +D YT+P   +K  I SLL++ IPI
Sbjct: 489 WKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPK-LLKEHIVSLLIETIPI 547

[Close]

BLAST of ClCG10G002800.1 vs. TAIR10
Match: AT3G14490.1 (AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 64/188 (34.04%), Postives = 102/188 (54.26%), Query Frame = 1


Query: 5   LILCTISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVACYYLLPTFSILGMANDASI 64
           ++   + ++K   K +   +KW    H PT +EY+             +S + M +    
Sbjct: 414 IVQVAVDEIKKLGKAYLAISKWARASHVPTFEEYMEFGMQTSMDHFAAYSFIAMEDCDEN 473

Query: 65  EALKWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEEL 124
           +  +W K+ PK + A   + RI NDI + E E  RG V   + CYM Q+GVSK+EAI E+
Sbjct: 474 QTCEWYKSRPKMMEALNGVFRIKNDINTFEQEMSRGEVAKGLNCYMKQHGVSKEEAIGEM 533

Query: 125 EKEVTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPN-GEIKLLITS 184
            K  +N +K I+E+Y+ ++ VP  I +  +N++R  + FYK+ D +T P  G +K +ITS
Sbjct: 534 NKIYSNYYKIIMEEYLTTTAVPRPILVRCLNVSRPIHHFYKERDEFTDPYFGMLKEVITS 593

Query: 185 LLVDPIPI 192
           L + PIP+
Sbjct: 594 LFIHPIPL 601

[Close]

BLAST of ClCG10G002800.1 vs. TAIR10
Match: AT4G20200.1 (AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 9.8e-29
Identity = 65/184 (35.33%), Postives = 102/184 (55.43%), Query Frame = 1


Query: 9   TISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEAL 68
           TI + K  AK      KW    H P+ +EY+ +  V    Y       + M   A+ EA 
Sbjct: 421 TIEEFKAAAKANIDLEKWAQADHIPSFEEYMEVGEVEVTVYASLAGIFMSMGKMATKEAF 480

Query: 69  KWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKE 128
           +W+K+ PK +    +  R+MND+  +E +  RG+V +A+ CYM QYGV+K+EA  EL K 
Sbjct: 481 EWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGYVTNAVNCYMKQYGVTKEEAFRELYKI 540

Query: 129 VTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVD 188
           V  A K + E+++ ++ VP+ +    ++LAR+  + Y   +G+T+P G+IK  +TS+ VD
Sbjct: 541 VVAANKTLNEEFLSTTGVPHFLLKATIDLARMMTVAYNVNEGFTNPQGKIKEYMTSMFVD 600

Query: 189 PIPI 192
            I I
Sbjct: 601 QIHI 604

[Close]

BLAST of ClCG10G002800.1 vs. TAIR10
Match: AT1G33750.1 (AT1G33750.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-28
Identity = 60/187 (32.09%), Postives = 107/187 (57.22%), Query Frame = 1


Query: 9   TISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRI----ARVACYYLLPTFSILGMANDASI 68
           T+ ++K+  + +   +KW   GH PT  +Y+ +    + + C+ +   +S + M +    
Sbjct: 420 TVEEIKIMGRAYAEISKWARAGHVPTFDDYIELGLDSSGIRCFAM---YSFISMEDCEEN 479

Query: 69  EALKWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEEL 128
           +   W K+ PK L A  VI R+ NDI   E E  RG VV+ + CY+ Q+ V+K+ A+ E+
Sbjct: 480 QTNAWFKSKPKMLRALSVIFRLTNDIAGFEEEMRRGEVVNGVNCYVKQHNVTKELAVREI 539

Query: 129 EKEVTNAWKNIIEDYVQSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSL 188
           +K + + +K ++E+++    V   I +   N+ R+ NL+Y++ D +T+PNG++K LITSL
Sbjct: 540 KKMIRDNYKIMMEEFLTIKSVSRPILVRCFNIVRLVNLYYEEGDNFTNPNGKLKDLITSL 599

Query: 189 LVDPIPI 192
              P+P+
Sbjct: 600 FFHPLPL 603

[Close]

BLAST of ClCG10G002800.1 vs. TAIR10
Match: AT3G14540.1 (AT3G14540.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-28
Identity = 65/184 (35.33%), Postives = 104/184 (56.52%), Query Frame = 1


Query: 10  ISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEALK 69
           + + K+ AK +    +W   GH PT  EY+++  V A       +  +GM +    EA +
Sbjct: 418 LERFKIIAKAYKQLTEWARKGHVPTFDEYMKVGLVTAGMGDYAGYCFIGMEDINEKEAFE 477

Query: 70  WIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEV 129
           W+ ++P  + A  V+ RI ND+ ++E E  RG V + + CYM QYGV+K+EA  EL K  
Sbjct: 478 WLNSNPLLIDALNVLFRIANDVGTYETEINRGEVANGLNCYMKQYGVTKEEASRELRKMY 537

