ClCG08G002180.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G002180.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr08 : 4590609 .. 4592350 (-)
Sequence length	807

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGCCATGAGATTGAAAATTTTGTCTTAGTTTTCTCATTTTGTGATGAGAATTATGTAAATGTTAGTCTGAATATATTCTCATTCTTTTGGAATAAATTGGTGAAAGTGCAATTTCACATTTCATAACCCATAAATTTCTCTAAAAAATAAAATTTTATTTTCTTTCCCCACAAAAACAAAAGAACAAGGCCTCCATTTGAAAATGTGTTGCTTTTTACGAAGGATGTAATCCACGTGGTGCTTTCATAAGTTTGCTTACAATTTCAAACTATATATTATATCTAAATACTCACCCTGTCTACTCCACAATGGTCATTTACTCTTAAAAAATCTCTAACGATCTAACCTTCTAGGACTTGAACTATCGTTATTATATGCATGCACACATTTCAAACGATTCATTTTTTATTAGGGTGTACACGGGTTGGAGACATTTTTTGGACCAACTCGAATTTTTTGTTTGATCGGGTTGGCTACCCAAATAACCCGAATAGGGTACCCAACCCAATTCGGGTTAGGTTGGGTTGGGTTGTCCGATTGTGTGCTCTTTTTCTTTTATTTTCTTTTCTCCCTGTTTTTTGGTAAAACATAGTGGCTTGTCCATTGATCTAAATTATAAGTATAAAACATAAAATAGTTCTTAAACACTAATTGGCATATCCATGAATCCCTAGTCACAAACATACTCATCAATCAAACTTCTAAAACATGAAGAGGGGAAGCCAAAAATGTTAGAGAGGTAGGTTAAAATTTGAGAAGCAAGAACTGAAGATGAGAAAAAAAAATGTTAGAGAGGAAGCCAAAAAATTTAAACACACTGAAATTTTAAACAGACTGAAGTTTTAAGATCTGAAATTTTTAGTGTTTACAAACCTTGTTGCCAATCTGGTTTGTTCGGACGCCGAAGGTTGGAGCAGCGCGGATGCCGGAGGTTGCCATTGCTAGAGCGAACTCTGGAGAAGGGAGAAGTCAAGAGGCCAAAAGGGAGAAGGGAGCAGCTAATCTACCCGATGTCAATCTATGTTGGAGGCTGGAGCAAAGACAGAAAAGGGAGAAGTCGAAAGGCAGAGGAGAAATCGAGAAAAGTTGA

mRNA sequence

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATTGTTTACAAACCTTGTTGCCAATCTGGTTTGTTCGGACGCCGAAGGTTGGAGCAGCGCGGATGCCGGAGGTTGCCATTGCTAGAGCGAACTCTGGAGAAGGGAGAAGTCAAGAGGCCAAAAGGGAGAAGGGAGCAGCTAATCTACCCGATGTCAATCTATGTTGGAGGCTGGAGCAAAGACAGAAAAGGGAGAAGTCGAAAGGCAGAGGAGAAATCGAGAAAAGTTGA

Coding sequence (CDS)

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATTGTTTACAAACCTTGTTGCCAATCTGGTTTGTTCGGACGCCGAAGGTTGGAGCAGCGCGGATGCCGGAGGTTGCCATTGCTAGAGCGAACTCTGGAGAAGGGAGAAGTCAAGAGGCCAAAAGGGAGAAGGGAGCAGCTAATCTACCCGATGTCAATCTATGTTGGAGGCTGGAGCAAAGACAGAAAAGGGAGAAGTCGAAAGGCAGAGGAGAAATCGAGAAAAGTTGA

Protein sequence

MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHCLQTLLPIWFVRTPKVGAARMPEVAIARANSGEGRSQEAKREKGAANLPDVNLCWRLEQRQKREKSKGRGEIEKS

Homology

[Close]

BLAST of ClCG08G002180.1 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.0e-49
Identity = 113/201 (56.22%), Postives = 140/201 (69.65%), Query Frame = 1


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEEC 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDC 180

Query: 181 CVCCEDLKGKGMEVSRIPCGH 194
            VCCE++K KG EV RIPCGH
Sbjct: 181 SVCCEEIKRKGGEVRRIPCGH 198

[Close]

