ClCG05G008270.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G008270.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr05 : 8961817 .. 8963653 (+)
Sequence length	1042

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTGAAGAAATCGCCCGAAATTCTTTCACTAGAAATTGAAGAAAGTCGAGATCAAGGAATTTGTGACTGTGAGTTTCTCTTTAACTCTACCTTTTGAGGCTGTTGTTTTGATTACTGTGTGATTCTTTGTTTAATCGATAAACAGATGAACAGAAAGAAATTGTTGAAAAGTGATGAAAAAGATTTTAGGGTTTAGTTTGGTCAAAGTGGCTATCGGAAATTTATTGTCATTTCTTTTGGCCTATGTCGTCGATGGATGATGAAATGAGAATCTGGAGACATTTCATAATGTAAAATTAGGGTTGTTCTGTATGTACCTTTTAAATTTGATTCTCCGTTTTTGAGATTGCTAAACAATGATCTGAAATCAGGAAAGATTTTCATTGCAGATTGAGAACGAAAGATTAAGAAAAGGGGAAAGATTAGCCTTAGGCAATCTTCACTCATAATGGGATGATTTTAGTTTCTTGTAACCTAAAATTGAATTTCGTACTTACTTTCGTTGGTATCATGGAGCATGTAGGCCTTTTGCCTTGATTTCATCGCTTAATTTGCATACTCGGTTCCGTTTTTTTATTCGCAGGATAGAATATACATAACTGCAGTATCAACGGGATGGCAATGACATTGCAAAATGGTGGTCTTCTTCAGGATGAGAACCTCAATGTTCACTATAATGGTTAGAACTGAAGCTTTCTGTTTGAATAGAAGTTTGGTTTGTTCTTGATCTATTTGGCTGATTTGATTTTAACATTGTAATTTACATCACAGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATTTATCAAACTCAAGAAAGCTAGTCTTGAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGACGAAGAAAATGGTGCAGGAAAAAAGAAAAATATACTGAAAGGTTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCTTGGATATTTCGAACTTCGGAAAGAACGATCACAACAATGCTATCTGTGAGGAGCGCTTCCTGCATAACCATCAAGAATGTATTAAAGCACGAAATTGGCTAGACAAAGATCAATTTCTGAGCATAATTGGACTTGGTATGGTTGTGTCAAGTTTTGATATCTATCTCTAAAAGCCCAATTTTCTTTGACGTTTCTCGAAATTTTTGTTTCATATCTTTTGTTTCTTCTTGTCATTTAGATCACTCTAAAGAGGTGAAGATATCCACTACAAGAAAGGTCAGTTTTGATGTATTATGTCCTCTTAGTTCTATAGTATTTTGGAGGAAAACGTAATAAGCAGTTGGGTTTTTTTGGGTTTCAGCCTGATAGTCCATTGAAGATGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATCAATCTCCAAAGAAGTTTTGTCTATTTGGAAGAGGACTCGAATCACCAACGCCTTGCAAATCGCCAGAATCACCTTCAGTAGATCACTTTTCTGTTTGGAAGGACATCGATATTATTGATTTCACATTGATAAAGACCCCATGAATCGCACCTTGGCCTTTGCTTTCATCTGGAAAGATTGGTAATGGTGGTATTCTGATATGAAGATTGTAGATTCTATGGATGATAGAGGTTGTTAAAACTGGAAATGTTTTGTTTAATGTTTTTGTAGATTTTTTCTGATGCTTAAGGTTGTTTTAAATCAAGAAAGATATTGTAGTTGATGTGTTTTTGTGTTTTGATTGAGATGAAGATTTGTTATCATCTCTTAGTCTTAAGGTTGTTTTTTGAAAAGGCCATTTGGAAAGATTGAA

