ClCG05G015510.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG05G015510.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRetrotransposon protein
LocationCG_Chr05 : 27334903 .. 27335883 (-)
Sequence length555
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTATGGAATTACCGAGACCAAGTTCTTATTACCATAATCAACACTACACTTTCACCATCTGTTTTCAATCACTTTACTTTCGCCACTACTACCAGAGAACTTTGGCTAAATCTTGAGACCCGATATTTTTCCAAAACTTGATTTAGTGTCTTAGAACTCAAATATGCTCTTTATATAGTCAAGAAAGAAACAACTGAAAGTGTTGAACAATATTTCTGAAAGGTAAAAGTGCTGGTTAACTGCCTTGCTACCGCCGCAGTCAAGATCAACGATGAGGTGAGTCTTCTAGATATTCTCAATGGCCTACTGATCAAGTTCAGTGCGTTTCGCATATCAATTATAACGCGTGATACAAATCTTTCTCTTGCCGAACTTGAAGTCTTACTTGATGCTGAAGCCAAGACCATGGCGTTACTCAGTCGATGGTTAAACCAACTCCGATGGCAACGACCACCTTCCAACACCTTGGTCGCAACGGTTGTGGAGTCCCCAAAAGAGGTGGCAGCCGTGGGATTCGTGGGAGAGGAGGGAATGGGAAGAGGCTTCTTCCAAAACCCTAACTTCTCAAATGGATCAACACTATGGGTCATCCTTTTCCTCATTCAATTGTGGGCCTCAACAAATTAATGGATCATCTCAGCAACAACCCAGCTTATTGGGTCATTATTCTAGATCTAATAATTATAATCATGCAAGCAAGTTTTTAGCAAAATGGGAGAATTTTCTATTAAATATGCAATAAATATGGGTGCAATAAATATGGCCACAATGCATTAGATTTTTACAATAGAATGAACTTCATTCCAAAGGCATCATCCTCCAGCTCAATTGGTTGTCATGGGGGTAAATAATATGACTCCTTAAAATTCTTCTCTTATTAATATTTTTTTGTTGTTTGATAGTGGTTGCAATGCCTATATGACAAATGACCTTATCAATATGAACCTAGCTAATGACTATAACAGTGAGGAAACG

mRNA sequence

ATGGAATTATGGAATTACCGAGACCAAGTTCTTATTACCATAATCAACACTACACTTTCACCATCTGTAAAAGTGCTGGTTAACTGCCTTGCTACCGCCGCAGTCAAGATCAACGATGAGGTGAGTCTTCTAGATATTCTCAATGGCCTACTGATCAAGTTCAGTGCGTTTCGCATATCAATTATAACGCGTGATACAAATCTTTCTCTTGCCGAACTTGAAGTCTTACTTGATGCTGAAGCCAAGACCATGGCGTTACTCAGTCGATGGTTAAACCAACTCCGATGGCAACGACCACCTTCCAACACCTTGGTCGCAACGGTTGTGGAGTCCCCAAAAGAGGTGGCAGCCGTGGGATTCGTGGGAGAGGAGGGAATGGGAAGAGGCTTCTTCCAAAACCCTAACTTCTCAAATGGATCAACACTATGGAATGAACTTCATTCCAAAGGCATCATCCTCCAGCTCAATTGGTTGTCATGGGGTGGTTGCAATGCCTATATGACAAATGACCTTATCAATATGAACCTAGCTAATGACTATAACAGTGAGGAAACG

Coding sequence (CDS)

ATGGAATTATGGAATTACCGAGACCAAGTTCTTATTACCATAATCAACACTACACTTTCACCATCTGTAAAAGTGCTGGTTAACTGCCTTGCTACCGCCGCAGTCAAGATCAACGATGAGGTGAGTCTTCTAGATATTCTCAATGGCCTACTGATCAAGTTCAGTGCGTTTCGCATATCAATTATAACGCGTGATACAAATCTTTCTCTTGCCGAACTTGAAGTCTTACTTGATGCTGAAGCCAAGACCATGGCGTTACTCAGTCGATGGTTAAACCAACTCCGATGGCAACGACCACCTTCCAACACCTTGGTCGCAACGGTTGTGGAGTCCCCAAAAGAGGTGGCAGCCGTGGGATTCGTGGGAGAGGAGGGAATGGGAAGAGGCTTCTTCCAAAACCCTAACTTCTCAAATGGATCAACACTATGGAATGAACTTCATTCCAAAGGCATCATCCTCCAGCTCAATTGGTTGTCATGGGGTGGTTGCAATGCCTATATGACAAATGACCTTATCAATATGAACCTAGCTAATGACTATAACAGTGAGGAAACG

Protein sequence

MELWNYRDQVLITIINTTLSPSVKVLVNCLATAAVKINDEVSLLDILNGLLIKFSAFRISIITRDTNLSLAELEVLLDAEAKTMALLSRWLNQLRWQRPPSNTLVATVVESPKEVAAVGFVGEEGMGRGFFQNPNFSNGSTLWNELHSKGIILQLNWLSWGGCNAYMTNDLINMNLANDYNSEET
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG05G015510ClCG05G015510gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG05G015510.1ClCG05G015510.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G015510.1.cds4ClCG05G015510.1.cds4CDS
ClCG05G015510.1.cds3ClCG05G015510.1.cds3CDS
ClCG05G015510.1.cds2ClCG05G015510.1.cds2CDS
ClCG05G015510.1.cds1ClCG05G015510.1.cds1CDS