ClCG05G008660.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G008660.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Plastid division protein PDV1
Location	CG_Chr05 : 9360422 .. 9363123 (-)
Sequence length	1501

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCTTCTTCTTCTTCTTCTTCTTCCCTCTCTTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCCAACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACGCTACTGCCTTCCCTTTCATCAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCACGAGGCTAGAAGTCTAAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATGTTTCTTTTTCTCCCCTTTTTTTCTGCGCCTTCTTTTAATTCACTCTTTTCTTTAGTTTATCAGTGTGTAATTTCAAGGCAGACACAACAGGACGACTTTTGTTTCCATCTTATTGGGGATTTCATTATTTAGCTATGTTTACGATTCTATTAGGTGATCTTTCTTGCTTTCCAGTTGGAATTAATTTGGTCATTTATGAATTTCTTTGTTTGCTGCTGTCTGGAAGACTGAAGGGAGGGAGGAGTTCTAGGTTCACTATTCTTTCCCTTCCTTGATTTTTGTTCTGCGTCATTGTCCATTTTGTCTAAAGATGGGACGGAGTGCTAATTTCTTGTAGCGACTGTTTTCCTTTCGTTTGTGCTTATTGGAGGCTTGTATTGATTATGATCTTACAGGAGTTTCCTTTTCATTTATGAAATCTTAGTTTCAAAAATGAAAATGAAAGTCCTGTAAAAACAATTTCAAAAATGAAAATGAAACTCCCGTAAGAACCATTTATGAAATCTTAGTAGAATTAGGTCTACCAACTGTATGTCCATACAGCCATAAAATTTTCTACTTTGATTTTTGAATAAATGAAAATATGTAATCACACAAAACAAAACGGCTCTGTCTATCCATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAAATATTTTCGGTTCAATCATAGCGCCATTGGGAGTCAGTAATTGGCAATGTTTAATCCATCCAACCGAAGTTTTTTCTTTTTTTCCTTTTCTTTTTTTGAAGAGTAAACTGCAATTTAGAACAATGGGAGTTTTTCATTCCTACAGAAATCATGACTTGAACCCTTATATATGTTGAACTCTACGAGTCATTCAGTGACTAGTTGAGAGTCTCCTAAGCAATGGAAGGTCGGTTTCTTTGTATGCTCTTGATATTTTCTTTCATTTTGCTCAATGAAAGCTCGGTTTCTTGCAATTAAGAAAAAAAAAAAGGGCTTCTTATTGGTAGTGCAAATTAAATATAGGTTTCGTAGCCTAGAGGACCTGCAACTTCATGTTCCACTCGTGGTTGCCTTGTTTCCAAATGAAAGCAGTAATGAGCTGCATTCTTATGTTACTTCTCACTTTTGGGGTTATGATGATAAATATTTCATTGGGGAGAATATTATTGTTCAAGTCTCGACAATTGACTCACTGAATTCTTTCTTTCTGTTTGCAGACTGTTCAAGTACAACAGCAGGTTGAGAGAGATGCTGCAATAGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTACAAAGTCATCAGTGAAGCTTTGGCGTTTGTTGGAGATGTACGTTATGCAACTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCTAACGGTCAGAAGTCTATGCCGAACAGTTCAACAAGGTCCAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTACCATGCTAGCATTTCTACATCTCCACCAGGTAGCTTACAAGGAGTCACCGCTGGAGAGAGACGATATTCCCTTCAACAGAAACCTCCGAAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGATGTGTTATCCGCAAGGGGTTAGTGTGAATATATTAAAATTCTCGAGCTTTGATGCATCTCTTATCTGTTTCTTTAAATGTGAGCTGGCTGTCGTGTGGAATTTGGAAAGAGTCAAATGTGATAATGTCTGTTGTATTAAAATTATTTGATTAAGTAGTTAGAAAATATCTTCATCCTTCTTGAGGTTGTCACGTCTATTGGATTGAGAGTTTTAAATCTTGTGTCCATTGAGTTGTTCAACAAACAAAAATCATCATGAGTGTCTATCTTGCCAAGATTTCTCAAGTGATCAAGCAAGGATATGTATGCCTGTTGGGCCTGATTTCAATCCTCTCCCCATATGGGCTTCAACTTGAGAGACCCAATTGTTAAATTTTGAACCTTTAGATTGGGGCCCATTAAGCACTGTAAGAACAAATGATAGAAAAGCTACAAGAATGGCCCAAAAAAGATGAAGGAATTGATGAAGAAACCAAATCTTCTTCGACCATGTGTCTGAACAAAAAAGTTGTTATTTGTTGAAGGAAGATCAAAGGGGGAGAAAATGATAAATTGGAAATTGATAATGCAAAGATATGTCGGTGAAGTGTTTGATATTGATTTGGTTTTGTGAGGCTCTTATAGGGGGTTTGAACGCCTGATTTGTAG

