ClCG05G003630.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G003630.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Self-incompatibility family protein
Location	CG_Chr05 : 3443595 .. 3451777 (+)
Sequence length	594

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGGGAGTGAACTTGAGAGATCTAATCGGTGTCGGTGCCCCCGCGAGGCAGAAACCTCGTTTAGGAAGGCTGTAGAGGTCAGTTTTATATTTGCCAAACTCTGAAAATGGTAAAAGTAGCGTTCTATGAACAGTGATCAATTACTGTCTACCTAAGCACCACTGAACAATCGGTATTTATTTATTTATTTGGAAAAAAGAAATCTGGAGTAGCAGTAGACTATGTAGTATGTATAATGAATGATGATTTAGACTTCGCCTTAGGCTTTGACCGCAGCTTTCCAACTCGAAAAGATCATCGGAGCTCACGAAGATTTTCGAAGGAGGTACTTTCAGTGGACCAACAGGCTACAGGTATTCTAAATTGTTGGGTCATTATATTCCAAGAAGATTAGTCAAGCATCTTCTTGAATCTCTTGTACTCTTTTAGTCCTCGGATCCAAAGGGTAGCACTTGAGTAAAATTCTTATGCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATATATTTTTTCTTATTTTATTAAATTTATTTAATATATATATTATTTTAAAGCACTTTGAAACGATTGATCAATTTTTTAATACAAAAGAAACCAGTTTTTGAAAATAAGTCATTTTAGTTTATTATTATTATTATTATTACTTTTATTTAAATAATTTTTAAAATTTTTTATCTCTTAGGTGTTTCGATCTCATGGAACAATCATTTGACTCTACTACTCTTGATTGTTTAGAAAACTTATAAGACGAATAATTTTAGGTAGGAGTTTTTTTGGATAAGAATTTTAGGTAGGAATTAACTTAGCTTAAACTCATTTTCTCTTAAGTCTTTCTTATCTTTGTGACCCACAATATTTTTTTAGTTTAAAATTTGAAAACTATTTGATAAAAGATTACAGGATGATCAGAAAGAAAATCATTATCAAAGAGTTCTTAAACAATTATATTCAATTTTGTTAACTCAAATTGTTTACCTGAGCATTAAAGATGTTTGGAGCGCTGAGTTAGTTATTATAGTTAGTGATTATTATAGTTGATGAGTTATAATAGTTTGTAGGTTATAATAGTCTATGATTGGGGTGAAACTAGTTTAGTCTAGATTGTAGACTATTTTAATATAGGTCGAAAATAGTAAACATTTTAACAAAGAAGTAAAGAGGAGATGAGTGAAAAATAGTAAATACTAGTAAACAATGTAACATAGATGTATTTGAAATAGTAATATTATAGTTCATTATAGACTATAATAGTTGCAAACATCAACTATTATTATTTGCGCCTCAAAGATAGAGTGAACTATATTAGTCCACTTCATTTGAAATTGGGGTCCAAACACCCCTAACATTTTCCGATCATTATAGATCAATAATTCTTTTAATAGAAGTTTATAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGATAGTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGGGAAGGGGGAGTGAACTTGAGAGATCTAATCGGTGTCGGTGCCCCCGCGAGGCAGAAACCTCGTTTAGGAAGGCTGTAGAGAAATCTGGAGTAGCAGTAGACTATGTAGTATGTATAATGAATGATGATTTAGACTTCGCCTTAGGCTTTGACCGCAGCTTTCCAACTCGAAAAGATCATCGGAGCTCACGAAGATTTTCGAAGGAGGTACTTTCAGTGGACCAACAGGCTACAGAGCAACTGTATTGCATCGAATACGAAGTGCGTGTGATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCAAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTGCAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTACTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTCTTGA

Coding sequence (CDS)

ATGGGAAGGGGGAGTGAACTTGAGAGATCTAATCGGTGTCGGTGCCCCCGCGAGGCAGAAACCTCGTTTAGGAAGGCTGTAGAGAAATCTGGAGTAGCAGTAGACTATGTAGTATGTATAATGAATGATGATTTAGACTTCGCCTTAGGCTTTGACCGCAGCTTTCCAACTCGAAAAGATCATCGGAGCTCACGAAGATTTTCGAAGGAGGTACTTTCAGTGGACCAACAGGCTACAGAGCAACTGTATTGCATCGAATACGAAGTGCGTGTGATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCAAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTGCAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTACTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTCTTGA

Protein sequence

MGRGSELERSNRCRCPREAETSFRKAVEKSGVAVDYVVCIMNDDLDFALGFDRSFPTRKDHRSSRRFSKEVLSVDQQATEQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSWS

Homology

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BLAST of ClCG05G003630.1 vs. TrEMBL
Match: A0A0A0L6V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133250 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.3e-60
Identity = 115/141 (81.56%), Postives = 122/141 (86.52%), Query Frame = 1


Query: 57  TRKDHRSSRRFSKEVLSVDQQATEQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGG 116
           T +++  +  F K+ +       EQL+ IEYEVRVINGFTNNSSLPLVIWCASKD DIGG
Sbjct: 62  TNRNNCLTATFDKKTIKT---LKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGG 121

Query: 117 RALQEHDDFSWPVKTNFWITTT-SQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWL 176
           RALQEHDDFSWPVKTNFWITTT SQFSCTVKLDR RKSFDAFKVPRDIYRCS LRKCSWL
Sbjct: 122 RALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWL 181

Query: 177 VMEDGFYFSDDEVNWKKDFSW 197
           VMEDGFYFSDDEVNWKKDFSW
Sbjct: 182 VMEDGFYFSDDEVNWKKDFSW 199

[Close]

BLAST of ClCG05G003630.1 vs. TrEMBL
Match: M5XJ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-46
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 80  EQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTS 139
           +  Y IEY++RVINGFTNNSSLPLVIWCAS+ SD+GGRALQEHDDFSW ++TNFW  T  
Sbjct: 26  QNFYGIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRTNFW-GTND 85

Query: 140 QFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
            F CT+K DR R+SF+AFK PRD  RC   RKCSWLV EDGFYFS+DEVNW+KDFSW
Sbjct: 86  HFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRKDFSW 141

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BLAST of ClCG05G003630.1 vs. TrEMBL
Match: B9H006_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-44
Identity = 85/117 (72.65%), Postives = 95/117 (81.20%), Query Frame = 1


Query: 80  EQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTS 139
           E  Y +EY+VRVINGF NNSSLPLVIWC+S + D+GGRALQE DDFSW +KTNFW TT  
Sbjct: 26  EYFYGLEYDVRVINGFKNNSSLPLVIWCSSNNDDLGGRALQEGDDFSWSLKTNFWGTT-- 85

Query: 140 QFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
            F CT+K D  R+ FDAFKVPRD+ RCS  RKCSW V EDGFYFS+DEVNWKKDFSW
Sbjct: 86  HFLCTMKWDAMRRKFDAFKVPRDLQRCSLFRKCSWSVREDGFYFSNDEVNWKKDFSW 140

[Close]

BLAST of ClCG05G003630.1 vs. TrEMBL
Match: A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-44
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 1


Query: 82  LYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQF 141
           L+ + +EVRVINGF NNSSLPLVIWC+SK++D+GGRALQEHDDFSW V T  W   ++QF
Sbjct: 11  LHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLW--KSNQF 70

Query: 142 SCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
           SCT+K D  R+SFDAFKVPRD YRC   +KCSWLV EDGFYFS DE+NWKKDF W
Sbjct: 71  SCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQW 123

[Close]

BLAST of ClCG05G003630.1 vs. TrEMBL
Match: B9GMH5_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0001s14170g PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.0e-42
Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 1


Query: 81  QLYC-IEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTS 140
           + +C +EY+VRVINGFTNNSSLPLVIWC+S   D+GGRALQE DDFSW ++ NFW +  +
Sbjct: 26  EYFCGLEYDVRVINGFTNNSSLPLVIWCSSDSDDLGGRALQEGDDFSWRLQINFWCS--N 85

Query: 141 QFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
            F CT+K D  R+ FDAFKVPRD+ RCS  R CSWLV EDGFYFS+DEVNWKKDFSW
Sbjct: 86  HFRCTMKWDAMRRKFDAFKVPRDLQRCSPFRMCSWLVREDGFYFSNDEVNWKKDFSW 140

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BLAST of ClCG05G003630.1 vs. TAIR10
Match: AT3G24060.1 (AT3G24060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1


Query: 86  EYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTV 145
           E++VRVIN F +NSSLPLVIWC S   D+GGRALQE DDF W  K + W +  ++++CT+
Sbjct: 37  EFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDLW-SWMAEYTCTM 96

Query: 146 KLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
           K D  RK F+AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Sbjct: 97  KWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDFSW 146

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BLAST of ClCG05G003630.1 vs. NCBI nr
Match: gi|659075914|ref|XP_008438399.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60
Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 1


Query: 79  TEQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTT 138
           TEQL+ IEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTT
Sbjct: 36  TEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTT 95

