ClCG08G000160.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAATTCCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATCATACAATACAACTTTATCCCTTGATAGCGTCTGTCTGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGGTTTTGCTGAGAACAAAGGGGTTGTGTCTCCACCGCACGATTTGAATGCCAAGTGGGACGCTTGTCTTGATTTGACGCTCCGTCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGTAATATTAATTCCTCCTCACTCTTTTTCTCTTTGCTTATTTCCATCTTATTATATTTTCCTACTCTTCATATGCCGGATTTCAAACATTGGAGTTATTTCTTTTCAACCATTTCTTTCTCTCGCTATTCTTTCCTAAAATTTGGAATTGCATGTCATTCCATTGCATCAACCAATTGTTCAGATTTTTTCATCTCTCGACAGGATAGGGTTCGTTGCATCCTCGAATATCTGGATTTTCTTGATTTGTGTTAAGCAAACTTGTGAATTTGAACCCAGTTACCCACTTGTTGACATCCAGGATTTTTCTAAAATAAATGCCCTCTTTGGTTGTTTATTTTGAAGCACTTGAACTCAATAATGTACCAATTTTTAATCATTTTTCTGAAACATCAGCTGTTAGTTGTATGGTTTCAATAAACTTAATATACTAATAAGCTCTGTATCTTGATTAACAACTAGGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCATACACGGATTGTAATTCATTATTTGAAGGTTCCACCACAAAATTCGCATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAACTCACATTTTCTTTTACAGTGGAATCGTCTCCTTGACTTGTTCTGTTTAATATGATATTATTTGATGACCTTTAGATTCTGACCTAATTTTTCTGGAGAGATTGACTCTTATGTATTTATATTCATTTTTTTTTTTTTTTTGTTGATATAGACCATGTTATGGTCATGAATTAATTTATTGTGTTGCAAGGGCTGGAAGTATTAAGCTTGTACTATTGTAAATTATCAGAATCAATCACTAGATCATACTTATTAGGAGCTGTATGATCTAGAAATTACTTATTAAGATTTGGTAATCCTGGAACAAGAGCATTCGGGAGTTTTTCAACAAAATCTTTATTCTACGTCATTACCTAGTAACTAAGATCATGAATTTGCAACCCATACATTCGTTTTATTCAACTAAAAGTTGGAGGTTCAAAATTTCCAAAAATGCCAACTTTTTAGTCAACCTTTTTTGTTCGATAGAGTGTTTGTGTCATATATGTGTTAGACACACACACTTCAAACAAGTGTTTGACAATCAAAAAGAAAAAAAGAAGATATCCTTTTTTGTTAATTTTTATTTCTAATTTCAGACACAAAGGACATGTTCCGATAAGTAGGGGACACTCACAAACACATCAACCTAATAACATTGACTGGTGGCACACCATTTTTCTGTATGTCTTGGAGCCGTTTTGGCAGGGCATAATATACCTTGAAAAAGGGAGAAACATTTAAGCCTATTCCTTACTACATGCCCAGGAAGCATGTTCAATTTGTTTTTGACAAGGTTTCTATGTCGGACACTTCACATCTTTTCTTTCTTTTTTTTTTTCCCCTTTTTTTTAATTAAAAAAATTGGACATGTGGTAGACACACCATAGTAACATCTAAATGGTATATCAAAAAGATCCAAACCCTTTAAGCGGTCAACAATGGTGTTGGTCAAAACGGCAACGAAGTTGATTGGAGGTAGGAGTATTAGGTTTAAGTGGGCTCATATGACTCATTGGGTTTTACGTACTATTTAAATCTAAACTAAATCCAACGGCCACTTAAATCTTCATTCATGTTTTTTTATTTTTATTTATTATTATTATTATTGTTATTGTTGTTATTTGTAATACCTAGTAAAAAACTAAAGTACTTTGGTTTGATCTTTTAATATTATTTTAAAAATTTAAAGATAATAACATGTCCCTAATGTGTGTGTCCTACATTTTCTGAAATTTGAGTCATCGTGTTCATGACAAGGTTGTGTCTGTGTTCGTGCTTTTTAGCTACATGCCCATTGCCCAACCCATTACGTATGATCAATCATAAAATATAACCCAACACTAAATGCCCATTTGAAAGTCGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGGGTCCATGATACTAATTTTTATAATCACATTTAAACTTCTCATGTTAAATTTGTTTACTTATCTATTTTGAAGTATCAAATATGTCAGTATGGCTAGAGATGGTGCGTTGCTCTTGCTGGTAATTTTAAAGTGGTTCGATCCCTAGTTGAGAAAGGTTCTGGTGGGAGGGTGACTAAGTCGATGTCTCTTTAATGACTTTATTGAGGGTGGCAACTTTTTGGCCCTCCTCTTTTGAATGTTAAGTTTACTTGGGCCAATAGTAGGGCTTGTAGTAGAAGTGACAGATTTTTGCTTTCTAAGGATTGGGTTGACTATTTTGGTGAGTTTAGATAGGTGGTGGGGTTGAGAGTGGGGTTAGATCATTGGTCGATCATTCTCAGCTTGAGTCCTCAGAAATGGGCTCGTGACCATTCAGGTCTGAGAATATGTGGTCAAAGCATCCTTCCTTTGAGTTCTTATGTCCTCAAAATGCCCTCCTCTGGGAGGTGGGAAGGGTATTGATTTATGAGAACCTTTTAAGCGCCCTTAAATGTTTGCTTAAATCTTTGAACAAAGTGGTCTTTGGGGACATTAGGATTAAGAAACAAGAGATCTGGGCTAAGATTAACTTGATTAATCTGGCAGAGATGGAGGGTCTGTTGGATGATCCTTTGTAAGAAGAGCGAATTCCATAAAGGTGGAGTTTGCTGATCTAGTTAGTAGTTAGGAAAGAAAATCTAAGTTGGAGGCAAAAGATGAAGGTCATTTGGACTAAAGGAGATTGTAATGCATCTTTTTTTTTTTTTTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTGTAGGGTGGCTAGCGATAGGAAAAGCAAGAATTACATTGGGTTGGAAAATGAAAGAGGAAAGGTCATTTGGAAGGATTGACAAAGAAGTTCCTTCCAACCGTTATAGTCCGGATGTAATTAACAAACTCTTTATTAGTGGCAGTGATTGGTGTTCAATTTCTAAGAAAGGGAAGACTTGGTTGCTCCCTTTTCTCTTGAGGAGATTAGATGGATGGTCTTTCGGTGCAATAGGAACAAATCTCCAGGTCTAGATGGATTCACCATGGCTTTTTATCAGGATAATTGGGATTGTCTAAAGGGGATGTCGAGGGACTTTTCAAGAAATTCCTTGAAAGGGGTATCTTGACCCTCTATCCCCTTTTCTCCTCTTGCTAGTTGTTGATGTTCGAAGTAGGATCATCTCTAAGGGTGTTCAAGGTCAAATTCTTGAACCTTTTGAGGTTGGCAGGAAGAAAGTTGCCTCATCCCATCACCAGCTTGTTGATAACACGATCTTCCTATGATTTTGCAAGGTGGATTCTTTTTTGTTGTTGAATCACATTTGGGCCTTTTTTGAGCCTTTTTCAAGGCTAAGGATTAACAGGGGAAAATGTCAAAAAATGAAGATTACTTGTGAAACCAAGAAGTTGAGTTAGTGCTCTAAATTGTGGGTTATGTTGTAGGGTTCTTCCCTTCTACATAGTTAGGTCTCCCTTTGTGTGGCAACCCAAAGGTTGTTTCTTTTTAGAACCAGTGGTTGATAAGGTTAGAAAAAGTTTGGCATCATGGAAGAAATGATTAATGCTTATTCATTATGTGTTGAGTGGTCCCCCATTTACTATTTCTCTTTGTTCAGACCCACTTGTTTGGTTTATAAGGATTTAGAGAAGCTCATGCATTAATTCCTTTAGAAAGGGTGGAAGAAAGCAAGGGGCGCATTTGGTGAGATGGGAGGCTGTTAAAAAGTTTGTGAGTTTGGGAGCTTAGCAATTGGGAATTTAAGGACTTGCAATAAAGCCTTGTTGGCGTAATGGTTGTAGCGTTTTCTCCTAGAGCCTAAGACCTTTGGCAAAGGATCATTATTATCAACTCTGGCCTTCACCCTTCTAAGTGGCTATCAGATAGTGTGAGAGGGACTTTCCAAGATAAATATCTTTCCACAGATTTTGGAAAGTCCCTCTCACACTTTCTCTCACCTAGTCCATTGTGTGGTGGGGGATAGATCCCTCTGCTCTATGTTTCATCTCGATGATCTATCACCCTTTAAAAATTGTTTGGTGGCTGATTTTTTAGTCTAGTCTGAGAGCTTTTTCCCCTCGTTTCTGTTGTGCATGACTGATGGAGAAGTAATGGATGTTTGAGCTCTCCTATATTTGATAGGGGAGGTTGACTTTAGGTTGGGAAGAAATGATTTTCACGTTTGGAGTCACGACCCTTTGGGCGTTTTTCTTGTAATTCCTTCTTTCATTGTTTGTTGGATCCTTCCCCTGTTAACGCAACTTTTTTCCTGCTCTATGGGAGGATAAAAATCCAAGAGAAGGTTAAGTTCTTTACTGGTCGGTGTAAGACAGTCAAGCTAATACTTTGAATTGGCTTATAAGGAAGTCTTCCTTGTTAGTTGGCCCATTTGCTGTATTCAGAGGAAGACCTGGATTATATTTTTTTGGAGGTGGGTGTTAGTATGTGAGATCAGTTTGGAGTAGCTTTGTCATTTGGTTTTTGGATTGCCTGTCATAAGGTTTCTAATGATATAATTGGGGAGTTCGTCCTCAATCTACCTTTTTGTGATAAGGACTGGTTCTTGTAGCTTGTCCAGGTGTTTTCAATTTTGTGGGATCTTTGGAGCAGGAGAAATGGTAGAATTTTTAGAGGTTAGGAGAGGGGCCCTTTGGAGGTTTGGTTCCTCTTTAGATTTCATGTTTCTCTTTGAGCTTTGATTTCGAAGAGATTTTGTAATTATTCTGAGTTCTATTTTGCACAATTGGAGTCCTTACCTCGAATTGAGTTTCCTTTTGAGGGATCGTCATTTTTTATGCCCTTGGTTTCTTTCAATTTTTTCTCAATGAAAGTTATTTCATAAAAATAAAAACACAATCTTTTTCTTTTTAAAATAATGTATCCCCAATGTGTTCATGCCCAACATTTCCAGAAATTGACTTGCGGTATGTTTGTGTCGTGTTGTTTCTGATATCTGTGTTTCTTTGGTCTTAGGTCTCTTGGTGTGGTATTATATTGTTAAGTTGTCCAAAACATACATCCCATGTTTATTTCTATCCTTGTTTATGCAGCCTTTGTGAAAAAGCATGGTAAAACCGTAAAACTGATAACACCTGTTTTATTTGTAGTTCATTCAGAAGTTTTTGTACTAATTATTCAGTGGATTTGATCTTTATTGGTGCCTTCATATCAGAATAACGACTGTTTTTTAGCAGTTCTGAATTCTCTCACTATATGGTGATAGGTGTCCAAACAGTCCTTGTTAAGAGTGATAGTAGGGTAATATTGAGAATATTATTTGGAGTTTGTTAGAGTTGAGGGTTATAAATTGGAGTTCAGGCTTCGGAAGGGAACTGGAGTTCTGGGAGTAGTTTTGTGTGAGAGAAATAGCCCTCTCAAAAGGTTATTGGTTATTATAACTGATCTGTTTTTCTTTTTAATATGTTATAATTATAATTAGTATTATTTCTTATTTTTGACAAGAGGATAAAAATGGGGTGGAGACGTGGGATCTATGAAGCATGGGTATGCAAAATATAGCTACCTGAAATTGAGCTTTTTGATTTATTTATTTCTTTTTATTTTTTTAAATTTTTTCTCAGTTTTGGACATCGGGATAATTTCTAGACATGAATGAATTTATTGAAGAAAGGAAAAGAACTAAACCGAGCCCACTTAATCAGAATCATAATGATAACGACCAAATATGAAAGAAAAGTTAAAACATCAAGTTGATCACCACATTTTCTAATCTTTGCTTCACAGGAATAACTAGTCTTTTACTGATACCTTTTTTTTGTTTATTTTAACTCGTATTTTGGGTTCTTGCCATGTTTTTTCATATCTTTGTAAGGAAAGGATAAAACATTTGCCGTTTTCTGAAGTTTCTAAAGCAGATAGTGGTTTGTCTACATTTTATTTATTAAATTGATAAATTGATATCTGGTTGATATTTGGTTTTGTCCAGGAGGGGCAAGATTAGTCACAAATGCTGTGAGAAGCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAAGCGTACGTTTCCCATGTTTGGTTCCCATTGTGTAATTCAAACGTTTTTGGTTGTAGACATTATACTTCATTACCATGCATGCTGCAGATTTTTGTGGGCATCTGTAACTTTTTCCTGTTGCTAATACTAATAGAGTTACGTGAGCTGGAGAGGGAAAAAAAGAAATCAATAAGTACTCTTCTTGCAACCCTCACTTTGTTTATTTACTTCATGCTTTGACAACCATCTTCTGTATCATACTCTTTACAGTTTGATGGCTTCAAGTAGTGGGAAAACGTGATACATTATTTTGGACA AAAGAATTCCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATCATACAATACAACTTTATCCCTTGATAGCGTCTGTCTGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGGTTTTGCTGAGAACAAAGGGGTTGTGTCTCCACCGCACGATTTGAATGCCAAGTGGGACGCTTGTCTTGATTTGACGCTCCGTCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCATACACGGATTGTAATTCATTATTTGAAGGTTCCACCACAAAATTCGCATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGGTGGGGTTGAGAGTGGGGTTAGATCATTGGTCGATCATTCTCAGCTTGAGTCCTCAGAAATGGGCTCGTGACCATTCAGGTCTGAGAATATGTGGTCAAAGCATCCTTCCTTTGAGTTCTTATGTCCTCAAAATGCCCTCCTCTGGGAGGATTAAGAAACAAGAGATCTGGGCTAAGATTAACTTGATTAATCTGGCAGAGATGGAGGGTCTGTTGGATGATCCTTTGAGGGGCAAGATTAGTCACAAATGCTGTGAGAAGCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAAGCGTACGTTTCCCATGTTTGGTTCCCATTGTGTAATTCAAACGTTTTTGGTTGTAGACATTATACTTCATTACCATGCATGCTGCAGATTTTTGTGGGCATCTGTAACTTTTTCCTGTTGCTAATACTAATAGAGTTACGTGAGCTGGAGAGGGAAAAAAAGAAATCAATAAGTACTCTTCTTGCAACCCTCACTTTGTTTATTTACTTCATGCTTTGACAACCATCTTCTGTATCATACTCTTTACAGTTTGATGGCTTCAAGTAGTGGGAAAACGTGATACATTATTTTGGACA ATGGCTGAGAACAAAGGTTTTGCTGAGAACAAAGGGGTTGTGTCTCCACCGCACGATTTGAATGCCAAGTGGGACGCTTGTCTTGATTTGACGCTCCGTCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCATACACGGATTGTAATTCATTATTTGAAGGTTCCACCACAAAATTCGCATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGGTGGGGTTGAGAGTGGGGTTAGATCATTGGTCGATCATTCTCAGCTTGAGTCCTCAGAAATGGGCTCGTGACCATTCAGGTCTGAGAATATGTGGTCAAAGCATCCTTCCTTTGAGTTCTTATGTCCTCAAAATGCCCTCCTCTGGGAGGATTAAGAAACAAGAGATCTGGGCTAAGATTAACTTGATTAATCTGGCAGAGATGGAGGGTCTGTTGGATGATCCTTTGAGGGGCAAGATTAGTCACAAATGCTGTGAGAAGCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAA MAENKGFAENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQVVGLRVGLDHWSIILSLSPQKWARDHSGLRICGQSILPLSSYVLKMPSSGRIKKQEIWAKINLINLAEMEGLLDDPLRGKISHKCCEKQAVLRLNGCETVILLEIV
