ClCG05G004130.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G004130.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Peptide transporter PTR3-A
Location	CG_Chr05 : 3801573 .. 3802536 (-)
Sequence length	693

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGCAGTGTCCATGCCAAGCCTGAAGCTCCCTCCATGTTTGGAAGCAAATACAGAACATTGCAAGCAGACCTCCAGGCTACAGCTTGCTGTCTTCTTCACCGCACTCTACAAATATGGAGGCCATTGTCCTAGTAGTTATGTTTGAAAATATGAAGACCAATTTGTAGGAATCAGAATAGTTCTATTTAGTTTGAACTTGGTTCTGAACTTCTGAAGTGTTTATGGATGTAGAACATCTTGGGGTTACTGAATTGGCATAGGTACAATATATGGGGTTCAATGAGATTGTATTTTTTTTTTTTTTTTTTTATTGCATATGCAGGTTCCTCAACAAGGCTGCCATCAGAACAGGCTCAACTCATCCATGGAAGCTATGCTCAGTGACCCAAGTGGAGGAGACAAAGCAGATGTTGAGAATGATCCCAATTCTGATATGCACATTCATTCCAAGCACAATGTTGTCACAACCACAGACCCTTTTCATCAAGCAGGGCAGGAGCCTCAACCGAAGCTCCCTCTAACCATTTTCACTCTCCTCCCTCAGTTCATGCTTGTGGGAGTTGCCGATGCATTTTCAGAAGTAGCAAAGGTTGAATTCTTTTATGATCAAGCACCAGAAAGCATGAAGAGTTTAGGGACTTCGCATTCGATGACTTCGCTCGGAATTGGAAACTTCCTAAGTAGTTTTCTTCTTTCAACAGTTTCTAACATTACAAAGAAACAACCTGAATGCTTCTCATCTTGATTACTACTATGCGTTTTTGGCAGTGCTTAGTACCATCAACTTCTTCCTCTTCTTGCACATGTCCAAAATGTATGCGTACAGAGCAGAAGTATCTGATTCAATAAAAGTGCTTACTGATAAACTCAAGGCATCCAACCTAAACCCAAAATCAGCTATGACGAGGGGCAGAGCCGATGAAGGAAGGGCGCACTTGCCACCCTTCAATTTGTTCTAG

mRNA sequence

ATGCTGGCAGTGTCCATGCCAAGCCTGAAGCTCCCTCCATGTTTGGAAGCAAATACAGAACATTGCAAGCAGACCTCCAGGCTACAGCTTGCTGTCTTCTTCACCGCACTCTACAAATATGGAGGCCATTGTCCTAGTAGTTATGTTCCTCAACAAGGCTGCCATCAGAACAGGCTCAACTCATCCATGGAAGCTATGCTCAGTGACCCAAGTGGAGGAGACAAAGCAGATGTTGAGAATGATCCCAATTCTGATATGCACATTCATTCCAAGCACAATGTTGTCACAACCACAGACCCTTTTCATCAAGCAGGGCAGGAGCCTCAACCGAAGCTCCCTCTAACCATTTTCACTCTCCTCCCTCAGTTCATGCTTGTGGGAGTTGCCGATGCATTTTCAGAAGTAGCAAAGGTTGAATTCTTTTATGATCAAGCACCAGAAAGCATGAAGAGTTTAGGGACTTCGCATTCGATGACTTCGCTCGGAATTGGAAACTTCCTAATGCTTAGTACCATCAACTTCTTCCTCTTCTTGCACATGTCCAAAATGTATGCGTACAGAGCAGAAGTATCTGATTCAATAAAAGTGCTTACTGATAAACTCAAGGCATCCAACCTAAACCCAAAATCAGCTATGACGAGGGGCAGAGCCGATGAAGGAAGGGCGCACTTGCCACCCTTCAATTTGTTCTAG

Coding sequence (CDS)

