ClCG08G010830.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACTGACCATTTCTGTTAACAGTTAATGCCCCAAGCCTCTTGGGTTCTTTCTTCTTCTTCTTCAATATCAGTTTGTTTGAGAGTTCGTAGTTGTGGAGCGAAAAGATGAGCAGTTTGAGGACGGTGTGCAGGCCTCATGCCATGTTTTCTTCCTTCCTCTTTAGCAGCAGATGCCAATCTATGCCCAGTGTTTCGTTTCGGAACCCTAATAACAAGCGTCGCTTTTCACTTTTCTCTCCCACCTTCAATTCCTCCTCAGGCTTTTCTCGAACCGAGAAGTGGTTCCGTATCAATCAGAGGAAGACGCTGGTCATGGCTTCCAATTGGGCTAACGAAAAATCTCCCTATGAAACTCTCGGTAATTTCCCTTTTCTCTCTCTTTTGGTTCCTTTTTTTTATAGCTCTTGTGATATTCATCATGGAAATCTTCGATTAGTAGTGCGTGAAGAAATTGGATTGTGTTAATGGAGCGAATATTGTCGTCATTGACTCTGTTTTTGATGATTTCAAGGATATTATTCTCAGTCGTTTAATAGTTAATGGAATACTTTTGCATATGCATCCCATTTAGTTGTCTATTGACTGATTTGGAACTTTTTCATTTGTTCTTTGGTACAATAAAAACAGAGTTAGAGAGGGATGCTGATGAAGAACAGATAAAGAGTTCCTATAGGCGCTTGGCCAAATTTTATCATCCGGATGGTTTGCTCCTTGCTCAAGTGAAACAATTGTGTAGTTTAAAGTTTCGCATGATTAAATTCATGAAGTTCATCATATCTTGAAAAAAAAAGAAAATCCTGAGATGTTCATCAATTTTGAGAAGGAAGGAAAGACAACTCTGCAATTAAAATACTAGACCATCTAAGTTAATCACATATTAAACCATTTCTAAGCTGGCTGGTAAGCCTATACTCCTTTGCCATTGAAACATAATCATTTCCAGTTACTAAATTTATTGGAGTTATGCATGAGAGTGATGAGATCAGTTCCCCCTCCCAAAATAAAATAAAATGAAACAAAGCTTGTTATTATTATTGTTATTATTAATATTTTGAAATGGAATCAAGTCTCTTCATTGAATTAATGAAATGAAACGAAGTTTGTTATTTATTTTTAGGTCTGAATTTAGCTAGGTTTATCATGGCTTTTCAAGTTTTATTTTGTTTTATGGAAGTATTGAGATCATTTTTTTGCAAGTTCTTACTGGTGCCGCTCTATGTGTCAATCAATATTGCCTTTCATACTACCCCCACACGAAAAAACTAAAGAAAGCTTCCTTTCTTCGTCTATGTTTCATGCTTGTGTTTGTTTAAATAGCTTACTTATGTAACTGTGAACTGGGTTCTTTCTTTTTTCAAAGTTTATGATGGTAGAGGAACTCTTGAAGAAGGAGAAACAGCTGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAGTTGCTCATAGATGATGAGAAGCGGAGGCAGTATGATGTAGATAACCGAGTTAATCCAATGAAGGTCTGATTTCATTTATGTAATAAAGTGAATTATAATTTTCAATGAATAGAGAGTAGCTTCATATTTGAGAGTTTCATTTTGTAGAGAGTATTTGATTGTCAAACAAATTGTCATCTGAGTTGCTTATAAATAGCCTATTCTGCTGATTAATAGGCATCTCAAGCATGGATGGAGTGGCTTATCAAAAAGCGCAAAGCTTTTGATCAACGGGGTGACATGGCAATAGTAGCTTGGGCTGAACAACAGCAGCGTGAGATGAATCTACGGGCTCGGCGCCTTTCTCGATCAAAGGTAGACCTTTGATGCGCACTTGATTATCATCTTTACATTTTGAAACCAATTCTGAAAAAAGAACTCGGGGGTTATCTTTTTCCCTCATTCTTATCTATCTCTCTCTACATTTGATATTTGAAAAGAGAAAAGAACTGAAGTTGGGAATTTCATCATGGAACACATCTTGTTTCTAAAGTGGATGGTATTGCAGGTTGATCCAGACGAAGAGAAAAGATTACTGGCAAAAGAAAAGAAGGCGTCAATAGAGTATTTTAACAGCACACTAAAGCGCCACACACTTATCTTGAAGAAGAGGGATTTAATGCGAAAAAAAGCAGAGGAGGAAAAGAAGAAGGTAATAAGGCAACTCTTAGCTGAGGAGGGCCTCGAGCTTGATACAGACGACGACGACAACCTGTAGATAATACATTGAATTTATTGGCCTCAAAGAAAATGCTGAACATATCGTTAGAAGAAACTGAAAGAGGAGCAGAGAAGAGTTTCTGCTTAGAATTCCCTCCAAAATACCATTAGTATTTGTTGTACAGAAGAATTGTATATACTATTTAGTTTACAGTCTAAAAGAAAGGAAAAATGATTCTTGCAAATGAAAATATGCCTCCCCCTCCCCCCAAGAAAAAACCACGTAGAATGTGCTCAATGTATTTTTTTTTT GAAAAACTGACCATTTCTGTTAACAGTTAATGCCCCAAGCCTCTTGGGTTCTTTCTTCTTCTTCTTCAATATCAGTTTGTTTGAGAGTTCGTAGTTGTGGAGCGAAAAGATGAGCAGTTTGAGGACGGTGTGCAGGCCTCATGCCATGTTTTCTTCCTTCCTCTTTAGCAGCAGATGCCAATCTATGCCCAGTGTTTCGTTTCGGAACCCTAATAACAAGCGTCGCTTTTCACTTTTCTCTCCCACCTTCAATTCCTCCTCAGGCTTTTCTCGAACCGAGAAGTGGTTCCGTATCAATCAGAGGAAGACGCTGGTCATGGCTTCCAATTGGGCTAACGAAAAATCTCCCTATGAAACTCTCGAGTTAGAGAGGGATGCTGATGAAGAACAGATAAAGAGTTCCTATAGGCGCTTGGCCAAATTTTATCATCCGGATGGTTTGCTCCTTGCTCAACTTACTTATGTAACTGTGAACTGGGTTCTTTCTTTTTTCAAAGTTTATGATGGTAGAGGAACTCTTGAAGAAGGAGAAACAGCTGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAGTTGCTCATAGATGATGAGAAGCGGAGGCAGTATGATGTAGATAACCGAGTTAATCCAATGAAGGCATCTCAAGCATGGATGGAGTGGCTTATCAAAAAGCGCAAAGCTTTTGATCAACGGGGTGACATGGCAATAGTAGCTTGGGCTGAACAACAGCAGCGTGAGATGAATCTACGGGCTCGGCGCCTTTCTCGATCAAAGGTTGATCCAGACGAAGAGAAAAGATTACTGGCAAAAGAAAAGAAGGCGTCAATAGAGTATTTTAACAGCACACTAAAGCGCCACACACTTATCTTGAAGAAGAGGGATTTAATGCGAAAAAAAGCAGAGGAGGAAAAGAAGAAGGTAATAAGGCAACTCTTAGCTGAGGAGGGCCTCGAGCTTGATACAGACGACGACGACAACCTGTAGATAATACATTGAATTTATTGGCCTCAAAGAAAATGCTGAACATATCGTTAGAAGAAACTGAAAGAGGAGCAGAGAAGAGTTTCTGCTTAGAATTCCCTCCAAAATACCATTAGTATTTGTTGTACAGAAGAATTGTATATACTATTTAGTTTACAGTCTAAAAGAAAGGAAAAATGATTCTTGCAAATGAAAATATGCCTCCCCCTCCCCCCAAGAAAAAACCACGTAGAATGTGCTCAATGTATTTTTTTTTT ATGAGCAGTTTGAGGACGGTGTGCAGGCCTCATGCCATGTTTTCTTCCTTCCTCTTTAGCAGCAGATGCCAATCTATGCCCAGTGTTTCGTTTCGGAACCCTAATAACAAGCGTCGCTTTTCACTTTTCTCTCCCACCTTCAATTCCTCCTCAGGCTTTTCTCGAACCGAGAAGTGGTTCCGTATCAATCAGAGGAAGACGCTGGTCATGGCTTCCAATTGGGCTAACGAAAAATCTCCCTATGAAACTCTCGAGTTAGAGAGGGATGCTGATGAAGAACAGATAAAGAGTTCCTATAGGCGCTTGGCCAAATTTTATCATCCGGATGGTTTGCTCCTTGCTCAACTTACTTATGTAACTGTGAACTGGGTTCTTTCTTTTTTCAAAGTTTATGATGGTAGAGGAACTCTTGAAGAAGGAGAAACAGCTGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAGTTGCTCATAGATGATGAGAAGCGGAGGCAGTATGATGTAGATAACCGAGTTAATCCAATGAAGGCATCTCAAGCATGGATGGAGTGGCTTATCAAAAAGCGCAAAGCTTTTGATCAACGGGGTGACATGGCAATAGTAGCTTGGGCTGAACAACAGCAGCGTGAGATGAATCTACGGGCTCGGCGCCTTTCTCGATCAAAGGTTGATCCAGACGAAGAGAAAAGATTACTGGCAAAAGAAAAGAAGGCGTCAATAGAGTATTTTAACAGCACACTAAAGCGCCACACACTTATCTTGAAGAAGAGGGATTTAATGCGAAAAAAAGCAGAGGAGGAAAAGAAGAAGGTAATAAGGCAACTCTTAGCTGAGGAGGGCCTCGAGCTTGATACAGACGACGACGACAACCTGTAG MSSLRTVCRPHAMFSSFLFSSRCQSMPSVSFRNPNNKRRFSLFSPTFNSSSGFSRTEKWFRINQRKTLVMASNWANEKSPYETLELERDADEEQIKSSYRRLAKFYHPDGLLLAQLTYVTVNWVLSFFKVYDGRGTLEEGETAEARFIKIQAAYELLIDDEKRRQYDVDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIVAWAEQQQREMNLRARRLSRSKVDPDEEKRLLAKEKKASIEYFNSTLKRHTLILKKRDLMRKKAEEEKKKVIRQLLAEEGLELDTDDDDNL
BLAST of ClCG08G010830.1 vs. Swiss-Prot
Match: DNAJ_BACWK (Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 34/99 (34.34%), Postives = 46/99 (46.46%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. Swiss-Prot
Match: DNAJ_FINM2 (Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328) GN=dnaJ PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07 Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) GN=dnaJ PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07 Identity = 37/93 (39.78%), Postives = 45/93 (48.39%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07 Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. Swiss-Prot
Match: DNAJ_BRADU (Chaperone protein DnaJ OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=dnaJ PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.2e-07 Identity = 33/87 (37.93%), Postives = 43/87 (49.43%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TrEMBL
Match: A0A0A0KH82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G399770 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 1.7e-134 Identity = 246/291 (84.54%), Postives = 259/291 (89.00%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TrEMBL