mRNA sequence

TTTTTCTTCTTCTTCTTCTTCTTCTTCCCTCTCTTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCCAACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACGCTACTGCCTTCCCTTTCATCAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCACGAGGCTAGAAGTCTAAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACTGTTCAAGTACAACAGCAGGTTGAGAGAGATGCTGCAATAGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTACAAAGTCATCAGTGAAGCTTTGGCGTTTGTTGGAGATGTACGTTATGCAACTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCTAACGGTCAGAAGTCTATGCCGAACAGTTCAACAAGGTCCAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTACCATGCTAGCATTTCTACATCTCCACCAGGTAGCTTACAAGGAGTCACCGCTGGAGAGAGACGATATTCCCTTCAACAGAAACCTCCGAAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGATGTGTTATCCGCAAGGGGTTAGTGTGAATATATTAAAATTCTCGAGCTTTGATGCATCTCTTATCTGTTTCTTTAAATGTGAGCTGGCTGTCGTGTGGAATTTGGAAAGAGTCAAATGTGATAATGTCTGTTGTATTAAAATTATTTGATTAAGTAGTTAGAAAATATCTTCATCCTTCTTGAGGTTGTCACGTCTATTGGATTGAGAGTTTTAAATCTTGTGTCCATTGAGTTGTTCAACAAACAAAAATCATCATGAGTGTCTATCTTGCCAAGATTTCTCAAGTGATCAAGCAAGGATATGTATGCCTGTTGGGCCTGATTTCAATCCTCTCCCCATATGGGCTTCAACTTGAGAGACCCAATTGTTAAATTTTGAACCTTTAGATTGGGGCCCATTAAGCACTGTAAGAACAAATGATAGAAAAGCTACAAGAATGGCCCAAAAAAGATGAAGGAATTGATGAAGAAACCAAATCTTCTTCGACCATGTGTCTGAACAAAAAAGTTGTTATTTGTTGAAGGAAGATCAAAGGGGGAGAAAATGATAAATTGGAAATTGATAATGCAAAGATATGTCGGTGAAGTGTTTGATATTGATTTGGTTTTGTGAGGCTCTTATAGGGGGTTTGAACGCCTGATTTGTAG

Coding sequence (CDS)

ATGAAATGGGACATGGAAATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCCAACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACGCTACTGCCTTCCCTTTCATCAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCACGAGGCTAGAAGTCTAAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACTGTTCAAGTACAACAGCAGGTTGAGAGAGATGCTGCAATAGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTACAAAGTCATCAGTGAAGCTTTGGCGTTTGTTGGAGATGTACGTTATGCAACTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCTAACGGTCAGAAGTCTATGCCGAACAGTTCAACAAGGTCCAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTACCATGCTAGCATTTCTACATCTCCACCAGGTAGCTTACAAGGAGTCACCGCTGGAGAGAGACGATATTCCCTTCAACAGAAACCTCCGAAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGATGTGTTATCCGCAAGGGGTTAG

Protein sequence

MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLERDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG

Homology

[Close]

BLAST of ClCG05G008660.1 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-70
Identity = 143/271 (52.77%), Postives = 186/271 (68.63%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPDATA 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S  + +    +       
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  FPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQS 123
           + FI  F +D +DS I EA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQS
Sbjct: 63  YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQS 122

Query: 124 RIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNSSTR 183
           RI+LAMRLAEHHGKNY V+ EALAFVG ++  ++YVS +  Y    +P+G  S+P+    
Sbjct: 123 RILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPD-GIE 182

Query: 184 SNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLERDDIP 243
           SN +I    ST  FA+++L  +HV G+LGNAA+ AI+++A LHLHQVA  E  L++ +  
Sbjct: 183 SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDR 242