BLAST of ClCG08G002180.1 vs. TrEMBL
Match: A0A0A0L1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539600 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.4e-15
Identity = 58/115 (50.43%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 57  GEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQF---DGSFKI 116
           G  L  FSNL HPRQ Q +  LV +FL  FNLHSSV QI+C KILSFA QF     SFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 117 EAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEE 169
           EA I  M+DLI   +   E   P          G PE  IERL  QKF+   +EE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPP------PRTTGVPEFAIERLMTQKFDGFNKEE 147

[Close]

BLAST of ClCG08G002180.1 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-14
Identity = 70/189 (37.04%), Postives = 94/189 (49.74%), Query Frame = 1


Query: 21  QILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL--FPFSNLRHPR--QHQGME 80
           Q +E+R GH S+L+   S       QILQ     L+ + L  FP   L  P    H  + 
Sbjct: 29  QFVELRLGHFSQLVLSPSH------QILQQTSPILISDTLIRFPLRELEDPPFISHSSL- 88

Query: 81  ILVTEFLRSFNLHSSVCQIMCRKILSFARQF-----DGSFKIEAKIDYMEDLIWNMEVVP 140
                FL S+N+  +VC  +  KI SFA Q      + +F I A +D++     +++   
Sbjct: 89  ---CRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHIIAALDFVYTHWVDLDP-- 148

Query: 141 ELLYPISIISEEAGA---GAPESVIERLRKQKFEEEEEEEME-ECCVCCEDLKG---KGM 194
                    +E+A A   GAP S IERL K+K++    EEME EC VC EDL G   K  
Sbjct: 149 ---------AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGKTEKEK 196

[Close]

BLAST of ClCG08G002180.1 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.2e-10
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 1


Query: 1   MSFSIASSLEYS-FRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEA 60
           MSF+I++ ++Y  + S    + +L+V      ++IS S   G  P ++L   P      A
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGR-PHEVLHQTPRIPYHNA 60

Query: 61  LFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQF-----DGSFKIE 120
           LF  S     RQ Q     +T+ L S N+  +  Q M R+I S   Q      + +F I 
Sbjct: 61  LFYLSL----RQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHIL 120

Query: 121 AKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVI-----------------ERLR 180
           A++D++  LIW    +P +           GAGA E+V+                 ERLR
Sbjct: 121 AEVDFIR-LIW----LPSM--------GGGGAGAEETVVLDEAPPAVKRGVGVARGERLR 180

Query: 181 KQKFEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGH 194
                EE+ EE+ +C +C ++L  +  EV RIPCGH
Sbjct: 181 S----EEKMEELGDCSICLDELSCEKREVMRIPCGH 194

[Close]

BLAST of ClCG08G002180.1 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.2e-10
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 1


Query: 1   MSFSIASSLEYS-FRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEA 60
           MSF+I++ ++Y  + S    + +L+V      ++IS S   G  P ++L   P      A
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGR-PHEVLHQTPRIPYHNA 60

Query: 61  LFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQF-----DGSFKIE 120
           LF  S     RQ Q     +T+ L S N+  +  Q M R+I S   Q      + +F I 
Sbjct: 61  LFYLSL----RQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHIL 120

Query: 121 AKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVI-----------------ERLR 180
           A++D++  LIW    +P +           GAGA E+V+                 ERLR
Sbjct: 121 AEVDFIR-LIW----LPSM--------GGGGAGAEETVVLDEAPPAVKRGVGVARGERLR 180

Query: 181 KQKFEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGH 194
                EE+ EE+ +C +C ++L  +  EV RIPCGH
Sbjct: 181 S----EEKMEELGDCSICLDELSCEKREVMRIPCGH 194

[Close]

BLAST of ClCG08G002180.1 vs. NCBI nr
Match: gi|659114890|ref|XP_008457277.1| (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 119/201 (59.20%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEEC 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   F EEEEEE+ +C
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDC 180

Query: 181 CVCCEDLKGKGMEVSRIPCGH 194
           CVCCE++K KG EV RIPCGH
Sbjct: 181 CVCCEEMKRKGEEVRRIPCGH 198

[Close]

BLAST of ClCG08G002180.1 vs. NCBI nr
Match: gi|449442467|ref|XP_004139003.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 8.7e-49
Identity = 113/201 (56.22%), Postives = 140/201 (69.65%), Query Frame = 1