mRNA sequence

AAAATTTGAAGAAATCGCCCGAAATTCTTTCACTAGAAATTGAAGAAAGTCGAGATCAAGGAATTTGTGACTGATAGAATATACATAACTGCAGTATCAACGGGATGGCAATGACATTGCAAAATGGTGGTCTTCTTCAGGATGAGAACCTCAATGTTCACTATAATGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATTTATCAAACTCAAGAAAGCTAGTCTTGAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGACGAAGAAAATGGTGCAGGAAAAAAGAAAAATATACTGAAAGGTTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCTTGGATATTTCGAACTTCGGAAAGAACGATCACAACAATGCTATCTGTGAGGAGCGCTTCCTGCATAACCATCAAGAATGTATTAAAGCACGAAATTGGCTAGACAAAGATCAATTTCTGAGCATAATTGGACTTGATCACTCTAAAGAGGTGAAGATATCCACTACAAGAAAGCCTGATAGTCCATTGAAGATGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATCAATCTCCAAAGAAGTTTTGTCTATTTGGAAGAGGACTCGAATCACCAACGCCTTGCAAATCGCCAGAATCACCTTCAGTAGATCACTTTTCTGTTTGGAAGGACATCGATATTATTGATTTCACATTGATAAAGACCCCATGAATCGCACCTTGGCCTTTGCTTTCATCTGGAAAGATTGGTAATGGTGGTATTCTGATATGAAGATTGTAGATTCTATGGATGATAGAGGTTGTTAAAACTGGAAATGTTTTGTTTAATGTTTTTGTAGATTTTTTCTGATGCTTAAGGTTGTTTTAAATCAAGAAAGATATTGTAGTTGATGTGTTTTTGTGTTTTGATTGAGATGAAGATTTGTTATCATCTCTTAGTCTTAAGGTTGTTTTTTGAAAAGGCCATTTGGAAAGATTGAA

Coding sequence (CDS)

ATGGCAATGACATTGCAAAATGGTGGTCTTCTTCAGGATGAGAACCTCAATGTTCACTATAATGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATTTATCAAACTCAAGAAAGCTAGTCTTGAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGACGAAGAAAATGGTGCAGGAAAAAAGAAAAATATACTGAAAGGTTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCTTGGATATTTCGAACTTCGGAAAGAACGATCACAACAATGCTATCTGTGAGGAGCGCTTCCTGCATAACCATCAAGAATGTATTAAAGCACGAAATTGGCTAGACAAAGATCAATTTCTGAGCATAATTGGACTTGATCACTCTAAAGAGGTGAAGATATCCACTACAAGAAAGCCTGATAGTCCATTGAAGATGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATCAATCTCCAAAGAAGTTTTGTCTATTTGGAAGAGGACTCGAATCACCAACGCCTTGCAAATCGCCAGAATCACCTTCAGTAGATCACTTTTCTGTTTGGAAGGACATCGATATTATTGATTTCACATTGATAAAGACCCCATGA

Protein sequence

MAMTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSKRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNAICEERFLHNHQECIKARNWLDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEMEEFAGFDQSPKKFCLFGRGLESPTPCKSPESPSVDHFSVWKDIDIIDFTLIKTP

Homology

[Close]

BLAST of ClCG05G008270.1 vs. TrEMBL
Match: A0A0A0L6N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183370 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82
Identity = 166/225 (73.78%), Postives = 180/225 (80.00%), Query Frame = 1


Query: 1   MAMTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQS 60
           MAMT QNGGL+ DENL+VH                      GRKPLGDLSNSRK V+NQS
Sbjct: 1   MAMTFQNGGLVHDENLSVH----------------------GRKPLGDLSNSRKPVINQS 60

Query: 61  SKRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNAICEERFL 120
           SKRQNTKNLTFIDEENGAGK KNI KGSE+VQKGTRKVL DISNFGKN ++N ICEERFL
Sbjct: 61  SKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERFL 120

Query: 121 HNHQECIKARNWLDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEMEEFAGFDQSPKK 180
           HNHQ+CIKA+N LDKDQFLSIIGLDHSKE+KI+TT KPDSPLK LKEMEEFAGFD+SPKK
Sbjct: 121 HNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLK-LKEMEEFAGFDESPKK 180

Query: 181 FCLFG-RGLESPTPCKSPE--SPSVDHFSVWKDIDIIDFTLIKTP 223
             LFG RG ES  PCKSPE  SPS+DHFS W D + IDFTL+KTP
Sbjct: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 202

[Close]