Query: 244 FNRN-LRRTSRLEESSPNEDFSNFDVLSARG 274
           F R+  R+T   ++SS +    + DV+ ARG
Sbjct: 243 FYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of ClCG05G008660.1 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.6e-132
Identity = 245/278 (88.13%), Postives = 256/278 (92.09%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKS-----NNKDSNKTP 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKS     NNKDSN TP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NALPDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
             LP    FPFI+EFR+DLDDSAI EARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYA NYVS E + GP+FSPNGQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 SMPNSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKES 240
            +PNSS RSNTLIKMLFSTL+FARKSLKMDHVGGILGNAAMVAI+M+AFLHLHQVAYK +
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 PLERDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           PLERDDIPFNRNLRRTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of ClCG05G008660.1 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.2e-86
Identity = 173/274 (63.14%), Postives = 204/274 (74.45%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPD 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKS+ K          +
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKKKLYNDAVGDDN 60

Query: 61  ATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 120
              F F+ +FRID  +SAI EA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAIARL
Sbjct: 61  RAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIARL 120

Query: 121 EQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNS 180
           EQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS E  Y    SP+G+    + 
Sbjct: 121 EQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLASHE 180

Query: 181 STRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKE-SPLER 240
             RSN LIK+L S+LNFA+KSLK DH+GGIL NAA+ A++M+A LHLHQ+AY E S  + 
Sbjct: 181 GKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEKQE 240

Query: 241 DDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           DDI   R +R+ S+L   S  +  ++ DV SARG
Sbjct: 241 DDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of ClCG05G008660.1 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.0e-85
Identity = 176/276 (63.77%), Postives = 210/276 (76.09%), Query Frame = 1


Query: 5   MEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPDAT-A 64
           MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKS   D +K  N + +    
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKS---DKSKPLNDVDENRFG 60

Query: 65  FPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQS 124
           F +  +FR++ DD AI EA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIARLEQS
Sbjct: 61  FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLEQS 120

Query: 125 RIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNSSTR 184
           RIVLA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +  +GP  SP G+   P+   R
Sbjct: 121 RIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEEKR 180

Query: 185 SNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYK-----ESPLE 244
           SN LIK+L S  NF +KSLK+DH+GGILGNAA+VA++MLA LHL+QV YK     E P +
Sbjct: 181 SNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPPQK 240

Query: 245 RDD-IPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           R+D I  NRN++RTSR+E SS + + +  DVL ARG
Sbjct: 241 REDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

[Close]

BLAST of ClCG05G008660.1 vs. TrEMBL
Match: A0A0D2TDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-83
Identity = 166/275 (60.36%), Postives = 208/275 (75.64%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKD--SNKTPNAL 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L++S+ K   ++    A 
Sbjct: 4   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALKESDKKKLYNDVVVGAD 63

Query: 61  PDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
            + T F ++ EFRID  DSAI EA+SLNAIRTALENLEDQLEFFHTVQ+QQ+VERDAAIA
Sbjct: 64  DNRTGFVYVKEFRIDDGDSAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRVERDAAIA 123

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMP 180
           RLEQSRI+LA+RLA+HHGK YKVI EALAFVGDV  A+ Y+S +  Y    SP+G+    
Sbjct: 124 RLEQSRIILALRLADHHGKKYKVIDEALAFVGDVHDASRYISPKNLYCSPISPSGENLAS 183

Query: 181 NSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLE 240
           +    +N LIK++ S+ N+A+KSLK DH+GGIL NAA+ A++M+A +HLHQ+A+ +   E
Sbjct: 184 HEGKHTNMLIKLIVSSFNYAKKSLKFDHMGGILSNAAIFAVSMIAMMHLHQIAFTDGRPE 243

Query: 241 RDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
            ++I   RN R+ S+LE  S  +  S+ DV  ARG
Sbjct: 244 -ENINNRRNPRKNSQLEGPSSYDHSSHLDVYLARG 277

[Close]

BLAST of ClCG05G008660.1 vs. TrEMBL
Match: A0A0B0NFJ3_GOSAR (Plastid division PDV1-like protein OS=Gossypium arboreum GN=F383_13427 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.5e-83
Identity = 165/275 (60.00%), Postives = 205/275 (74.55%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKD--SNKTPNAL 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L+KS+ K    +    A 
Sbjct: 4   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALKKSDKKKLYDDVVVGAD 63

Query: 61  PDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
            + T F F+ EFRID  DSAI EA+SLN IRTALENLEDQLEFFHTVQ+QQ+ ERDAAIA
Sbjct: 64  DNRTGFVFVKEFRIDDGDSAIQEAKSLNDIRTALENLEDQLEFFHTVQIQQRAERDAAIA 123