ATGCTGGCAGTGTCCATGCCAAGCCTGAAGCTCCCTCCATGTTTGGAAGCAAATACAGAACATTGCAAGCAGACCTCCAGGCTACAGCTTGCTGTCTTCTTCACCGCACTCTACAAATATGGAGGCCATTGTCCTAGTAGTTATGTTCCTCAACAAGGCTGCCATCAGAACAGGCTCAACTCATCCATGGAAGCTATGCTCAGTGACCCAAGTGGAGGAGACAAAGCAGATGTTGAGAATGATCCCAATTCTGATATGCACATTCATTCCAAGCACAATGTTGTCACAACCACAGACCCTTTTCATCAAGCAGGGCAGGAGCCTCAACCGAAGCTCCCTCTAACCATTTTCACTCTCCTCCCTCAGTTCATGCTTGTGGGAGTTGCCGATGCATTTTCAGAAGTAGCAAAGGTTGAATTCTTTTATGATCAAGCACCAGAAAGCATGAAGAGTTTAGGGACTTCGCATTCGATGACTTCGCTCGGAATTGGAAACTTCCTAATGCTTAGTACCATCAACTTCTTCCTCTTCTTGCACATGTCCAAAATGTATGCGTACAGAGCAGAAGTATCTGATTCAATAAAAGTGCTTACTGATAAACTCAAGGCATCCAACCTAAACCCAAAATCAGCTATGACGAGGGGCAGAGCCGATGAAGGAAGGGCGCACTTGCCACCCTTCAATTTGTTCTAG

Protein sequence

MLAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALYKYGGHCPSSYVPQQGCHQNRLNSSMEAMLSDPSGGDKADVENDPNSDMHIHSKHNVVTTTDPFHQAGQEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFLMLSTINFFLFLHMSKMYAYRAEVSDSIKVLTDKLKASNLNPKSAMTRGRADEGRAHLPPFNLF

Homology

[Close]

BLAST of ClCG05G004130.1 vs. Swiss-Prot
Match: PTR3_ARATH (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20
Identity = 64/138 (46.38%), Postives = 77/138 (55.80%), Query Frame = 1


Query: 102 HQAGQEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSL 161
           HQ G     KLPLTIF LLPQF+L+G+AD+F EVAK+EFFYDQAPESMKSLGTS+S TSL
Sbjct: 446 HQTGV----KLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSL 505

Query: 162 GIGNFL---MLSTINFFLF----------------------------------LHMSKMY 203
            IGNF+   +LST++                                      L + K Y
Sbjct: 506 AIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFY 565

HSP 2 Score: 44.7 bits (104), Expect = 1.6e-03
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+V++P +K P C   N E+C++ S LQLAVFF ALY
Sbjct: 118 LSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALY 154

[Close]

BLAST of ClCG05G004130.1 vs. Swiss-Prot
Match: PTR4_ARATH (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 1


Query: 112 LPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF---LM 171
           +PL+IFTLLPQ++L+G+ADAF E+AK+EFFYDQAPESMKSLGTS++ TS+ +G F   ++
Sbjct: 452 IPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSIL 511

Query: 172 LSTI----------------------NFF------------LFLHMSKMYAYRAEVSDSI 197
           LS++                      N++            LFL + + Y YRA+V+ S 
Sbjct: 512 LSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYRADVTQSA 571

HSP 2 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+P LK P C  AN E+C++ S +QLAVFF ALY
Sbjct: 118 LSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALY 154

[Close]

BLAST of ClCG05G004130.1 vs. Swiss-Prot
Match: PTR30_ARATH (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.3e-12
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 108 PQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL 167
           P   +P++IF LLPQ+ L+G+ D F+ +  +EFFYDQ+PE M+SLGT+   + +G+GNFL
Sbjct: 438 PTQVVPMSIFWLLPQYSLLGIGDVFNAIGLLEFFYDQSPEEMQSLGTTFFTSGIGLGNFL 497

Query: 168 MLSTINFFLFLHMSKM 184
                N FL   + K+
Sbjct: 498 -----NSFLVTMIDKI 508

[Close]

BLAST of ClCG05G004130.1 vs. Swiss-Prot
Match: PTR11_ARATH (Protein NRT1/ PTR FAMILY 5.15 OS=Arabidopsis thaliana GN=NPF5.15 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.2e-10
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 1


Query: 102 HQAGQEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSL 161
           H    +P   +P++I+  +PQ++L+G+ D FS V   EFFYDQ P  ++S+G S S++++
Sbjct: 440 HGLVDKPDVTVPMSIWWFVPQYLLLGMIDLFSMVGTQEFFYDQVPTELRSIGLSLSLSAM 499