Match: W9SH24_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_021508 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.9e-112 Identity = 213/291 (73.20%), Postives = 239/291 (82.13%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TrEMBL
Match: A0A0B0PW52_GOSAR (Chaperone DnaJ OS=Gossypium arboreum GN=F383_16347 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.9e-112 Identity = 213/294 (72.45%), Postives = 241/294 (81.97%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TrEMBL
Match: A0A0D2NRD0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G219900 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.4e-112 Identity = 214/294 (72.79%), Postives = 239/294 (81.29%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TrEMBL
Match: A0A061FGE8_THECC (Chaperone DnaJ-domain superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034994 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 6.0e-111 Identity = 211/298 (70.81%), Postives = 240/298 (80.54%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TAIR10
Match: AT1G77930.1 (AT1G77930.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 370.9 bits (951), Expect = 7.0e-103 Identity = 194/296 (65.54%), Postives = 230/296 (77.70%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-09 Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein) HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07 Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TAIR10
Match: AT4G09350.1 (AT4G09350.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-07 Identity = 32/89 (35.96%), Postives = 42/89 (47.19%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. TAIR10
Match: AT5G59610.1 (AT5G59610.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07 Identity = 48/198 (24.24%), Postives = 78/198 (39.39%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. NCBI nr
Match: gi|778715761|ref|XP_004146779.2| (PREDICTED: chaperone protein dnaJ 20, chloroplastic [Cucumis sativus]) HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134 Identity = 246/291 (84.54%), Postives = 259/291 (89.00%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. NCBI nr
Match: gi|659089187|ref|XP_008445372.1| (PREDICTED: uncharacterized protein LOC103488426 isoform X1 [Cucumis melo]) HSP 1 Score: 476.9 bits (1226), Expect = 2.6e-131 Identity = 243/291 (83.51%), Postives = 256/291 (87.97%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. NCBI nr
Match: gi|703135364|ref|XP_010105853.1| (Chaperone protein DnaJ [Morus notabilis]) HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-112 Identity = 213/291 (73.20%), Postives = 239/291 (82.13%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. NCBI nr
Match: gi|728848198|gb|KHG27641.1| (Chaperone DnaJ [Gossypium arboreum]) HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-112 Identity = 213/294 (72.45%), Postives = 241/294 (81.97%), Query Frame = 1
BLAST of ClCG08G010830.1 vs. NCBI nr
Match: gi|823136309|ref|XP_012467911.1| (PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Gossypium raimondii]) HSP 1 Score: 413.3 bits (1061), Expect = 3.5e-112 Identity = 214/294 (72.79%), Postives = 239/294 (81.29%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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