BLAST of ClCG05G008270.1 vs. TrEMBL
Match: A0A061G140_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_015229 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.6e-33
Identity = 103/253 (40.71%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 3   MTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSK 62
           M L+ G L+QD+NLNVHYNG +V G+     + +K G  GRKPLGDLSNS   +  Q+ K
Sbjct: 96  MALRAGRLIQDQNLNVHYNGVSVGGQKKVSKAPKKGGTAGRKPLGDLSNSVNPIQKQAPK 155

Query: 63  RQNTKNLTFIDEEN--------GAGKKKNILKGSERV-QKGTRKVLLDISNFGK------ 122
           ++N    +  D+           A +K ++   SERV Q  +RK L DISN  K      
Sbjct: 156 KENGHGFSIADKGTITTSKIPVDANRKNSVSNASERVLQNDSRKALSDISNSVKPCMRVT 215

Query: 123 -----NDHNNAICEER-FLHNHQECIKA-RNWLDKDQFLSIIGLDH--------SKEVKI 182
                N   + + EE  FLHNHQECIKA +  +  D+FL ++GLD         SK   I
Sbjct: 216 AEKNLNAKRSIVIEEECFLHNHQECIKAQKQAMHMDEFLQMVGLDKDFSRQSTLSKTPPI 275

Query: 183 STTRKPDSPLKMLKEMEEFAGF---DQSPKKFCLFGRGLESPTPCKSPESPSVDHFSVWK 223
           S   KP S LK L+ + E  G    DQSP K  L  + L SP+  ++PE P  +HF  W 
Sbjct: 276 SNKTKPKSSLKSLEPL-EIPGLLIEDQSPLKHNLCSK-LVSPSATRTPEPP--NHFVHWA 335

[Close]

BLAST of ClCG05G008270.1 vs. TrEMBL
Match: A0A061G1M5_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_015229 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.6e-33
Identity = 103/253 (40.71%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 3   MTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSK 62
           M L+ G L+QD+NLNVHYNG +V G+     + +K G  GRKPLGDLSNS   +  Q+ K
Sbjct: 1   MALRAGRLIQDQNLNVHYNGVSVGGQKKVSKAPKKGGTAGRKPLGDLSNSVNPIQKQAPK 60

Query: 63  RQNTKNLTFIDEEN--------GAGKKKNILKGSERV-QKGTRKVLLDISNFGK------ 122
           ++N    +  D+           A +K ++   SERV Q  +RK L DISN  K      
Sbjct: 61  KENGHGFSIADKGTITTSKIPVDANRKNSVSNASERVLQNDSRKALSDISNSVKPCMRVT 120

Query: 123 -----NDHNNAICEER-FLHNHQECIKA-RNWLDKDQFLSIIGLDH--------SKEVKI 182
                N   + + EE  FLHNHQECIKA +  +  D+FL ++GLD         SK   I
Sbjct: 121 AEKNLNAKRSIVIEEECFLHNHQECIKAQKQAMHMDEFLQMVGLDKDFSRQSTLSKTPPI 180

Query: 183 STTRKPDSPLKMLKEMEEFAGF---DQSPKKFCLFGRGLESPTPCKSPESPSVDHFSVWK 223
           S   KP S LK L+ + E  G    DQSP K  L  + L SP+  ++PE P  +HF  W 
Sbjct: 181 SNKTKPKSSLKSLEPL-EIPGLLIEDQSPLKHNLCSK-LVSPSATRTPEPP--NHFVHWA 240

[Close]

BLAST of ClCG05G008270.1 vs. TrEMBL
Match: W9RSI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014249 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.2e-32
Identity = 93/241 (38.59%), Postives = 134/241 (55.60%), Query Frame = 1


Query: 12  QDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSKRQNTKNLTF 71
           QD+N NV Y+G++  GK +   SQ+K GL GRKPLG++SNS  +   Q+SK+QN+KN  F
Sbjct: 10  QDQNFNVQYSGASAGGKMHTNKSQKKGGLGGRKPLGEISNSTNIAPTQASKKQNSKNFGF 69

Query: 72  IDE-ENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNA----------------- 131
           I E       +K+I K S++VQ  +RK L DISN GK   + A                 
Sbjct: 70  IKEVTREESNRKSIAKTSDKVQTRSRKALSDISNSGKAHLHEASKNNLSLKLSAVEEEHL 129