Query: 130 TNAWKNIIEDYVQSSD-VPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVD 189
               K ++E+++ S D VP  + +  +N AR+ ++ Y + DGY+ P G+I+  +TSL V 
Sbjct: 538 IYNKKVVVEEFMNSHDRVPRQVLLRCLNFARLFDVIYTEGDGYSEPKGKIEHFMTSLYVH 597

Query: 190 PIPI 192
           PIP+
Sbjct: 598 PIPL 601

[Close]

BLAST of ClCG10G002800.1 vs. NCBI nr
Match: gi|659095987|ref|XP_008448865.1| (PREDICTED: (-)-germacrene D synthase-like [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61
Identity = 120/182 (65.93%), Postives = 146/182 (80.22%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEALKWIK 72
           MK QA+Y+F EAKWY + +TPTI+EYLRI RV ACY L    S LGM N AS EA +WI+
Sbjct: 386 MKRQARYYFFEAKWYKEEYTPTIEEYLRIGRVTACYSLFSPISFLGMGNVASTEAFEWIE 445

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DPK+L+ SGVI RIMNDI SH+FEQERGHV SA+ECYM QY V +KEA +ELEK+VTNA
Sbjct: 446 SDPKALVGSGVIGRIMNDIVSHKFEQERGHVASAVECYMIQYNVPEKEARQELEKQVTNA 505

Query: 133 WKNIIEDYVQS--SDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPI 192
           WK+IIEDY++S  +DVP TIF  V+NLAR+S+ FYKDEDGYT   GE K +I SL++DP+
Sbjct: 506 WKDIIEDYIKSTENDVPNTIFKSVLNLARLSDTFYKDEDGYTCSGGETKRMIISLVLDPL 565

[Close]

BLAST of ClCG10G002800.1 vs. NCBI nr
Match: gi|778675433|ref|XP_004147250.2| (PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.5e-60
Identity = 121/182 (66.48%), Postives = 144/182 (79.12%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDASIEALKWIK 72
           MK QA+ +F EAKWY + +TPTI+EYLR+ R+ ACY L    S LGM N ASIEA +WI+
Sbjct: 372 MKRQARNYFFEAKWYKEEYTPTIEEYLRVGRITACYSLFSPISFLGMGNVASIEAFEWIE 431

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEE-LEKEVTN 132
           +DPKSLI +GVI RIMNDI SH+FEQERGHV SA+ECYM QY V +KEAI E LEK+V N
Sbjct: 432 SDPKSLIGAGVIGRIMNDIVSHKFEQERGHVASAVECYMMQYNVLEKEAIRELLEKQVAN 491

Query: 133 AWKNIIEDYVQS-SDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPI 192
           AWKNIIEDYV+S  DVP TIF  V+NLAR+S  FYKDEDGYT  +GE K ++ SL++DPI
Sbjct: 492 AWKNIIEDYVESIEDVPNTIFKSVLNLARLSETFYKDEDGYTCSDGETKRIVISLVLDPI 551

[Close]

BLAST of ClCG10G002800.1 vs. NCBI nr
Match: gi|778675684|ref|XP_011650453.1| (PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-49
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVA-CYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + +F EAKW+++G+ PT +EY+++A V+ CYYL    S +GM   AS EA +W++
Sbjct: 382 MKRQCRVYFEEAKWFHEGYVPTFEEYMKVAIVSTCYYLFVPISFVGMGIAASQEAFEWVE 441

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DP  L ASG++ R+MNDITSH++EQ+RGH+ SA+ECYM Q+ VS+++AI EL KE+T A
Sbjct: 442 SDPMLLKASGIVGRLMNDITSHKYEQKRGHMDSAVECYMKQHEVSEEDAIVELGKEITKA 501

Query: 133 WKNIIEDYV-QSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIP 192
           WK++IEDY+ +S+ +   I M V+NL R+S+LFYK EDGYT  +G+ K  ITS+L+DPIP
Sbjct: 502 WKDVIEDYIMKSTKLSNAILMRVLNLTRLSDLFYKKEDGYTFVHGDTKHFITSMLIDPIP 561

[Close]

BLAST of ClCG10G002800.1 vs. NCBI nr
Match: gi|778688338|ref|XP_004151461.2| (PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 98/187 (52.41%), Postives = 138/187 (73.80%), Query Frame = 1


Query: 8   CTISQMKMQAKYFFIEAKWYNDGHTPTIKEYLRIARV-ACYYLLPTFSILGMANDA-SIE 67
           C    MK Q + FF+EAKW+N+G+ PT++EY++++   A YY+  + S L + N+A S +
Sbjct: 343 CAKEAMKNQCRAFFMEAKWFNEGYIPTVEEYMKVSITSAAYYVFASISFLTIGNNAASKQ 402

Query: 68  ALKWIKNDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELE 127
             +W + DP  L A+ VI R +NDI SH+FEQERGHV SA+ECYM QYGVS++EA+ EL+
Sbjct: 403 VYEWAQTDPILLRATSVIGRFVNDIASHKFEQERGHVASAVECYMKQYGVSEEEAVTELQ 462