Query: 162 GIGNFL-----------------------------------MLSTINFFLFLHMSKMYAY 188
           G+ +FL                                     + I FF FL +SKMY Y
Sbjct: 500 GLSSFLSGFLISLIDWATGKDGWFNSNLNRAHVDYFYWLLAAFTAIAFFAFLFISKMYVY 559

[Close]

BLAST of ClCG05G004130.1 vs. Swiss-Prot
Match: PTR5_ARATH (Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.8e-10
Identity = 27/56 (48.21%), Postives = 43/56 (76.79%), Query Frame = 1


Query: 112 LPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL 168
           +P+TIF  +PQ+ LVG A+ F+ + ++EFFYDQAP++M+SL ++ S+T++  GN+L
Sbjct: 450 IPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYL 505

[Close]

BLAST of ClCG05G004130.1 vs. TrEMBL
Match: A0A0A0L4B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134780 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.1e-38
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 106 QEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGN 165
           ++ + +L LTIFTLLPQFMLVGVADAFSEVAK+EFFYDQAPE+MKSLGTS+SMTSLGIGN
Sbjct: 483 EKNEEQLSLTIFTLLPQFMLVGVADAFSEVAKIEFFYDQAPENMKSLGTSYSMTSLGIGN 542

Query: 166 FL---MLSTINFFLFLHMSK--------------------------------------MY 225
           FL   +LST++     H +                                       MY
Sbjct: 543 FLSSFLLSTVSHITKKHGNGNGNGWIENNLNVSHLDYYYAFLAVLCAINFFFFLVMSKMY 602

Query: 226 AYRAEVSDSIKVLTDKLKASNLNPKSAMTRGRADEGRAHLPPFNL 230
            Y+AEVSDSIKVL+DKLKASN+N K AM RGRADEGR HLPPFNL
Sbjct: 603 EYKAEVSDSIKVLSDKLKASNINEKPAMMRGRADEGRGHLPPFNL 647

[Close]

BLAST of ClCG05G004130.1 vs. TrEMBL
Match: A0A0A0L4B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134780 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           LAVSMPSLK PPCL+ N E+CKQ SRL LA+FFTALY
Sbjct: 156 LAVSMPSLKPPPCLDTNKENCKQASRLHLAIFFTALY 192

HSP 2 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 111 KLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL--- 170
           +LPLTIF LLPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+S TSLGIGNFL   
Sbjct: 449 QLPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSSTSLGIGNFLSSF 508

Query: 171 MLSTIN---------FFLFLHMSKMYAYRAEVSDSIKVLTDKLKASNL 207
           +LST++          ++  +++K Y Y+AEVS+S+ VLT++LK   L
Sbjct: 509 LLSTVSDITQGDGHQGWILNNLNKFYVYKAEVSESMHVLTEELKVMRL 556

[Close]

BLAST of ClCG05G004130.1 vs. TrEMBL
Match: A0A0D2PMW3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G052500 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-03
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+P LK PPC +AN + CK+ S LQLA FF ALY
Sbjct: 118 LSVSIPGLKPPPCHQANIDDCKKASTLQLATFFGALY 154

HSP 2 Score: 119.8 bits (299), Expect = 4.4e-24
Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1


Query: 107 EPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF 166
           E   ++PLTIF +LPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+SMT+LG+GNF
Sbjct: 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506

Query: 167 L---MLSTI-----------------------------------NFFLFLHMSKMYAYRA 207
           L   +LST+                                   NF  FL ++K Y Y+A
Sbjct: 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566

[Close]

BLAST of ClCG05G004130.1 vs. TrEMBL
Match: V4TB20_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003924mg PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 1.8e-01
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+  LK PPC + N++ C++ S LQL  FF ALY
Sbjct: 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFVALY 155

HSP 2 Score: 118.6 bits (296), Expect = 9.8e-24
Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 107 EPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF 166
           E   ++PLTIF +LPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+SMT+LG+GNF
Sbjct: 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506

Query: 167 L---MLSTI-----------------------------------NFFLFLHMSKMYAYRA 203
           L   +LST+                                   NF  FL ++K Y Y+A
Sbjct: 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566

[Close]

BLAST of ClCG05G004130.1 vs. TrEMBL
Match: A0A067H269_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007604mg PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 1.8e-01
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+  LK PPC + N++ C++ S LQL  FF ALY
Sbjct: 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALY 155

