ClCG05G008360.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG05G008360.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 9028778 .. 9031861 (-)
Sequence length2324
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTTTCTTGCTTCCCGGAGGTAAATTTGGCCTTGTAGAATCTTCTTCAAGTTTGAGGGGGGGTGTCAAAGGACACAAAATGCTACCCCTCAAACTTCTCGACCAATTGTATCTCATACTTGAAACTTTCAGATTCTCTTCACTCACTCTGTATTTGTAGATTGTAGTCTTGCTCTTTATCAAGATTTCTAGCCAGAGAATGAAAGTTGTAGTAGGATCCCAAGTAAGTTTTCTTATCAAAATCAAATTCACTGTTACTATTATTGACTGGGAGCACATGCACGTTGATATTCTTGAAATGGAGGTGTTAAGGTTGGTAAATTCCTTAAATGCTGTTGAAATGGTCCGGGTATGACTCTTTGCTCAACCTTTCATGGGGTCAGTCAGGGGGCTCTAATGTCTACTCTCGGGAAATTCTTGAATAAAGTCGAGGCCAACAGACATATTGTATGGTTGATACTGTATTCTCTCACCATACTGTATGGTTGATTGATACTATATGAAATGTATACTTTTTGAGCTAGTATCAGCATAATATTTCTACGGCTTTTCTTATATTATGTGATTATTGTAAACTTAAATGCCTGCACTAATTTGTACTGAAGACGTGATACTTTGGAAGTAGTATTCGTGTGTGCTAGGAATCTGTGCTGGACCGCTGGTTTTGGATAGGTACAACTGATGGAAAAAAGAAGAAAAGAAAATCTCACCGTATGGCCTGTTGAACCATATGGCTAAAAGAAACCCCCTAGTGGGTGTCCCCTAAAATTATTAATGCTTATTAAATGCAACGAACAAAATGTATTTCAACCCCACAACCCCACAACACCAAGCTTTCTCTAGTAGAAGAGATTCTAGAGCTTGCTAAGTCCCGTCCTTAGCTCATTTATATTAATATTTTTTCCAACTTGGTTATTCCACTCAATGTCTATTTCTTTCATTATTAATTCCCATTGATGACCGTAGTAATGGAGCATGTTCCTTAATTGATTACATGACAAGATATTAGCCTTGAGCCTTTGAGTGAGTTGTAATGATACAAAGTCAAAGCCATTGAGAAAGCCCTGATACCAAATGACCTGACAACCTTTGTAAGAAAAACTTCCTAAGCGCACGTGGTAACGCCTAGTAAACATACAAGGAATCACTCTAGGAGAAGAAGAAAGGACTAACCTTGATGGTCAAGTCTTTGAAAAGGGAGACTCATTCTCAATCTAAAGTAAAAAACACTCCACAAGTTTGTATGTCTCTAAGGAACATGCAACATACTCTTGATATGGAGAAAAGTGAGGAACTCTCCCCTTTTTCATTTTACCAAAATGTCAAACCTCTGATATCTACAAATGAGAGGGCTTTAAAAGAAAATAAAGTAAACCCTAAAACTAACCTAACATAGTGTTTAGTTACAAGTAATCTGAGGGTCTGTAAAATGAGCCAATGAAATACATTTGACTCCACTTCTGGGCCTAAGAACTTAATAACATATTAAAAGTAAAGTACAAGGTAAGGTTGAAGGGATATTTTACAAGATAAAACACCCCTAAACCTCATATAATCCCTAAATCGAAGCTTTTGAAAATTGGTGTCTTCATGTTTCTTTTCTCCACTTGTTCTCCTTTCTCTTGAAGTTCCATATCTCAAGTGTTGATGTGAAGATCCCTTTCTTCTGTGATTGGTCCTAGTTCCATCACGTGTCTTGCTTGAAGCATTTCATGTAAGATTCCAATTCTGATTCCATCAATCTTCAAAGCTATATGCTAATGATCACAGGACAACTTAAAAAATCTCAAGCATTAGTGATTAGATGATTAGATGTTAGTAGATACGACTACGCAATGAGGTATGATTGCATTTCGACCACAACCCTAGTTGTGTTTAACTCTTGATGCAGGCTTTAACTCCTTAAAGGGAAGTCAATGAGAAGTAACTCGACATTACAAGATCATTAACTTGAAGATTGATTGAAGTTTCAGCTATTGATATCGCAAAATGATTCTCCTCTCTTATTAACATCTTCCACTATCTCTCATATGTCTACCTATACACTCTTTTCAATATAGCGAATTCTGTCGATGAACTTTGTGCTGCATTTTCTCTGATGGAATGAGAACAAAACTAGATAAATACCAAATCTGCTGGTGAAGGACATAATGATTCGTTTCAATGCAGATGGGAGGATAGACCATGGGAAGCTTCCATCAATAATCAAACCAGTTGGAATTTCGCAACTACTTCCCTTTGAGAACAAACAAGGTAATTATACTTTTATGACAATATTTTCCTTCAAAAATTAATAAAATTTTCTGGAAAAATGAACAAATAATTAGTTTTTTTTTCTTTTTCCCCCTGAATGTGTGCCATTATATTTTCGATTATATTCTCGACTAAAAGAGTAGGGGACAATCACGTCACTTCTTGCTTCACAGAATATCAAAGCTATCAATTATGATGCCTTTAAGGCAAAGCCTATATTTGCTACCCAACATGAGTGAAAGCACTTAGAGATCAATATTGGCCGAAGGAGATGAAAGGATAAAGAAAGAAAAAGGTTATGTCCTATTCACGTTGGATTTATTCTATTTTGATATTTCCCCCCCTATTGTTACTTGTTTTTTCTTAGAGGTATATATATTTTTTATTCTAAAAATAGGTCAATTTGTTATTTGGTTACGAATCAAGTTAAACAAAGCTTTGTTGTTGTTTCATTTTTTTACTAAAAATAAATAAATAAATAAATAAATAAATAAATAAAATGACTGGATTAATAATTGTATTCCTATGCTTTGACGGTTGGTTGATTGACCTTTAAGATGTTATCGGTCTTTTTTTCTTTTTTGGGAAAAATTATAGGTCCAATGTCCTATATACAAATATTCACATACTAAAAAAAAGATCATATTAAATGGGAAGAAATCAATATATTTCCTCTAAAGACAATATTAGTCCCTAAATTTGATTACTATAATAGAATATTTTGTGACCAATAATTCATTCATGAAAGAAAAACGGTAAGCAAAAGCAAGTTGGGAAGTGGGCCAGCCGATTCGAGCCGAGCGAGCCGCCAAGAAGGTGTCAGCCAGATAA

