ClCG06G009400.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G009400.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Peptidyl-prolyl cis-trans isomerase
Location	CG_Chr06 : 15744750 .. 15745274 (+)
Sequence length	525

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCAAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGAAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGA

mRNA sequence

ATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCAAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGAAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGA

Coding sequence (CDS)

ATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCAAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGAAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGA

Protein sequence

MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTFHRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFFICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES

Homology

[Close]

BLAST of ClCG06G009400.1 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-80
Identity = 139/171 (81.29%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M+NPKVFFDILIG+MKAGR+VMELFAD TP+TA NFRALCTGE GIG++GK LHYKGS F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG KF DENFK+KHTGPGILSMAN+G +TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQI 172
           ICTEKT WL+GKHVVFGKVVDGY+VV+ ME VGSD G  S+ VVIEDCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

[Close]

BLAST of ClCG06G009400.1 vs. Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.9e-79
Identity = 138/172 (80.23%), Postives = 150/172 (87.21%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFD+ I    AGRIVMEL+ADTTP+TAENFRALCTGEKG+GRSGKPLHYKGSTF
Sbjct: 1   MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HR+IP FMCQGGDFT GNGTG ESIYG KFADENF  +HTGPGILSMANAG  TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICTEKT WL+GKHVVFGKV++G +VV ++EKVGS SGKTS+ V I DCGQ+S
Sbjct: 121 ICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172

[Close]

BLAST of ClCG06G009400.1 vs. Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-78
Identity = 136/171 (79.53%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 2   SNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTFH 61
           +NPKV+FD+ +G   AGRIVMEL+ADTTP+TAENFRALCTGE+GIG+ GKPLHYKGS+FH
Sbjct: 3   TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFH 62

Query: 62  RIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFFI 121
           R+IPKFMCQGGDFT GNGTGGESIYG KF DENF  KHTGPGILSMANAG +TNGSQFFI
Sbjct: 63  RVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFI 122

Query: 122 CTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           CTEKT WL+GKHVVFG+VV+G +VV ++EKVGSDSG+TS+ VVI DCGQIS
Sbjct: 123 CTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173

[Close]

BLAST of ClCG06G009400.1 vs. Swiss-Prot
Match: CYP1_SOYBN (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.8e-78
Identity = 136/172 (79.07%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M NPKVFFD+ IG   AGRIVMEL+AD TP+TAENFRALCTGEKG+GRSGKPLHYKGS+F
Sbjct: 1   MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HR+IP FMCQGGDFT GNGTGGESIYG KFADENF  KHTGPGILSMANAG  TNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICTEKT WL+GKHVVFG+V++G +VV+++EKVGS SG+TS+ VVI +CGQ S
Sbjct: 121 ICTEKTEWLDGKHVVFGQVIEGLNVVKDIEKVGSGSGRTSKPVVIANCGQPS 172

[Close]

BLAST of ClCG06G009400.1 vs. Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-77
Identity = 135/172 (78.49%), Postives = 150/172 (87.21%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M NP+VFFD+ +G   AGRIVMELFADTTP+TAENFRALCTGEKG GRSGKPLHYK S+F
Sbjct: 1   MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HR+IP FMCQGGDFT GNGTGGESIYG KFADENF  KHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICT KT WL+GKHVVFG+VV+G  VV+ +EKVGS SG+T++ VV+EDCGQ+S
Sbjct: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172

[Close]

BLAST of ClCG06G009400.1 vs. TrEMBL
Match: B9S7J2_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.9e-88
Identity = 158/174 (90.80%), Postives = 168/174 (96.55%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGRIVMELFAD TPKTAENFRALCTGEKGIG  GKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADFTPKTAENFRALCTGEKGIGSVGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGYSVV+EMEKVGS+SG+TSQ VVIEDCGQI+E+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTSQGVVIEDCGQITEN 174

[Close]

BLAST of ClCG06G009400.1 vs. TrEMBL
Match: A0A059D3H3_EUCGR (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_B02135 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.5e-88
Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTG G+LSMANAG DTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGLGVLSMANAGPDTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EME VGSDSG T +TV IEDCGQISE+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMESVGSDSGSTRETVAIEDCGQISEN 174

[Close]

BLAST of ClCG06G009400.1 vs. TrEMBL
Match: B5LWR0_ZIZJJ (Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.1e-87
Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFR LCTGEKGIG SGKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRVLCTGEKGIGISGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG KFADENFK+KHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGTKFADENFKLKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EMEKVGSDSG+TSQ VVIEDCGQI+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQPVVIEDCGQIT 172

[Close]

BLAST of ClCG06G009400.1 vs. TrEMBL
Match: A0A067EFK3_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g030603mg PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.7e-87
Identity = 151/173 (87.28%), Postives = 167/173 (96.53%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M+NP+VFFDILIG+M  GR+VMELFAD TPKTAENFRALCTGEKGIG SGKPLHYKGSTF
Sbjct: 1   MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISE 174
           ICT+KTPWL+GKHVVFGKVVDGYSV+++MEKVGS+SG+TSQTVVIEDCGQ++E
Sbjct: 121 ICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLAE 173