HSP 2 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 70/128 (54.69%), Postives = 80/128 (62.50%), Query Frame = 1


Query: 112 LPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL---M 171
           LPLTIFTLLPQFML+G ADAF EVAK+EFFYDQAPE+MKSLGTS SMTSLGIGNFL   +
Sbjct: 449 LPLTIFTLLPQFMLMGTADAFMEVAKIEFFYDQAPETMKSLGTSFSMTSLGIGNFLSTFL 508

Query: 172 LSTINFFLF----------------------------------LHMSKMYAYRAEVSDSI 203
           LST++                                      L +SK+Y Y+AEVS SI
Sbjct: 509 LSTVSHITIKNGNGWILNNLNSSHLDYYYALIAVLSTINFFVFLIISKLYVYKAEVSTSI 568

[Close]

BLAST of ClCG05G004130.1 vs. TAIR10
Match: AT5G46050.1 (AT5G46050.1 peptide transporter 3)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 64/138 (46.38%), Postives = 77/138 (55.80%), Query Frame = 1


Query: 102 HQAGQEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSL 161
           HQ G     KLPLTIF LLPQF+L+G+AD+F EVAK+EFFYDQAPESMKSLGTS+S TSL
Sbjct: 446 HQTGV----KLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSL 505

Query: 162 GIGNFL---MLSTINFFLF----------------------------------LHMSKMY 203
            IGNF+   +LST++                                      L + K Y
Sbjct: 506 AIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFY 565

HSP 2 Score: 44.7 bits (104), Expect = 9.1e-05
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+V++P +K P C   N E+C++ S LQLAVFF ALY
Sbjct: 118 LSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALY 154

[Close]

BLAST of ClCG05G004130.1 vs. TAIR10
Match: AT5G46040.1 (AT5G46040.1 Major facilitator superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 1


Query: 112 LPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF---LM 171
           +PL+IFTLLPQ++L+G+ADAF E+AK+EFFYDQAPESMKSLGTS++ TS+ +G F   ++
Sbjct: 452 IPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSIL 511

Query: 172 LSTI----------------------NFF------------LFLHMSKMYAYRAEVSDSI 197
           LS++                      N++            LFL + + Y YRA+V+ S 
Sbjct: 512 LSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYRADVTQSA 571

HSP 2 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+P LK P C  AN E+C++ S +QLAVFF ALY
Sbjct: 118 LSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALY 154

[Close]

BLAST of ClCG05G004130.1 vs. TAIR10
Match: AT2G40460.1 (AT2G40460.1 Major facilitator superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-13
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 108 PQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL 167
           P   +P++IF LLPQ+ L+G+ D F+ +  +EFFYDQ+PE M+SLGT+   + +G+GNFL
Sbjct: 438 PTQVVPMSIFWLLPQYSLLGIGDVFNAIGLLEFFYDQSPEEMQSLGTTFFTSGIGLGNFL 497

Query: 168 MLSTINFFLFLHMSKM 184
                N FL   + K+
Sbjct: 498 -----NSFLVTMIDKI 508

[Close]

BLAST of ClCG05G004130.1 vs. TAIR10
Match: AT1G22570.1 (AT1G22570.1 Major facilitator superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 1


Query: 102 HQAGQEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSL 161
           H    +P   +P++I+  +PQ++L+G+ D FS V   EFFYDQ P  ++S+G S S++++
Sbjct: 440 HGLVDKPDVTVPMSIWWFVPQYLLLGMIDLFSMVGTQEFFYDQVPTELRSIGLSLSLSAM 499

Query: 162 GIGNFL-----------------------------------MLSTINFFLFLHMSKMYAY 188
           G+ +FL                                     + I FF FL +SKMY Y
Sbjct: 500 GLSSFLSGFLISLIDWATGKDGWFNSNLNRAHVDYFYWLLAAFTAIAFFAFLFISKMYVY 559

[Close]

BLAST of ClCG05G004130.1 vs. TAIR10
Match: AT5G01180.1 (AT5G01180.1 peptide transporter 5)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 27/56 (48.21%), Postives = 43/56 (76.79%), Query Frame = 1


Query: 112 LPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL 168
           +P+TIF  +PQ+ LVG A+ F+ + ++EFFYDQAP++M+SL ++ S+T++  GN+L
Sbjct: 450 IPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYL 505