Query: 132 ----ICEERFLHNHQECIKARNW-LDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEM 191
               I EE+FLH+HQECIKA+   +D +QFL  IGL +    ++ + R P  P+K+ K M
Sbjct: 130 FPSCIAEEQFLHDHQECIKAKTKPMDVEQFLVSIGLTNGSSQQVESPRVP--PVKLSKMM 189

Query: 192 EEFAGFDQSPKKFC-------LFGRGLESPTPCKSPESPSVDHFSVWKDIDIIDFTLIKT 223
            +       P++         L+   + SPT C+SP+SP +   + WKD D I+F L+ +
Sbjct: 190 PQNPLSTLEPEEITEHLIEDDLWKMKMNSPT-CRSPKSP-IYSSAFWKDCDSINFKLMDS 246

[Close]

BLAST of ClCG05G008270.1 vs. TrEMBL
Match: W9RS62_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014248 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.5e-32
Identity = 93/241 (38.59%), Postives = 135/241 (56.02%), Query Frame = 1


Query: 12  QDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSKRQNTKNLTF 71
           QD+N NV Y+G++  GK +A  SQ+K GL GRKPLG++SNS  +   Q+SK+QN+KN  F
Sbjct: 10  QDQNFNVQYSGASAGGKMHANKSQKKVGLGGRKPLGEISNSTNIAPTQASKKQNSKNFGF 69

Query: 72  IDE-ENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNA----------------- 131
           I E       +K+I K S+++Q  +RK L DISN GK   + A                 
Sbjct: 70  IKEVTREESNRKSIAKTSDKMQTRSRKALSDISNSGKAHLHEASKNNLSLKLSAVEEEHL 129

Query: 132 ----ICEERFLHNHQECIKARNW-LDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEM 191
               I EE+FLH+HQECIKA+   +D +QFL  IGL +    ++ + R P  P+K+ K M
Sbjct: 130 FPSCIAEEQFLHDHQECIKAKTKPMDVEQFLVSIGLTNGSSQQVESPRVP--PVKLSKMM 189

Query: 192 EEFAGFDQSPKKFC-------LFGRGLESPTPCKSPESPSVDHFSVWKDIDIIDFTLIKT 223
            +       P++         L+   + SPT C+SP+SP +   + WKD D I+F L+ +
Sbjct: 190 PQNPLSTLEPEEITEHLIEDDLWKMKMNSPT-CRSPKSP-IYSSAFWKDCDSINFKLMDS 246

[Close]

BLAST of ClCG05G008270.1 vs. NCBI nr
Match: gi|449446009|ref|XP_004140764.1| (PREDICTED: uncharacterized protein LOC101213514 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 2.5e-94
Identity = 183/226 (80.97%), Postives = 199/226 (88.05%), Query Frame = 1


Query: 1   MAMTLQNGGLLQDENLNVHYN-GSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQ 60
           MAMT QNGGL+ DENL+V Y  GSAV GKANAMNSQRK+GL+GRKPLGDLSNSRK V+NQ
Sbjct: 1   MAMTFQNGGLVHDENLSVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNAICEERF 120
           SSKRQNTKNLTFIDEENGAGK KNI KGSE+VQKGTRKVL DISNFGKN ++N ICEERF
Sbjct: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQECIKARNWLDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEMEEFAGFDQSPK 180
           LHNHQ+CIKA+N LDKDQFLSIIGLDHSKE+KI+TT KPDSPLK LKEMEEFAGFD+SPK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLK-LKEMEEFAGFDESPK 180

Query: 181 KFCLFG-RGLESPTPCKSPE--SPSVDHFSVWKDIDIIDFTLIKTP 223
           K  LFG RG ES  PCKSPE  SPS+DHFS W D + IDFTL+KTP
Sbjct: 181 KLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 225

[Close]

BLAST of ClCG05G008270.1 vs. NCBI nr
Match: gi|659110390|ref|XP_008455201.1| (PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 3.6e-93
Identity = 181/227 (79.74%), Postives = 199/227 (87.67%), Query Frame = 1