[Close]

BLAST of ClCG06G009400.1 vs. TrEMBL
Match: V4VS87_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10022535mg PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-86
Identity = 150/173 (86.71%), Postives = 167/173 (96.53%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M+NP+VFFDILIG+M  GR+VMELFAD TPKTAENFRALCTGEKGIG SGKPLHYKGSTF
Sbjct: 1   MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISE 174
           ICT+KTPWL+GKHVVFGKVVDGYSV+++MEKVGS+SG+TSQTVVIEDCGQ+++
Sbjct: 121 ICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLAD 173

[Close]

BLAST of ClCG06G009400.1 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2)

HSP 1 Score: 300.4 bits (768), Expect = 7.0e-82
Identity = 139/171 (81.29%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M+NPKVFFDILIG+MKAGR+VMELFAD TP+TA NFRALCTGE GIG++GK LHYKGS F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG KF DENFK+KHTGPGILSMAN+G +TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQI 172
           ICTEKT WL+GKHVVFGKVVDGY+VV+ ME VGSD G  S+ VVIEDCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

[Close]

BLAST of ClCG06G009400.1 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3)

HSP 1 Score: 293.9 bits (751), Expect = 6.5e-80
Identity = 136/171 (79.53%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 2   SNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTFH 61
           +NPKV+FD+ +G   AGRIVMEL+ADTTP+TAENFRALCTGE+GIG+ GKPLHYKGS+FH
Sbjct: 3   TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFH 62

Query: 62  RIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFFI 121
           R+IPKFMCQGGDFT GNGTGGESIYG KF DENF  KHTGPGILSMANAG +TNGSQFFI
Sbjct: 63  RVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFI 122

Query: 122 CTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           CTEKT WL+GKHVVFG+VV+G +VV ++EKVGSDSG+TS+ VVI DCGQIS
Sbjct: 123 CTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173

[Close]

BLAST of ClCG06G009400.1 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 285.0 bits (728), Expect = 3.0e-77
Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 2   SNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTFH 61
           S+PKVFFD+ IG   AG+IVMEL+ D TPKTAENFRALCTGEKG+GRSGKPLH+KGS+FH
Sbjct: 3   SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62

Query: 62  RIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFFI 121
           R+IP FMCQGGDFTKGNGTGGESIYG KF DENF+ KHTGPGILSMANAG +TNGSQFFI
Sbjct: 63  RVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFI 122

Query: 122 CTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           CT KT WL+GKHVVFG+VV+G  VV+ +EK+GS SGK ++ VVI DCG+IS
Sbjct: 123 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of ClCG06G009400.1 vs. TAIR10
Match: AT4G38740.1 (AT4G38740.1 rotamase CYP 1)

HSP 1 Score: 273.9 bits (699), Expect = 7.0e-74
Identity = 127/172 (73.84%), Postives = 145/172 (84.30%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           M+ PKV+FD+ I    AGRIVMEL+ D TP+TAENFRALCTGEKG+G +GKPLH+KGS F
Sbjct: 1   MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HR+IP FMCQGGDFT GNGTGGESIYG KF DENF+ KHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICT KT WL+GKHVVFG+VV+G  VV+ +EKVGS SGK ++ VV+ DCGQ+S
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172

[Close]

BLAST of ClCG06G009400.1 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5)

HSP 1 Score: 273.1 bits (697), Expect = 1.2e-73
Identity = 129/172 (75.00%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNP+VFFD+ +     GRI MELFADTTP TAENFRALCTGEKG+G+ GKPLH+KGS F
Sbjct: 1   MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HR+IP FMCQGGDFT  NGTGGESIYG KF DENF  KHTG GILSMAN+G +TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICT+KT WL+GKHVVFG+VV G  VV+ +EKVGSDSGKTS+ V I DCGQ+S
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172

[Close]

BLAST of ClCG06G009400.1 vs. NCBI nr
Match: gi|1000959172|ref|XP_015576540.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ricinus communis])

HSP 1 Score: 333.2 bits (853), Expect = 2.8e-88
Identity = 158/174 (90.80%), Postives = 168/174 (96.55%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGRIVMELFAD TPKTAENFRALCTGEKGIG  GKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADFTPKTAENFRALCTGEKGIGSVGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGYSVV+EMEKVGS+SG+TSQ VVIEDCGQI+E+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTSQGVVIEDCGQITEN 174

[Close]

BLAST of ClCG06G009400.1 vs. NCBI nr
Match: gi|702270000|ref|XP_010043281.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X3 [Eucalyptus grandis])

HSP 1 Score: 332.8 bits (852), Expect = 3.6e-88
Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTG G+LSMANAG DTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGLGVLSMANAGPDTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EME VGSDSG T +TV IEDCGQISE+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMESVGSDSGSTRETVAIEDCGQISEN 174