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMP 180
           RLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+ Y+S +  Y    SP+G+    
Sbjct: 124 RLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASRYISPKNLYCSPISPSGENLAS 183

Query: 181 NSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLE 240
           +    +N LIK++ S+ N+A+KSLK +H+GGIL NAA+ A++M+A +HLHQ+A+ +  + 
Sbjct: 184 HEGKHTNMLIKLIVSSFNYAKKSLKFEHMGGILSNAAIFAVSMIAMMHLHQIAFTDG-IP 243

Query: 241 RDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
            ++I   RN R+ S+LE  S  +  S+ DV  ARG
Sbjct: 244 EENINNRRNPRKNSQLEGPSSYDHSSHLDVYLARG 277

[Close]

BLAST of ClCG05G008660.1 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1)

HSP 1 Score: 268.1 bits (684), Expect = 6.0e-72
Identity = 143/271 (52.77%), Postives = 186/271 (68.63%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPDATA 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S  + +    +       
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  FPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQS 123
           + FI  F +D +DS I EA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQS
Sbjct: 63  YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQS 122

Query: 124 RIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNSSTR 183
           RI+LAMRLAEHHGKNY V+ EALAFVG ++  ++YVS +  Y    +P+G  S+P+    
Sbjct: 123 RILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPD-GIE 182

Query: 184 SNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLERDDIP 243
           SN +I    ST  FA+++L  +HV G+LGNAA+ AI+++A LHLHQVA  E  L++ +  
Sbjct: 183 SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDR 242

Query: 244 FNRN-LRRTSRLEESSPNEDFSNFDVLSARG 274
           F R+  R+T   ++SS +    + DV+ ARG
Sbjct: 243 FYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of ClCG05G008660.1 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.7e-132
Identity = 245/278 (88.13%), Postives = 256/278 (92.09%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKS-----NNKDSNKTP 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKS     NNKDSN TP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NALPDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
             LP    FPFI+EFR+DLDDSAI EARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYA NYVS E + GP+FSPNGQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 SMPNSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKES 240
            +PNSS RSNTLIKMLFSTL+FARKSLKMDHVGGILGNAAMVAI+M+AFLHLHQVAYK +
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 PLERDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           PLERDDIPFNRNLRRTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of ClCG05G008660.1 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 478.4 bits (1230), Expect = 8.3e-132
Identity = 244/279 (87.46%), Postives = 256/279 (91.76%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKS------NNKDSNKT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKS      NNKDSN  
Sbjct: 32  MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 91

Query: 61  PNALPDATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           P  LP    FPFI+EFR+DLDDSAI EARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 92  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 151

Query: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQ 180
           AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYA NYVSHE + GP+FSP GQ
Sbjct: 152 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 211

Query: 181 KSMPNSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKE 240
           K +PNSS RSNTLIKMLFST++FARKSLKMDHVGGILGNAAMVAI+M+AFLHLHQVAYK 
Sbjct: 212 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 271

Query: 241 SPLERDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           +PLERDDIPF+RNLRRTSRL+ESS NEDFSNFDVLSARG
Sbjct: 272 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 310

[Close]

BLAST of ClCG05G008660.1 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera])

HSP 1 Score: 330.9 bits (847), Expect = 2.1e-87
Identity = 179/280 (63.93%), Postives = 214/280 (76.43%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPD 60
           MKW+MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKS   D +K  N + +
Sbjct: 1   MKWEMEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKS---DKSKPLNDVDE 60

Query: 61  AT-AFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIAR 120
               F +  +FR++ DD AI EA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIAR
Sbjct: 61  NRFGFVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIAR 120

Query: 121 LEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPN 180
           LEQSRIVLA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +  +GP  SP G+   P+
Sbjct: 121 LEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPH 180

Query: 181 SSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYK-----E 240
              RSN LIK+L S  NF +KSLK+DH+GGILGNAA+VA++MLA LHL+QV YK     E
Sbjct: 181 EEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLE 240

Query: 241 SPLERDD-IPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
            P +R+D I  NRN++RTSR+E SS + + +  DVL ARG
Sbjct: 241 PPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277

[Close]

BLAST of ClCG05G008660.1 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao])

HSP 1 Score: 327.0 bits (837), Expect = 3.1e-86
Identity = 173/274 (63.14%), Postives = 204/274 (74.45%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPD 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKS+ K          +
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKKKLYNDAVGDDN 60

Query: 61  ATAFPFINEFRIDLDDSAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 120
              F F+ +FRID  +SAI EA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAIARL
Sbjct: 61  RAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIARL 120

