ClCG06G017260.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G017260.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Genomic DNA, chromosome 3, BAC clone:F14O13
Location	CG_Chr06 : 30458295 .. 30459515 (-)
Sequence length	1012

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAACCCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAGAGTTCACATCAAACACATCTCTCTCCCTTATTTCCTTTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAGGTTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTAATATTTGTGAAGATGATGTTAGAGGCTTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGATTGAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAAATGGAGGGAAATCCAAATCCAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCAATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGGCTATTATTAACTTGTCTTATCTTCTAGTCATAACAAATATCTAATTTGTTCCCTTTGTTTCTGAATTTTCTGGTGATTGTCTTTCAATTCACTAGTTTAAGCTCGAGATTAGAGATTAGAGATTAGTGAAGGCTAGCAAAGAAAACTAAGACTACATTAGATCTTCCATCACTAACAGGAACTCTAATCATTTGCTTTGATAGGAGATGGATTATATTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAAATAGATCCTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAAGTAGGCATGAAAACAGAATTTTCGATACCACACTAGAATTAAGAACAAATAATGAAATGCCAATTGAACTGTTACTAGTTGTAAATATGTCCAAGAAGGTTGTTACTTTTGCACCCTCACCCTTCATTTAAACCCAA

mRNA sequence

CATTAACCCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAGAGTTCACATCAAACACATCTCTCTCCCTTATTTCCTTTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAGGTTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTAATATTTGTGAAGATGATGTTAGAGGCTTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGATTGAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAAATGGAGGGAAATCCAAATCCAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCAATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATATTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAAATAGATCCTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAAGTAGGCATGAAAACAGAATTTTCGATACCACACTAGAATTAAGAACAAATAATGAAATGCCAATTGAACTGTTACTAGTTGTAAATATGTCCAAGAAGGTTGTTACTTTTGCACCCTCACCCTTCATTTAAACCCAA

Coding sequence (CDS)

ATGGGTGTATGCTCAAGCAAAGATGGGAGTAATATTTGTGAAGATGATGTTAGAGGCTTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGATTGAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAAATGGAGGGAAATCCAAATCCAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCAATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATATTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAAATAGATCCTTTCCATAAATGCGTCTGTAAGTAA

Protein sequence

MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTSKKEQQIDPFHKCVCK

Homology

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BLAST of ClCG06G017260.1 vs. Swiss-Prot
Match: YPF05_PLAF7 (Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0207 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 7.1e-09
Identity = 52/200 (26.00%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 14  EDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKML 73
           +++++ +KE+I+ ++EE++  + E  KE K   K+ +    KE   K E K +KEE+K +
Sbjct: 501 KEEIKEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEV--KEEIKEVKEEIKEV 560

Query: 74  RKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQE-RARRDEAIEKWKQLYHAIK 133
           ++++KE   EI+E     K   + E++     + E+I++E +    E  E+ K++   IK
Sbjct: 561 KEEIKEVKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEVKEEIKEVKEEIKEVKEEIK 620

Query: 134 IELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRN-REI 193
            E+ + I+             E  E +K   +  +E IK +KE++    +E+ K   +EI
Sbjct: 621 EEVKEEIK-------------EVKEEIKEVKEEIKEEIKEVKEEIKEEVKEEIKEEIKEI 680

Query: 194 -DILRQSLRIMTSKKEQQID 211
            + L+  +   T+K+E+  +
Sbjct: 681 KEELKNDISSETTKEEKNTE 685

HSP 2 Score: 59.7 bits (143), Expect = 4.6e-08
Identity = 51/186 (27.42%), Postives = 97/186 (52.15%), Query Frame = 1


Query: 14  EDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKML 73
           +++++ +KE+I+ ++EE++ V  E+ +E K  ++++     +E   K  K+ +KEEVK  
Sbjct: 545 KEEIKEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEIKEEI--KEVKEEIKEEVKEE 604

Query: 74  RKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEAIEKWKQLYHAIKI 133
            K+VKE I E++E    E      E++     + E+I++E     E I+  +++   IK 
Sbjct: 605 IKEVKEEIKEVKEEIKEEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIK--EEVKEEIKE 664

Query: 134 ELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKA--LKEQVVSMEQE-KYKRNRE 193
           E+ ++ +   N       ++E T+  K     KEET K   + ++V+  +QE K K  R 
Sbjct: 665 EIKEIKEELKNDI-----SSETTKEEKNTEHKKEETEKKKFIPKRVIMYQQELKEKEERN 721

Query: 194 IDILRQ 197
           + +L Q
Sbjct: 725 LKLLEQ 721

HSP 3 Score: 47.0 bits (110), Expect = 3.1e-04
Identity = 40/160 (25.00%), Postives = 80/160 (50.00%), Query Frame = 1