[Close]

BLAST of ClCG06G009400.1 vs. NCBI nr
Match: gi|702269993|ref|XP_010043280.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 332.8 bits (852), Expect = 3.6e-88
Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGKPLHYKGSTF
Sbjct: 17  MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 76

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTG G+LSMANAG DTNGSQFF
Sbjct: 77  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGLGVLSMANAGPDTNGSQFF 136

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EME VGSDSG T +TV IEDCGQISE+
Sbjct: 137 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMESVGSDSGSTRETVAIEDCGQISEN 190

[Close]

BLAST of ClCG06G009400.1 vs. NCBI nr
Match: gi|702269984|ref|XP_010043279.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 332.8 bits (852), Expect = 3.6e-88
Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGKPLHYKGSTF
Sbjct: 44  MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 103

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG+KFADENFKMKHTG G+LSMANAG DTNGSQFF
Sbjct: 104 HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGLGVLSMANAGPDTNGSQFF 163

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES 175
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EME VGSDSG T +TV IEDCGQISE+
Sbjct: 164 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMESVGSDSGSTRETVAIEDCGQISEN 217

[Close]

BLAST of ClCG06G009400.1 vs. NCBI nr
Match: gi|1009117537|ref|XP_015875370.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ziziphus jujuba])

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-87
Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 1


Query: 1   MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60
           MSNPKVFFDILIG+MKAGR+VMELFAD TPKTAENFR LCTGEKGIG SGKPLHYKGSTF
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRVLCTGEKGIGISGKPLHYKGSTF 60

Query: 61  HRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFF 120
           HRIIP FMCQGGDFT+GNGTGGESIYG KFADENFK+KHTGPGILSMANAG +TNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGTKFADENFKLKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQIS 173
           ICTEKTPWL+GKHVVFGKVVDGY+VV+EMEKVGSDSG+TSQ VVIEDCGQI+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQPVVIEDCGQIT 172

The following BLAST results are available for this feature:

BLAST of ClCG06G009400.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CP19C_ARATH	1.2e-80	81.29	Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 P...	[more]
CYPH_LUPLU	8.9e-79	80.23	Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1	[more]
CP19A_ARATH	1.2e-78	79.53	Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 P...	[more]
CYP1_SOYBN	5.8e-78	79.07	Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1	[more]
CYPH_CATRO	2.9e-77	78.49	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1	[more]

BLAST of ClCG06G009400.1 vs. TrEMBL


Match Name	E-value	Identity	Description
B9S7J2_RICCO	1.9e-88	90.80	Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=...	[more]
A0A059D3H3_EUCGR	2.5e-88	89.66	Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_B02135 PE=3...	[more]
B5LWR0_ZIZJJ	2.1e-87	90.12	Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1	[more]
A0A067EFK3_CITSI	4.7e-87	87.28	Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g030603mg PE=3 ...	[more]
V4VS87_9ROSI	1.1e-86	86.71	Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10022535mg PE...	[more]

BLAST of ClCG06G009400.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56070.1	7.0e-82	81.29	rotamase cyclophilin 2	[more]
AT2G16600.1	6.5e-80	79.53	rotamase CYP 3	[more]
AT2G21130.1	3.0e-77	77.19	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT4G38740.1	7.0e-74	73.84	rotamase CYP 1	[more]
AT4G34870.1	1.2e-73	75.00	rotamase cyclophilin 5	[more]

BLAST of ClCG06G009400.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1000959172\|ref\|XP_015576540.1\|	2.8e-88	90.80	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ricinus communis]	[more]
gi\|702270000\|ref\|XP_010043281.1\|	3.6e-88	89.66	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X3 [Eucalypt...	[more]
gi\|702269993\|ref\|XP_010043280.1\|	3.6e-88	89.66	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X2 [Eucalypt...	[more]
gi\|702269984\|ref\|XP_010043279.1\|	3.6e-88	89.66	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X1 [Eucalypt...	[more]
gi\|1009117537\|ref\|XP_015875370.1\|	3.0e-87	90.12	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR020892	Cyclophilin-type_PPIase_CS
IPR024936	Cyclophilin-type_PPIase

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0016018	cyclosporin A binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG06G009400	ClCG06G009400	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG06G009400.1	ClCG06G009400.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G009400.1.cds1	ClCG06G009400.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 118..130 score: 1.2E-39coord: 60..72 score: 1.2E-39coord: 24..39 score: 1.2E-39coord: 131..146 score: 1.2E-39coord: 103..118 score: 1.2
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 14..169 score: 4.5
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 7..170 score: 44
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 55..72 scor
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PIR	PIRSF001467	Peptidylpro_ismrse	coord: 1..174 score: 1.2
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..171 score: 5.4E
None	No IPR available	PANTHER	PTHR11071:SF252	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED	coord: 1..171 score: 5.4E