Query: 121 EQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMPNS 180
           EQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS E  Y    SP+G+    + 
Sbjct: 121 EQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLASHE 180

Query: 181 STRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKE-SPLER 240
             RSN LIK+L S+LNFA+KSLK DH+GGIL NAA+ A++M+A LHLHQ+AY E S  + 
Sbjct: 181 GKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEKQE 240

Query: 241 DDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
           DDI   R +R+ S+L   S  +  ++ DV SARG
Sbjct: 241 DDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of ClCG05G008660.1 vs. NCBI nr
Match: gi|645258222|ref|XP_008234788.1| (PREDICTED: plastid division protein PDV1 [Prunus mume])

HSP 1 Score: 324.7 bits (831), Expect = 1.5e-85
Identity = 172/275 (62.55%), Postives = 213/275 (77.45%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSNNKDSNKTPNALPD 60
           MKWDMEIE+IEAVLEKIWDLHDK+S+AIHSISR HFL+S   LR S+ K  +    A+ +
Sbjct: 1   MKWDMEIEDIEAVLEKIWDLHDKISDAIHSISRAHFLSSVNALRSSDKKKPHANDVAVDE 60

Query: 61  -ATAFPFINEFRIDLDD-SAIHEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
             T + ++ +FR D DD S I EA+SLNAIRTALENLEDQLEFFHTVQVQQ+ ERDAAIA
Sbjct: 61  NRTGYVYVKDFRHDHDDDSVIREAKSLNAIRTALENLEDQLEFFHTVQVQQRAERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYATNYVSHEKQYGPQFSPNGQKSMP 180
           RLEQSR VLAMRL+EHHGK Y+VI EALAFVGDV  A+ +VS E  YGP  SP+ +K   
Sbjct: 121 RLEQSRKVLAMRLSEHHGKKYQVIEEALAFVGDVCDASRFVSPENLYGPPISPSAEKLEA 180

Query: 181 NSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAAMVAITMLAFLHLHQVAYKESPLE 240
               RSN +IK+L S++NFA+KSLK+D++GGILGNA +VA++M+A +HL+QVA +E P +
Sbjct: 181 CEGKRSNIIIKVLISSINFAKKSLKLDNMGGILGNAGLVAVSMIALVHLNQVAMREHPQK 240

Query: 241 RDDIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 274
            ++   NRN R+TSR+E +S    FSN DVL ARG
Sbjct: 241 LEE---NRNARKTSRVEGTSSTGRFSNLDVLLARG 272

The following BLAST results are available for this feature:

BLAST of ClCG05G008660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDV1_ARATH	1.1e-70	52.77	Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1	[more]

BLAST of ClCG05G008660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6_CUCSA	2.6e-132	88.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1	[more]
A0A061G8R9_THECC	2.2e-86	63.14	Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1	[more]
E0CUK8_VITVI	7.0e-85	63.77	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=...	[more]
A0A0D2TDP8_GOSRA	2.9e-83	60.36	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1	[more]
A0A0B0NFJ3_GOSAR	8.5e-83	60.00	Plastid division PDV1-like protein OS=Gossypium arboreum GN=F383_13427 PE=4 SV=1	[more]

BLAST of ClCG05G008660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	6.0e-72	52.77	plastid division1	[more]

BLAST of ClCG05G008660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463466\|ref\|XP_004149455.1\|	3.7e-132	88.13	PREDICTED: plastid division protein PDV1 [Cucumis sativus]	[more]
gi\|659077677\|ref\|XP_008439328.1\|	8.3e-132	87.46	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
gi\|225462701\|ref\|XP_002266963.1\|	2.1e-87	63.93	PREDICTED: plastid division protein PDV1 [Vitis vinifera]	[more]
gi\|590673617\|ref\|XP_007038943.1\|	3.1e-86	63.14	Plastid division protein PDV1 [Theobroma cacao]	[more]
gi\|645258222\|ref\|XP_008234788.1\|	1.5e-85	62.55	PREDICTED: plastid division protein PDV1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G008660	ClCG05G008660	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G008660.1	ClCG05G008660.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008660.1.three_prime_UTR1	ClCG05G008660.1.three_prime_UTR1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008660.1.cds2	ClCG05G008660.1.cds2	CDS
ClCG05G008660.1.cds1	ClCG05G008660.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008660.1.five_prime_UTR1	ClCG05G008660.1.five_prime_UTR1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 6..258 score: 5.3E
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 6..258 score: 5.3E