[Close]

BLAST of ClCG05G004130.1 vs. NCBI nr
Match: gi|449433237|ref|XP_004134404.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 106 QEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGN 165
           ++ + +L LTIFTLLPQFMLVGVADAFSEVAK+EFFYDQAPE+MKSLGTS+SMTSLGIGN
Sbjct: 458 EKNEEQLSLTIFTLLPQFMLVGVADAFSEVAKIEFFYDQAPENMKSLGTSYSMTSLGIGN 517

Query: 166 FL---MLSTINFFLFLHMSK--------------------------------------MY 225
           FL   +LST++     H +                                       MY
Sbjct: 518 FLSSFLLSTVSHITKKHGNGNGNGWIENNLNVSHLDYYYAFLAVLCAINFFFFLVMSKMY 577

Query: 226 AYRAEVSDSIKVLTDKLKASNLNPKSAMTRGRADEGRAHLPPFNL 230
            Y+AEVSDSIKVL+DKLKASN+N K AM RGRADEGR HLPPFNL
Sbjct: 578 EYKAEVSDSIKVLSDKLKASNINEKPAMMRGRADEGRGHLPPFNL 622

[Close]

BLAST of ClCG05G004130.1 vs. NCBI nr
Match: gi|449433237|ref|XP_004134404.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-07
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           LAVSMPSLK PPCL+ N E+CKQ SRL LA+FFTALY
Sbjct: 131 LAVSMPSLKPPPCLDTNKENCKQASRLHLAIFFTALY 167

HSP 2 Score: 166.4 bits (420), Expect = 5.9e-38
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 106 QEPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGN 165
           ++ + +L LTIFTLLPQFMLVGVADAFSEVAK+EFFYDQAPE+MKSLGTS+SMTSLGIGN
Sbjct: 483 EKNEEQLSLTIFTLLPQFMLVGVADAFSEVAKIEFFYDQAPENMKSLGTSYSMTSLGIGN 542

Query: 166 FL---MLSTINFFLFLHMSK--------------------------------------MY 225
           FL   +LST++     H +                                       MY
Sbjct: 543 FLSSFLLSTVSHITKKHGNGNGNGWIENNLNVSHLDYYYAFLAVLCAINFFFFLVMSKMY 602

Query: 226 AYRAEVSDSIKVLTDKLKASNLNPKSAMTRGRADEGRAHLPPFNL 230
            Y+AEVSDSIKVL+DKLKASN+N K AM RGRADEGR HLPPFNL
Sbjct: 603 EYKAEVSDSIKVLSDKLKASNINEKPAMMRGRADEGRGHLPPFNL 647

[Close]

BLAST of ClCG05G004130.1 vs. NCBI nr
Match: gi|700201697|gb|KGN56830.1| (hypothetical protein Csa_3G134780 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-07
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           LAVSMPSLK PPCL+ N E+CKQ SRL LA+FFTALY
Sbjct: 156 LAVSMPSLKPPPCLDTNKENCKQASRLHLAIFFTALY 192

HSP 2 Score: 120.6 bits (301), Expect = 3.7e-24
Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 111 KLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNFL--- 170
           +LPLTIF LLPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+S TSLGIGNFL   
Sbjct: 449 QLPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSSTSLGIGNFLSSF 508

Query: 171 MLSTIN---------FFLFLHMSKMYAYRAEVSDSIKVLTDKLKASNL 207
           +LST++          ++  +++K Y Y+AEVS+S+ VLT++LK   L
Sbjct: 509 LLSTVSDITQGDGHQGWILNNLNKFYVYKAEVSESMHVLTEELKVMRL 556

[Close]

BLAST of ClCG05G004130.1 vs. NCBI nr
Match: gi|763761229|gb|KJB28483.1| (hypothetical protein B456_005G052500 [Gossypium raimondii])

HSP 1 Score: 50.4 bits (119), Expect = 4.7e-03
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+P LK PPC +AN + CK+ S LQLA FF ALY
Sbjct: 118 LSVSIPGLKPPPCHQANIDDCKKASTLQLATFFGALY 154

HSP 2 Score: 119.8 bits (299), Expect = 6.3e-24
Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1


Query: 107 EPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF 166
           E   ++PLTIF +LPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+SMT+LG+GNF
Sbjct: 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506

