ClCG06G004130.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTAGTCTTTTATTCTTCTTCTTTTACCCTTTTTCCCTCTTTATGTTCTTAATTATGCAGGAATTTGAACACATTTAATGACTTCCGGAGTGCTCTCTTTTAAGATTGGTTATGAATGTATATATAGAACTAGAAGGTTAAATATACCATAGCCCAGCTTAAGTGTTGATTTTGATATACTTTAACATGGTATTATAACAACAGATAATGGATTCAAATTCCAACTGATATTGATGTTTTTATGCAAAATGTCATGAATTAAATTTATATAGTAATCCATTTTGTGGAGTGGTAAGAATTTATATAAATATACCATTTGTGAGGAGTGCTCCAGCCCTCATTTCTAACGCCTAGGCGTCCATAAGAACTATATGAGAACATAAAGGTATATCCTATCCCTTTTCTTCTTCGAAGATTTTATTTCCCCTCCCACCAAATGTTTTGAAGCCTTGAATGTGTAGTTTTGCCCTTCTTCTTGAATGAATTAGCCATTAGGGAAGCTCCATTTTTTAGGAAGGATCTCCTCCTCTTTGACACTTACAAGAATGCCGAGCTGCGGCTTGGATTTCATTTGTTGTTTTGTTTGGATGAAATACTCTCTCCTATCATGATTGCTATCTAATTTATCAACCATGGCATTGCTATTTATTTCTCCATTCTCAAAGCTCTCTTTATTATTTCTCTATTCTCCTCTATCGTCTGTCATTTCCCCTTTATTATGTCTCCATTCCCAAAGCTCCTATGGGAGTCGCTAATAAGATGGATAGGCTGGTCAGGAATTCTTTTGGAAAGGGAGGAAGCTATCGGCCTTGTGGTCATTTGGTGAATTGGGGAAAAACCTCCCTCCATTGTCATGGAGGTCTCGGTTTTGGAGCTTTCCAGTAGAGGAATAGTGCTCTTTTACTCAAGTGGTGGTTGTGGAGATTTACACATGAAAGGATGCTTTGTGGTGAAGAGTCGTCTCGAGCATTTATGGTGAAGATCCGAAAGGGCTAAAGACCTTTTAGTCGAATTAGGAAGTTAAGTTGGATCTCTAACCTTTTCAGGCTCAACAAAATTTGCCTTTTCATGACAACAGGTGGATTTTGTGGCAAGCTGGCTTCTTCATTGTCCTTTTAAGGCATTTGGTTGGAAAGAAACAATAGAATTTTTAGGGAGACCTTGGAAGAGGTGTAGTTGCTTCTTAGGTTTAATGCCTGATTTTTTTTTTTTTTAAAATTTTTTTCTTATTTTTATATATATATATATATATATATATTAATTTTTAATTTTTTGTTTTTTTTGTTTTTTTTGTTTTTGTAGTCTTCTCTTCTTGGACTGTCTTTTATATGCTATTTTTGTATTCTTTCATTTTCTCAATGAAACCCTAAATTTCTCATTAGAAAACCAGTAAGTAGTTAGAAAATAGAGCACATTTCCTTTTGAGAACTTCTGCATTTTGAACAAGACCAAAGAGCAGTGTTACCACTAATTGAAAGAATAATCTTTCCCCTGCCAGAAGAGTTCGGTTTCAATGTTTGCAGGGATGAAACTTCAAGATTTCTTTAGGTTGATTGCAAGCTTCAAAACGATAAAACCAAATTGATGATTTTTGAAATGCACTGGATATATCCCCACAGTTTCCTCTTAGATTTTCAAAGATTTATTTTTTCCACAATACTAAGCGAGCAGCCATTGTAACTAGGTACTGCAACCGCTTTCTTATGTTTTGTAGAATCTTATTTTTCAAACTGCTTATTGGTGGTGTTATAGCTATAGCAAATTCTTTTGTAACTACCACTATCTATGATCCTTCATGATTGGAAGGCTTTTTGTGAGTAGTTGTTGGAAGGGGGAACCCTCTTTCCCTGGCCCTTAGACTGTCTTTTTTGCTTTGTGTTACATCTTCCAGGTTTCATTAAGGGGGAAAAAAATCAAACAGAAGTTAGAAGAATTTGTTTGATTGGAAATTAAAAGAATGGACTAGCCTCCCTTAGACTTTTAGAATTCATGCACTTCAAGCCATCCAAAGACGCTTTCGTGTGGTAATTCAATAGGTAAGAGGTTTTCGTGTTGGAAAACAGAGCAGTGGATGCATTCTTGTTAACCACCCACGGTTTGACTTTCTTCCCTTGCTACACCGAGCATAATATGTTGAAAAGGTCAAGGAAGACATGGAGTAGACCCCCATTTGTTGAAATCAAGGTTGAGCTACTTAAAGACCCTGATATTATCCCACGTTTCTTACTGCAACTTGCAACAAGATAAGCAACTGTCCAGGGGGCAGTTGGTACTCGAACTCTTCGTCTTTGCTCCTTACCATCATGACACCGTTACGGAGATCACTTACGTACTTACAAGTGGGTCACTAGTGAATTGTATTGGTAACAGTAAGGCATGGAAGCTGACGTCAGAAAAATATGTTGAAGCCCCAAAATCTGAAAAGATCTCTGTATGCCACTGCCCCATAATCCAGTAGCCAGCAGCCCCAAAATCTGGGATGATCTCCATATACCACCACTGAGGATCCCTGGAAATCTATTATGAAATATCAGAAACTTGTTCTTCGATTGAATCGCCTGCAAAGTTGGGGACAGGGCCAACACTCCTTTTTTGGAATGATTTTTGGCTTCTAAATGATCCCCTGGCACACGTTTTCCCTCTCTATTGAGGAAATGTGGAATGAAGTTGCAAAAACATGGAATCTTTTTTGAGAAGGAACCCCCATATCTCCTCGTTTTGGTTTAGTACCTCCCTAGGCAGAATTCTTTAGAAGCTGCTAACAAAGGACCTATTTTCCACCAGCTCTCTATTGGTCAACACATCAACAACAATCCAGATTCTACTGCCAACTTTGATGACACAATTTGGAAGGATCATGTAGCATATTTTCGGATGTTCGTCCTCTCATCATGTGATTGGAGCACAGCCCTTCCAAATGACCCACACGGTCTCCTCACATACCTTATGTCCTATCCATTCAAAAGGTAGAAGTAATTTCTTTGGTTGATATTAATTTGGGCCTTCTTTTGGAAGTTGTGGGAAGAAAGCAATCAGCAGCTTTTTAGGGATAAGTTGTTTACTTTTAATCGATTTTTTGATGCTATGGTATTTCTTATGGTTTCTTGGTGTCATGATTTTTGTCAAACATGTGAATGAATTAGTATATCTCCCCATGCTTGTAATTTCGATTGCAGCTGGTGCTGCACATTGAGCTCCTTGAGTTGTGACTTGGTCTCTTTTGTTAGCGATTGTTGCAAATGTAATTTTTACGTGCCAAGATATTGCTTTCCTGAATTTAAAGTTGTTAATCTTCATATGCACTTTTGCTTATCTTCATGTGTATTAAACATGCTTTGGCATTCCTTCGATAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGGTAATTATCCTTTGCATAGATCAACGTTTTCCTATTAGAAGTAATTACGTCCATGAAACACTCATAAGAAATTATATCAGTAGGTCCTCTATTTTTCTTTTAATCCTTTTATTTATCATTAATACCTCAAACCATGAATTTCATAACTTCATTTTTAAAAAGGCTACCAACTCACTCATCAAAAGGTTATTGTTAATGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA MLTTTMLSFLNSSEPTYSSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPITKSIISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGLSIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGEDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS
BLAST of ClCG06G004130.1 vs. TrEMBL
Match: A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 6.5e-129 Identity = 244/297 (82.15%), Postives = 258/297 (86.87%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TrEMBL
Match: M5X9F1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017230mg PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60 Identity = 125/202 (61.88%), Postives = 149/202 (73.76%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TrEMBL
Match: V4U6T6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.4e-59 Identity = 134/264 (50.76%), Postives = 176/264 (66.67%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TrEMBL
Match: A0A067HFI2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.4e-59 Identity = 134/264 (50.76%), Postives = 176/264 (66.67%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TrEMBL
Match: F6HZE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02400 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.1e-58 Identity = 134/259 (51.74%), Postives = 168/259 (64.86%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TAIR10
Match: AT4G01650.1 (AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein) HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59 Identity = 128/264 (48.48%), Postives = 170/264 (64.39%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. TAIR10
Match: AT5G08720.1 (AT5G08720.1 Streptomyces cyclase/dehydrase (InterPro:IPR005031)) HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17 Identity = 62/199 (31.16%), Postives = 96/199 (48.24%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 2.3e-16 Identity = 50/172 (29.07%), Postives = 88/172 (51.16%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. NCBI nr
Match: gi|659116819|ref|XP_008458275.1| (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]) HSP 1 Score: 478.4 bits (1230), Expect = 9.0e-132 Identity = 249/298 (83.56%), Postives = 263/298 (88.26%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. NCBI nr
Match: gi|778709027|ref|XP_004138514.2| (PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus]) HSP 1 Score: 468.4 bits (1204), Expect = 9.3e-129 Identity = 244/297 (82.15%), Postives = 258/297 (86.87%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. NCBI nr
Match: gi|1009148245|ref|XP_015891833.1| (PREDICTED: uncharacterized protein LOC107426226 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64 Identity = 147/270 (54.44%), Postives = 180/270 (66.67%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. NCBI nr
Match: gi|645242932|ref|XP_008227754.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X1 [Prunus mume]) HSP 1 Score: 242.7 bits (618), Expect = 8.3e-61 Identity = 144/298 (48.32%), Postives = 185/298 (62.08%), Query Frame = 1
BLAST of ClCG06G004130.1 vs. NCBI nr
Match: gi|645242939|ref|XP_008227757.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X2 [Prunus mume]) HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60 Identity = 141/282 (50.00%), Postives = 180/282 (63.83%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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