Query: 39  DKETKAHEKDMV--VFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGE----K 98
           D   K HEK+ +  +   KE   +  K+ +KEE+K +++++KE   EI+E    E    K
Sbjct: 471 DTAMKMHEKEQIDDIQERKEEIKEEFKEEVKEEIKEIKEEIKEVKEEIKEEIKEEIKEVK 530

Query: 99  TATEWEMEGNPNPIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQ--RTHNGDGLYW 158
              + E++     + E+I++ +    E  E+ K++   IK E+ ++ +  +    + +  
Sbjct: 531 EEIKEEIKEEIKEVKEEIKEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEIKEEIKE 590

Query: 159 GATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNRE 191
              E  E +K E++  +E IK +KE++    +E+ K  +E
Sbjct: 591 VKEEIKEEVKEEIKEVKEEIKEVKEEIKEEVKEEIKEVKE 630

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BLAST of ClCG06G017260.1 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 3.8e-110
Identity = 202/218 (92.66%), Postives = 208/218 (95.41%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS I  DDV+GLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEG PN IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQIDPFHKCVCK 219
           EQ+KYKRNREIDILRQSLRIMTSKKEQQI+ FHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of ClCG06G017260.1 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 124/213 (58.22%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 1   MGVCSSKDGSN--ICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ G    + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
           LK Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 212

[Close]

BLAST of ClCG06G017260.1 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 124/213 (58.22%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 1   MGVCSSKDGSN--ICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ G    + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
           LK Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 212

[Close]

BLAST of ClCG06G017260.1 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 120/211 (56.87%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+R+L+EE++ +M E +KE++ +E+D++VF FKEA WK
Sbjct: 1   MGGSGSKSERRCSEKYVMNLKEKVRVLQEEIKEMMYEREKESRGYERDIMVFTFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARR 120
            E KRL+EEVK LRK V+   E I E+E G   +K+  EWE+ G    + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRKVVEEKDEKIREMEVGLMEKKSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E L+ ELQ KEET KALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENDIQMENLRRELQEKEETTKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
            Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 210

[Close]

BLAST of ClCG06G017260.1 vs. TrEMBL
Match: I1LAN6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 122/211 (57.82%), Postives = 152/211 (72.04%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+RLL+EE++ +M E +KET+ +E+D++VF FKEA  K
Sbjct: 1   MGGSVSKSRRMSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRRYERDIMVFTFKEADSK 60

Query: 61  TEKKRLKEEVKMLRKKVKES---ITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARR 120
            E KRL+EEVK LR  V+E    I EIE G   + +  EWE+ G    + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKNSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E LK ELQ KEETIKALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENGIQMENLKKELQEKEETIKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
            Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 210

[Close]

BLAST of ClCG06G017260.1 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 90/226 (39.82%), Postives = 129/226 (57.08%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG-- 60
           MG C+SK        + RG++      +++ RG    + KE    EK M +   KEA   
Sbjct: 1   MGGCTSKQ-------ERRGVRSVKETSKDQSRG-RRHLIKERDEREKVMFL-QLKEAERE 60

Query: 61  WKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRD 120
           W+ E+K+L+EEV+ LRKK++E   E +     E+   +W        + E++  ERA RD
Sbjct: 61  WRKERKKLREEVRRLRKKLEER-EEAKTTTTEEREYWKW--------VVEEMCVERAVRD 120

Query: 121 EAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTEA-----LKTELQAK 180
           EA+EKWKQLY AIK ELD LI  T +  G       L     E TEA     L+ E++ K
Sbjct: 121 EAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRVK 180

Query: 181 EETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTSKKEQQIDPF 213
           EET++ L+EQ+V M+++KY++ REID+LRQSLRI+ SKK+++   F
Sbjct: 181 EETVETLEEQIVLMDRQKYEKEREIDLLRQSLRILGSKKKKKTGSF 208

[Close]

BLAST of ClCG06G017260.1 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27
Identity = 79/199 (39.70%), Postives = 115/199 (57.79%), Query Frame = 1


Query: 9   GSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKRL 68
           G +  +D+    K +I++   E R      +   +  EK+ V+ A K  E  W+ E+KRL
Sbjct: 2   GGSTSKDERNSSKRRIKVKANEQR----RRETRRELDEKERVILALKMAETEWRKERKRL 61

Query: 69  KEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEAIEKWKQ 128
           +EEVK LR+K++E     EEG   +    EWE       + EQ+  ERA R+EA+E+WKQ
Sbjct: 62  REEVKRLRQKMEEK----EEGKAKQH---EWEW------VVEQMCLERAVREEAVERWKQ 121

Query: 129 LYHAIKIELDDLIQRTHNGDGLYWGATER----TEALKTELQAKEETIKALKEQVVSMEQ 188
           LY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK ++  ME+
Sbjct: 122 LYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLKGRINLMEK 181