mRNA sequence

ACGTTTCTTGCTTCCCGGAGGTAAATTTGGCCTTGTAGAATCTTCTTCAAGTTTGAGGGGGGGTGTCAAAGGACACAAAATGCTACCCCTCAAACTTCTCGACCAATTGTATCTCATACTTGAAACTTTCAGATTCTCTTCACTCACTCTGTATTTGTAGATTGTAGTCTTGCTCTTTATCAAGATTTCTAGCCAGAGAATGAAAGTTGTAGTAGGATCCCAAGTAAGTTTTCTTATCAAAATCAAATTCACTGTTACTATTATTGACTGGGAGCACATGCACGTTGATATTCTTGAAATGGAGGTGTTAAGGTTGGTAAATTCCTTAAATGCTGTTGAAATGGTCCGGGTATGACTCTTTGCTCAACCTTTCATGGGGTCAGTCAGGGGGCTCTAATGTCTACTCTCGGGAAATTCTTGAATAAAGTCGAGGCCAACAGACATATTGTATGGTTGATACTGTATTCTCTCACCATACTGTATGGTTGATTGATACTATATGAAATGTATACTTTTTGAGCTAGTATCAGCATAATATTTCTACGGCTTTTCTTATATTATGTGATTATTGTAAACTTAAATGCCTGCACTAATTTGTACTGAAGACGTGATACTTTGGAAGTAGTATTCGTGTGTGCTAGGAATCTGTGCTGGACCGCTGGTTTTGGATAGGTACAACTGATGGAAAAAAGAAGAAAAGAAAATCTCACCGTATGGCCTGTTGAACCATATGGCTAAAAGAAACCCCCTAGTGGGTGTCCCCTAAAATTATTAATGCTTATTAAATGCAACGAACAAAATGTATTTCAACCCCACAACCCCACAACACCAAGCTTTCTCTAGTAGAAGAGATTCTAGAGCTTGCTAAGTCCCGTCCTTAGCTCATTTATATTAATATTTTTTCCAACTTGGTTATTCCACTCAATGTCTATTTCTTTCATTATTAATTCCCATTGATGACCGTAGTAATGGAGCATGTTCCTTAATTGATTACATGACAAGATATTAGCCTTGAGCCTTTGAGTGAGTTGTAATGATACAAAGTCAAAGCCATTGAGAAAGCCCTGATACCAAATGACCTGACAACCTTTGTAAGAAAAACTTCCTAAGCGCACGTGGTAACGCCTAGTAAACATACAAGGAATCACTCTAGGAGAAGAAGAAAGGACTAACCTTGATGGTCAAGTCTTTGAAAAGGGAGACTCATTCTCAATCTAAAGTAAAAAACACTCCACAAGTTTGTATGTCTCTAAGGAACATGCAACATACTCTTGATATGGAGAAAAGTGAGGAACTCTCCCCTTTTTCATTTTACCAAAATGTCAAACCTCTGATATCTACAAATGAGAGGGCTTTAAAAGAAAATAAAGTAAACCCTAAAACTAACCTAACATAGTGTTTAGTTACAAGTAATCTGAGGGTCTGTAAAATGAGCCAATGAAATACATTTGACTCCACTTCTGGGCCTAAGAACTTAATAACATATTAAAAGTAAAGTACAAGGTAAGGTTGAAGGGATATTTTACAAGATAAAACACCCCTAAACCTCATATAATCCCTAAATCGAAGCTTTTGAAAATTGGTGTCTTCATGTTTCTTTTCTCCACTTGTTCTCCTTTCTCTTGAAGTTCCATATCTCAAGTGTTGATGTGAAGATCCCTTTCTTCTGTGATTGGTCCTAGTTCCATCACGTGTCTTGCTTGAAGCATTTCATGTAAGATTCCAATTCTGATTCCATCAATCTTCAAAGCTATATGCTAATGATCACAGGACAACTTAAAAAATCTCAAGCATTAGTGATTAGATGATTAGATGTTAGTAGATACGACTACGCAATGAGGTATGATTGCATTTCGACCACAACCCTAGTTGTGTTTAACTCTTGATGCAGGCTTTAACTCCTTAAAGGGAAGTCAATGAGAAGTAACTCGACATTACAAGATCATTAACTTGAAGATTGATTGAAGTTTCAGCTATTGATATCGCAAAATGATTCTCCTCTCTTATTAACATCTTCCACTATCTCTCATATGTCTACCTATACACTCTTTTCAATATAGCGAATTCTGTCGATGAACTTTGTGCTGCATTTTCTCTGATGGAATGAGAACAAAACTAGATAAATACCAAATCTGCTGGTGAAGGACATAATGATTCGTTTCAATGCAGATGGGAGGATAGACCATGGGAAGCTTCCATCAATAATCAAACCAGTTGGAATTTCGCAACTACTTCCCTTTGAGAACAAACAAGCAAAAGCAAGTTGGGAAGTGGGCCAGCCGATTCGAGCCGAGCGAGCCGCCAAGAAGGTGTCAGCCAGATAA

Coding sequence (CDS)

ATGATTCGTTTCAATGCAGATGGGAGGATAGACCATGGGAAGCTTCCATCAATAATCAAACCAGTTGGAATTTCGCAACTACTTCCCTTTGAGAACAAACAAGCAAAAGCAAGTTGGGAAGTGGGCCAGCCGATTCGAGCCGAGCGAGCCGCCAAGAAGGTGTCAGCCAGATAA

Protein sequence

MIRFNADGRIDHGKLPSIIKPVGISQLLPFENKQAKASWEVGQPIRAERAAKKVSAR
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG05G008360ClCG05G008360gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG05G008360.1ClCG05G008360.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G008360.1.cds2ClCG05G008360.1.cds2CDS
ClCG05G008360.1.cds1ClCG05G008360.1.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G008360.1.five_prime_UTR1ClCG05G008360.1.five_prime_UTR1five_prime_UTR