Query: 128 KEVTNAWKNIIEDYVQSSDV-PYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSL 187
           K+V NAWK+IIEDY++SS + P  I   V+N+AR+S+LFYK+EDGYT  +GE K  IT +
Sbjct: 463 KQVVNAWKDIIEDYMKSSKLFPSFILDHVLNVARLSDLFYKEEDGYTFADGETKRFITLM 522

Query: 188 LVDPIPI 192
           L +P+PI
Sbjct: 523 LKNPMPI 529

[Close]

BLAST of ClCG10G002800.1 vs. NCBI nr
Match: gi|745672490|gb|AJD19683.1| (sesquiterpene synthase Tps3 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-47
Identity = 94/181 (51.93%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 13  MKMQAKYFFIEAKWYNDGHTPTIKEYLRIARVA-CYYLLPTFSILGMANDASIEALKWIK 72
           MK Q + +F EAKW+++G+ PT +EY+++A V+ C+Y+    S +GM   AS E  +W++
Sbjct: 342 MKRQCRAYFAEAKWFHEGYMPTFEEYMKVAIVSTCFYVYVPISFVGMGVAASQEVFEWVE 401

Query: 73  NDPKSLIASGVITRIMNDITSHEFEQERGHVVSAMECYMTQYGVSKKEAIEELEKEVTNA 132
           +DP  L ASG+I R+MNDITSH+FEQERGH+ SA+ECYM Q+ VS+++AI EL KE+T A
Sbjct: 402 SDPMLLKASGIIGRLMNDITSHKFEQERGHIDSAVECYMKQHEVSEEDAIIELAKEITKA 461

Query: 133 WKNIIEDYV-QSSDVPYTIFMCVVNLARVSNLFYKDEDGYTHPNGEIKLLITSLLVDPIP 192
           WK++IEDY+ +S+ +   I M V+N  R+S  FYK EDGYT  +G+ K  IT++L+DPIP
Sbjct: 462 WKDMIEDYIMKSTKLSTAILMRVLNHGRLSEFFYKKEDGYTFVHGDTKHFITAMLIDPIP 521

The following BLAST results are available for this feature:

BLAST of ClCG10G002800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GCSY1_CUCME	6.8e-40	46.45	(+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1	[more]
TPSGD_VITVI	2.6e-39	44.44	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	[more]
TPS2_RICCO	1.7e-38	43.50	Probable terpene synthase 2 OS=Ricinus communis GN=TPS2 PE=3 SV=1	[more]
TPSGB_SOLHA	3.7e-38	40.53	(E,E)-germacrene B synthase OS=Solanum habrochaites GN=SSTLH1 PE=1 SV=1	[more]
STPS1_SANAL	6.4e-38	44.94	Sesquiterpene synthase OS=Santalum album PE=1 SV=1	[more]

BLAST of ClCG10G002800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6X1_CUCSA	2.4e-60	66.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G021130 PE=3 SV=1	[more]
A0A0A0L1X6_CUCSA	1.1e-49	53.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039850 PE=3 SV=1	[more]
A0A0B4VFP0_CUCME	1.8e-47	51.93	Sesquiterpene synthase Tps3 OS=Cucumis melo PE=2 SV=1	[more]
A0A0A0L5V3_CUCSA	3.1e-47	53.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G040860 PE=4 SV=1	[more]
A0A0A0L4K8_CUCSA	6.9e-47	51.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G041370 PE=3 SV=1	[more]

BLAST of ClCG10G002800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23960.1	4.7e-31	36.67	terpene synthase 21	[more]
AT3G14490.1	7.5e-29	34.04	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G20200.1	9.8e-29	35.33	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G33750.1	1.3e-28	32.09	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14540.1	3.7e-28	35.33	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

BLAST of ClCG10G002800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095987\|ref\|XP_008448865.1\|	2.4e-61	65.93	PREDICTED: (-)-germacrene D synthase-like [Cucumis melo]	[more]
gi\|778675433\|ref\|XP_004147250.2\|	3.5e-60	66.48	PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]	[more]
gi\|778675684\|ref\|XP_011650453.1\|	1.6e-49	53.59	PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]	[more]
gi\|778688338\|ref\|XP_004151461.2\|	1.2e-47	52.41	PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]	[more]
gi\|745672490\|gb\|AJD19683.1\|	2.6e-47	51.93	sesquiterpene synthase Tps3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005630	Terpene_synthase_metal-bd
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G002800	ClCG10G002800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G002800.1	ClCG10G002800.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G002800.1.cds2	ClCG10G002800.1.cds2	CDS
ClCG10G002800.1.cds1	ClCG10G002800.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 10..133 score: 1.0
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 6..190 score: 3.2
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 8..189 score: 2.65
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 12..191 score: 1.7
None	No IPR available	PANTHER	PTHR31225:SF15	ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASE	coord: 12..191 score: 1.7