Query: 1   MAMTLQNGGLLQDENLNVHYN-GSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQ 60
           MAMT QNGGL+ DENLNV Y  GSAVAGKANAMNSQRK+GL+GRKPLGDLSNSRK V+NQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNAICEERF 120
           SSKRQ TKNLTFIDEENGAGK KNI KGSE+VQKGTRKVL DISNFGKN ++N ICEERF
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQECIKARNWLDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEMEEFAGFDQSPK 180
           LHNHQ+CIKA+N LDKDQFLSIIGLDHSKE+KISTT+KPDSPLK L+EM+EFAGFD+SPK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKISTTKKPDSPLK-LEEMDEFAGFDESPK 180

Query: 181 KFCLFG-RGLESPTPCKSPE---SPSVDHFSVWKDIDIIDFTLIKTP 223
           K  LFG RG E  +PCKSPE   SPS+DHFS   D + I+FTLIKTP
Sbjct: 181 KLFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEFTLIKTP 226

[Close]

BLAST of ClCG05G008270.1 vs. NCBI nr
Match: gi|700202270|gb|KGN57403.1| (hypothetical protein Csa_3G183370 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 3.8e-82
Identity = 166/225 (73.78%), Postives = 180/225 (80.00%), Query Frame = 1


Query: 1   MAMTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQS 60
           MAMT QNGGL+ DENL+VH                      GRKPLGDLSNSRK V+NQS
Sbjct: 1   MAMTFQNGGLVHDENLSVH----------------------GRKPLGDLSNSRKPVINQS 60

Query: 61  SKRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKNDHNNAICEERFL 120
           SKRQNTKNLTFIDEENGAGK KNI KGSE+VQKGTRKVL DISNFGKN ++N ICEERFL
Sbjct: 61  SKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERFL 120

Query: 121 HNHQECIKARNWLDKDQFLSIIGLDHSKEVKISTTRKPDSPLKMLKEMEEFAGFDQSPKK 180
           HNHQ+CIKA+N LDKDQFLSIIGLDHSKE+KI+TT KPDSPLK LKEMEEFAGFD+SPKK
Sbjct: 121 HNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLK-LKEMEEFAGFDESPKK 180

Query: 181 FCLFG-RGLESPTPCKSPE--SPSVDHFSVWKDIDIIDFTLIKTP 223
             LFG RG ES  PCKSPE  SPS+DHFS W D + IDFTL+KTP
Sbjct: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 202

[Close]

BLAST of ClCG05G008270.1 vs. NCBI nr
Match: gi|1009109164|ref|XP_015888669.1| (PREDICTED: uncharacterized protein LOC107423596 [Ziziphus jujuba])

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35
Identity = 104/254 (40.94%), Postives = 137/254 (53.94%), Query Frame = 1


Query: 3   MTLQNGGLLQDENLNVHYNGSAVAGKAN-AMNSQRKSGLNGRKPLGDLSNSRKLVLNQSS 62
           M  + G L+ D+NL++ YNG++  GKAN  + SQ+K GL GRKPLGDLSNS K    Q S
Sbjct: 1   MASKIGRLIPDQNLSIRYNGASAGGKANNVVKSQKKGGLGGRKPLGDLSNSGKPAPTQPS 60

Query: 63  KRQNTKNLTFIDEENGAGKKKNILKGSERVQKGTRKVLLDISNFGKND------------ 122
           K+ N KN  FI+    +  KKN  K  ++VQ G+RK L DISN GK +            
Sbjct: 61  KKANPKNFAFIEAIQDSSIKKNSFKAFDKVQTGSRKALSDISNSGKPNLQEESKKKQNLK 120

Query: 123 ----------HNNAICEERFLHNHQECIKARNW-LDKDQFLSIIGLDHSKEVKISTTRKP 182
                      N  I EE FLHNHQECIKA+   +D DQFL+ +GL  SK+   S    P
Sbjct: 121 LGVVEEDFVCPNGGILEEGFLHNHQECIKAQTMTMDVDQFLNTLGLVSSKQF-ASPRAIP 180

Query: 183 DSPLKM----------LKEMEEFAGFDQSPKKFCLFGRGLESPTPCKSPESPSVDHFSVW 223
            +  KM          L+EM+E    D    K+C    G ES  PCK+P+S +    S+W
Sbjct: 181 TASSKMEIEKSMWHLELEEMDE----DMIEDKYC----GKESSPPCKTPKSSNCS--SLW 240

[Close]