BLAST of ClCG08G000160.1 vs. TrEMBL
Match: A0A0A0KUY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652290 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 6.8e-53 Identity = 107/119 (89.92%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TrEMBL
Match: A0A067GWJ1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041737mg PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.6e-31 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TrEMBL
Match: V4TE08_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002721mg PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.6e-31 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TrEMBL
Match: A0A061FS50_THECC (Domain of Uncharacterized protein function OS=Theobroma cacao GN=TCM_036507 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.6e-31 Identity = 63/93 (67.74%), Postives = 80/93 (86.02%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TrEMBL
Match: M5XGA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013917mg PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30 Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TAIR10
Match: AT1G22520.2 (AT1G22520.2 Domain of unknown function (DUF543)) HSP 1 Score: 128.6 bits (322), Expect = 4.3e-30 Identity = 64/89 (71.91%), Postives = 69/89 (77.53%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. TAIR10
Match: AT1G72170.1 (AT1G72170.1 Domain of unknown function (DUF543)) HSP 1 Score: 127.9 bits (320), Expect = 7.3e-30 Identity = 64/94 (68.09%), Postives = 71/94 (75.53%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. NCBI nr
Match: gi|700197547|gb|KGN52724.1| (hypothetical protein Csa_5G652290 [Cucumis sativus]) HSP 1 Score: 215.3 bits (547), Expect = 9.8e-53 Identity = 107/119 (89.92%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. NCBI nr
Match: gi|659119496|ref|XP_008459688.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X2 [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 9.2e-43 Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. NCBI nr
Match: gi|778708139|ref|XP_011656128.1| (PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42 Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. NCBI nr
Match: gi|659119494|ref|XP_008459687.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X1 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1
BLAST of ClCG08G000160.1 vs. NCBI nr
Match: gi|449447629|ref|XP_004141570.1| (PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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