Query: 189 EKYKRNREIDILRQSLRIM 202
           ++  + REID+LRQSLRI+
Sbjct: 182 QQNGKEREIDLLRQSLRIL 182

[Close]

BLAST of ClCG06G017260.1 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 5.5e-110
Identity = 202/218 (92.66%), Postives = 208/218 (95.41%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS I  DDV+GLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEG PN IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQIDPFHKCVCK 219
           EQ+KYKRNREIDILRQSLRIMTSKKEQQI+ FHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of ClCG06G017260.1 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 3.0e-108
Identity = 198/218 (90.83%), Postives = 208/218 (95.41%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS I  DDV+GLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEG PN IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQIDPFHKCVCK 219
           EQ+KYKRNREIDILRQSLRIMTSKKEQQI+  HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]

BLAST of ClCG06G017260.1 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max])

HSP 1 Score: 226.1 bits (575), Expect = 5.9e-56
Identity = 124/213 (58.22%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 1   MGVCSSKDGSN--ICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ G    + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
           LK Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 212

[Close]

BLAST of ClCG06G017260.1 vs. NCBI nr
Match: gi|1012362388|gb|KYP73571.1| (hypothetical protein KK1_006214 [Cajanus cajan])

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-55
Identity = 120/211 (56.87%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+R+L+EE++ +M E +KE++ +E+D++VF FKEA WK
Sbjct: 1   MGGSGSKSERRCSEKYVMNLKEKVRVLQEEIKEMMYEREKESRGYERDIMVFTFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARR 120
            E KRL+EEVK LRK V+   E I E+E G   +K+  EWE+ G    + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRKVVEEKDEKIREMEVGLMEKKSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E L+ ELQ KEET KALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENDIQMENLRRELQEKEETTKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
            Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 210

[Close]

BLAST of ClCG06G017260.1 vs. NCBI nr
Match: gi|947084820|gb|KRH33541.1| (hypothetical protein GLYMA_10G130200 [Glycine max])

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-54
Identity = 122/211 (57.82%), Postives = 152/211 (72.04%), Query Frame = 1


Query: 1   MGVCSSKDGSNICEDDVRGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+RLL+EE++ +M E +KET+ +E+D++VF FKEA  K
Sbjct: 1   MGGSVSKSRRMSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRRYERDIMVFTFKEADSK 60

Query: 61  TEKKRLKEEVKMLRKKVKES---ITEIEEGNFGEKTATEWEMEGNPNPIFEQIQQERARR 120
            E KRL+EEVK LR  V+E    I EIE G   + +  EWE+ G    + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKNSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E LK ELQ KEETIKALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENGIQMENLKKELQEKEETIKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIMTSKK 206
            Q++SME+EKYK+ RE D+LRQSLRIM  KK
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIMNGKK 210

The following BLAST results are available for this feature:

BLAST of ClCG06G017260.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YPF05_PLAF7	7.1e-09	26.00	Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) GN=PF11...	[more]

BLAST of ClCG06G017260.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS07_CUCSA	3.8e-110	92.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1	[more]
A0A0B2P7Y4_GLYSO	4.1e-56	58.22	Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1	[more]
I1NEK7_SOYBN	4.1e-56	58.22	Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1	[more]
A0A151U2S2_CAJCA	1.2e-55	56.87	Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1	[more]
I1LAN6_SOYBN	2.3e-54	57.82	Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1	[more]

BLAST of ClCG06G017260.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23930.1	2.0e-30	39.82	unknown protein	[more]
AT4G13540.1	2.8e-27	39.70	unknown protein	[more]

BLAST of ClCG06G017260.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440646\|ref\|XP_004138095.1\|	5.5e-110	92.66	PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]	[more]
gi\|659129099\|ref\|XP_008464528.1\|	3.0e-108	90.83	PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]	[more]
gi\|356575194\|ref\|XP_003555727.1\|	5.9e-56	58.22	PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]	[more]
gi\|1012362388\|gb\|KYP73571.1\|	1.7e-55	56.87	hypothetical protein KK1_006214 [Cajanus cajan]	[more]
gi\|947084820\|gb\|KRH33541.1\|	3.3e-54	57.82	hypothetical protein GLYMA_10G130200 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG06G017260	ClCG06G017260	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG06G017260.1	ClCG06G017260.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G017260.1.three_prime_UTR1	ClCG06G017260.1.three_prime_UTR1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G017260.1.cds2	ClCG06G017260.1.cds2	CDS
ClCG06G017260.1.cds1	ClCG06G017260.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G017260.1.five_prime_UTR1	ClCG06G017260.1.five_prime_UTR1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 156..183 score: -coord: 121..141 score: -coord: 56..83 score: -coord: 10..37 scor
None	No IPR available	PANTHER	PTHR37226	FAMILY NOT NAMED	coord: 2..206 score: 2.9