Query: 167 L---MLSTI-----------------------------------NFFLFLHMSKMYAYRA 207
           L   +LST+                                   NF  FL ++K Y Y+A
Sbjct: 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566

[Close]

BLAST of ClCG05G004130.1 vs. NCBI nr
Match: gi|567881985|ref|XP_006433551.1| (hypothetical protein CICLE_v10003924mg [Citrus clementina])

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-01
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 2   LAVSMPSLKLPPCLEANTEHCKQTSRLQLAVFFTALY 39
           L+VS+  LK PPC + N++ C++ S LQL  FF ALY
Sbjct: 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFVALY 155

HSP 2 Score: 118.6 bits (296), Expect = 1.4e-23
Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 107 EPQPKLPLTIFTLLPQFMLVGVADAFSEVAKVEFFYDQAPESMKSLGTSHSMTSLGIGNF 166
           E   ++PLTIF +LPQF+L+G ADAF EVAK+EFFYDQAPESMKSLGTS+SMT+LG+GNF
Sbjct: 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506

Query: 167 L---MLSTI-----------------------------------NFFLFLHMSKMYAYRA 203
           L   +LST+                                   NF  FL ++K Y Y+A
Sbjct: 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566

The following BLAST results are available for this feature:

BLAST of ClCG05G004130.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTR3_ARATH	2.5e-20	46.38	Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana GN=NPF5.2 PE=2 SV=1	[more]
PTR4_ARATH	4.4e-17	42.62	Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana GN=NPF5.3 PE=2 SV=1	[more]
PTR30_ARATH	7.3e-12	44.74	Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2	[more]
PTR11_ARATH	5.2e-10	30.58	Protein NRT1/ PTR FAMILY 5.15 OS=Arabidopsis thaliana GN=NPF5.15 PE=2 SV=1	[more]
PTR5_ARATH	6.8e-10	48.21	Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1	[more]

BLAST of ClCG05G004130.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4B7_CUCSA	4.1e-38	57.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134780 PE=4 SV=1	[more]
A0A0A0L4B7_CUCSA	3.8e-07	78.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134780 PE=4 SV=1	[more]
A0A0D2PMW3_GOSRA	3.3e-03	62.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G052500 PE=4 SV=1	[more]
V4TB20_9ROSI	1.8e-01	51.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003924mg PE=4 SV=1	[more]
A0A067H269_CITSI	1.8e-01	51.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007604mg PE=4 SV=1	[more]

BLAST of ClCG05G004130.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G46050.1	1.4e-21	46.38	peptide transporter 3	[more]
AT5G46040.1	2.5e-18	42.62	Major facilitator superfamily protein	[more]
AT2G40460.1	4.1e-13	44.74	Major facilitator superfamily protein	[more]
AT1G22570.1	2.9e-11	30.58	Major facilitator superfamily protein	[more]
AT5G01180.1	3.8e-11	48.21	peptide transporter 5	[more]

BLAST of ClCG05G004130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433237\|ref\|XP_004134404.1\|	5.9e-38	57.58	PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus]	[more]
gi\|449433237\|ref\|XP_004134404.1\|	5.4e-07	78.38	PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus]	[more]
gi\|700201697\|gb\|KGN56830.1\|	5.4e-07	78.38	hypothetical protein Csa_3G134780 [Cucumis sativus]	[more]
gi\|763761229\|gb\|KJB28483.1\|	4.7e-03	62.16	hypothetical protein B456_005G052500 [Gossypium raimondii]	[more]
gi\|567881985\|ref\|XP_006433551.1\|	2.6e-01	51.35	hypothetical protein CICLE_v10003924mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000109	POT_fam

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G004130	ClCG05G004130	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G004130.1	ClCG05G004130.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G004130.1.cds3	ClCG05G004130.1.cds3	CDS
ClCG05G004130.1.cds2	ClCG05G004130.1.cds2	CDS
ClCG05G004130.1.cds1	ClCG05G004130.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000109	Proton-dependent oligopeptide transporter family	PANTHER	PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	coord: 111..213 score: 9.1
IPR000109	Proton-dependent oligopeptide transporter family	PFAM	PF00854	PTR2	coord: 107..170 score: 1.
None	No IPR available	PANTHER	PTHR11654:SF73	PROTEIN NRT1/ PTR FAMILY 5.2-RELATED	coord: 111..213 score: 9.1