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEEC 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDC 180

Query: 181 CVCCEDLKGKGMEVSRIPCGH 194
            VCCE++K KG EV RIPCGH
Sbjct: 181 SVCCEEIKRKGGEVRRIPCGH 198

[Close]

BLAST of ClCG08G002180.1 vs. NCBI nr
Match: gi|659121671|ref|XP_008460768.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 114/212 (53.77%), Postives = 135/212 (63.68%), Query Frame = 1


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MS S +SS + SF +TPN+D  L  RFG+ SRLI        I DQILQ  PS LMGE L
Sbjct: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLI--------IVDQILQQTPSILMGETL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCRKILSFARQF---DGSFKIEA 120
            PFSNL HP Q Q +E LV EFL SFNLHS  S  + +CRKILSFA QF    GSFKIEA
Sbjct: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120

Query: 121 KIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEE-EEEEEMEECCV 180
            ++++EDLI   +   E   P          GAPES IERLRK+KF+   +EEE+ +C V
Sbjct: 121 NVEHVEDLIIGEQGFQETPSP------PRTTGAPESAIERLRKEKFDVLNKEEEIGDCSV 180

Query: 181 CCEDLKGKGMEVSRIPCGH-----CLQTLLPI 202
           C E+LKG+G EVSRIPCGH     C+ T L I
Sbjct: 181 CYEELKGQGKEVSRIPCGHVYHKSCILTWLQI 198

[Close]

BLAST of ClCG08G002180.1 vs. NCBI nr
Match: gi|659083325|ref|XP_008442291.1| (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 4.3e-32
Identity = 88/158 (55.70%), Postives = 105/158 (66.46%), Query Frame = 1


Query: 56  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFK 115
           MG+ L PFSNLRHPRQ Q ++ LV +FL SFNLHSSV + +C +ILSFA QF     SFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERL-RKQKFE---EEEEEE 175
           IEA ID++EDLI   +   E   P +        GAPES IERL  KQKF+   +EEEEE
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRT-------RGAPESAIERLIMKQKFDGFNKEEEEE 120

Query: 176 MEECCVCCEDLKGKGMEVSRIPCGH-----CLQTLLPI 202
           + +C VC E+LKGKG EVSRIPCGH     C+ T L I
Sbjct: 121 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQI 151

[Close]

BLAST of ClCG08G002180.1 vs. NCBI nr
Match: gi|700199686|gb|KGN54844.1| (hypothetical protein Csa_4G539600 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 6.3e-15
Identity = 58/115 (50.43%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 57  GEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQF---DGSFKI 116
           G  L  FSNL HPRQ Q +  LV +FL  FNLHSSV QI+C KILSFA QF     SFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 117 EAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEE 169
           EA I  M+DLI   +   E   P          G PE  IERL  QKF+   +EE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPP------PRTTGVPEFAIERLMTQKFDGFNKEE 147

The following BLAST results are available for this feature:

BLAST of ClCG08G002180.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHS2_CUCSA	6.0e-49	56.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1	[more]
A0A0A0L1B0_CUCSA	4.4e-15	50.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539600 PE=4 SV=1	[more]
A0A0A0LRB0_CUCSA	8.2e-14	37.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1	[more]
A0A0A0K2W2_CUCSA	4.2e-10	30.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1	[more]
A0A0A0K696_CUCSA	4.2e-10	30.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1	[more]

BLAST of ClCG08G002180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114890\|ref\|XP_008457277.1\|	1.2e-50	59.20	PREDICTED: RING finger protein 165-like [Cucumis melo]	[more]
gi\|449442467\|ref\|XP_004139003.1\|	8.7e-49	56.22	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]	[more]
gi\|659121671\|ref\|XP_008460768.1\|	2.9e-44	53.77	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|659083325\|ref\|XP_008442291.1\|	4.3e-32	55.70	PREDICTED: RING finger protein 165-like [Cucumis melo]	[more]
gi\|700199686\|gb\|KGN54844.1\|	6.3e-15	50.43	hypothetical protein Csa_4G539600 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG08G002180	ClCG08G002180	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG08G002180.1	ClCG08G002180.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG08G002180.1.cds2	ClCG08G002180.1.cds2	CDS
ClCG08G002180.1.cds1	ClCG08G002180.1.cds1	CDS