BLAST of ClCG05G008270.1 vs. NCBI nr
Match: gi|590673056|ref|XP_007038782.1| (Uncharacterized protein isoform 3 [Theobroma cacao])

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 103/253 (40.71%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 3   MTLQNGGLLQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKLVLNQSSK 62
           M L+ G L+QD+NLNVHYNG +V G+     + +K G  GRKPLGDLSNS   +  Q+ K
Sbjct: 1   MALRAGRLIQDQNLNVHYNGVSVGGQKKVSKAPKKGGTAGRKPLGDLSNSVNPIQKQAPK 60

Query: 63  RQNTKNLTFIDEEN--------GAGKKKNILKGSERV-QKGTRKVLLDISNFGK------ 122
           ++N    +  D+           A +K ++   SERV Q  +RK L DISN  K      
Sbjct: 61  KENGHGFSIADKGTITTSKIPVDANRKNSVSNASERVLQNDSRKALSDISNSVKPCMRVT 120

Query: 123 -----NDHNNAICEER-FLHNHQECIKA-RNWLDKDQFLSIIGLDH--------SKEVKI 182
                N   + + EE  FLHNHQECIKA +  +  D+FL ++GLD         SK   I
Sbjct: 121 AEKNLNAKRSIVIEEECFLHNHQECIKAQKQAMHMDEFLQMVGLDKDFSRQSTLSKTPPI 180

Query: 183 STTRKPDSPLKMLKEMEEFAGF---DQSPKKFCLFGRGLESPTPCKSPESPSVDHFSVWK 223
           S   KP S LK L+ + E  G    DQSP K  L  + L SP+  ++PE P  +HF  W 
Sbjct: 181 SNKTKPKSSLKSLEPL-EIPGLLIEDQSPLKHNLCSK-LVSPSATRTPEPP--NHFVHWA 240

The following BLAST results are available for this feature:

BLAST of ClCG05G008270.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6N1_CUCSA	2.6e-82	73.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183370 PE=4 SV=1	[more]
A0A061G140_THECC	8.6e-33	40.71	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_015229 PE=4 SV=1	[more]
A0A061G1M5_THECC	8.6e-33	40.71	Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_015229 PE=4 SV=1	[more]
W9RSI9_9ROSA	7.2e-32	38.59	Uncharacterized protein OS=Morus notabilis GN=L484_014249 PE=4 SV=1	[more]
W9RS62_9ROSA	9.5e-32	38.59	Uncharacterized protein OS=Morus notabilis GN=L484_014248 PE=4 SV=1	[more]

BLAST of ClCG05G008270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446009\|ref\|XP_004140764.1\|	2.5e-94	80.97	PREDICTED: uncharacterized protein LOC101213514 [Cucumis sativus]	[more]
gi\|659110390\|ref\|XP_008455201.1\|	3.6e-93	79.74	PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo]	[more]
gi\|700202270\|gb\|KGN57403.1\|	3.8e-82	73.78	hypothetical protein Csa_3G183370 [Cucumis sativus]	[more]
gi\|1009109164\|ref\|XP_015888669.1\|	3.5e-35	40.94	PREDICTED: uncharacterized protein LOC107423596 [Ziziphus jujuba]	[more]
gi\|590673056\|ref\|XP_007038782.1\|	1.2e-32	40.71	Uncharacterized protein isoform 3 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G008270	ClCG05G008270	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G008270.1	ClCG05G008270.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008270.1.five_prime_UTR1	ClCG05G008270.1.five_prime_UTR1	five_prime_UTR
ClCG05G008270.1.five_prime_UTR2	ClCG05G008270.1.five_prime_UTR2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008270.1.cds1	ClCG05G008270.1.cds1	CDS
ClCG05G008270.1.cds2	ClCG05G008270.1.cds2	CDS
ClCG05G008270.1.cds3	ClCG05G008270.1.cds3	CDS
ClCG05G008270.1.cds4	ClCG05G008270.1.cds4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G008270.1.three_prime_UTR1	ClCG05G008270.1.three_prime_UTR1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35125	FAMILY NOT NAMED	coord: 1..222 score: 2.2
None	No IPR available	PANTHER	PTHR35125:SF2	SUBFAMILY NOT NAMED	coord: 1..222 score: 2.2