Query: 139 -SQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
            SQFSCTVKLDR RKSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 96  TSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 154

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BLAST of ClCG05G003630.1 vs. NCBI nr
Match: gi|700201641|gb|KGN56774.1| (hypothetical protein Csa_3G133250 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 4.7e-60
Identity = 115/141 (81.56%), Postives = 122/141 (86.52%), Query Frame = 1


Query: 57  TRKDHRSSRRFSKEVLSVDQQATEQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGG 116
           T +++  +  F K+ +       EQL+ IEYEVRVINGFTNNSSLPLVIWCASKD DIGG
Sbjct: 62  TNRNNCLTATFDKKTIKT---LKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGG 121

Query: 117 RALQEHDDFSWPVKTNFWITTT-SQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWL 176
           RALQEHDDFSWPVKTNFWITTT SQFSCTVKLDR RKSFDAFKVPRDIYRCS LRKCSWL
Sbjct: 122 RALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWL 181

Query: 177 VMEDGFYFSDDEVNWKKDFSW 197
           VMEDGFYFSDDEVNWKKDFSW
Sbjct: 182 VMEDGFYFSDDEVNWKKDFSW 199

[Close]

BLAST of ClCG05G003630.1 vs. NCBI nr
Match: gi|449432460|ref|XP_004134017.1| (PREDICTED: uncharacterized protein LOC101218823 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 6.1e-60
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1


Query: 80  EQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTT- 139
           EQL+ IEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTT 
Sbjct: 28  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 87

Query: 140 SQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
           SQFSCTVKLDR RKSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 88  SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 145

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BLAST of ClCG05G003630.1 vs. NCBI nr
Match: gi|659075912|ref|XP_008438398.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 6.1e-60
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1


Query: 80  EQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTT- 139
           EQL+ IEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTT 
Sbjct: 41  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 100

Query: 140 SQFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
           SQFSCTVKLDR RKSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 101 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 158

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BLAST of ClCG05G003630.1 vs. NCBI nr
Match: gi|596253311|ref|XP_007224750.1| (hypothetical protein PRUPE_ppa024197mg [Prunus persica])

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-46
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 80  EQLYCIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTS 139
           +  Y IEY++RVINGFTNNSSLPLVIWCAS+ SD+GGRALQEHDDFSW ++TNFW  T  
Sbjct: 26  QNFYGIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRTNFW-GTND 85

Query: 140 QFSCTVKLDRARKSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW 197
            F CT+K DR R+SF+AFK PRD  RC   RKCSWLV EDGFYFS+DEVNW+KDFSW
Sbjct: 86  HFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRKDFSW 141

The following BLAST results are available for this feature:

BLAST of ClCG05G003630.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6V3_CUCSA	3.3e-60	81.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133250 PE=4 SV=1	[more]
M5XJ42_PRUPE	3.5e-46	72.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1	[more]
B9H006_POPTR	3.3e-44	72.65	Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g ...	[more]
A0A0A0LNI8_CUCSA	5.6e-44	71.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1	[more]
B9GMH5_POPTR	4.0e-42	69.23	Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0001s14170g ...	[more]

BLAST of ClCG05G003630.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24060.1	3.5e-37	61.26	Plant self-incompatibility protein S1 family	[more]

BLAST of ClCG05G003630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075914\|ref\|XP_008438399.1\|	1.6e-60	94.96	PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo]	[more]
gi\|700201641\|gb\|KGN56774.1\|	4.7e-60	81.56	hypothetical protein Csa_3G133250 [Cucumis sativus]	[more]
gi\|449432460\|ref\|XP_004134017.1\|	6.1e-60	94.92	PREDICTED: uncharacterized protein LOC101218823 [Cucumis sativus]	[more]
gi\|659075912\|ref\|XP_008438398.1\|	6.1e-60	94.92	PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo]	[more]
gi\|596253311\|ref\|XP_007224750.1\|	5.0e-46	72.65	hypothetical protein PRUPE_ppa024197mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G003630	ClCG05G003630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G003630.1	ClCG05G003630.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G003630.1.cds1	ClCG05G003630.1.cds1	CDS
ClCG05G003630.1.cds2	ClCG05G003630.1.cds2	CDS
ClCG05G003630.1.cds3	ClCG05G003630.1.cds3	CDS
ClCG05G003630.1.cds4	ClCG05G003630.1.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 89..196 score: 4.2
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 86..196 score: 9.5
None	No IPR available	PANTHER	PTHR31232:SF8	SUBFAMILY NOT NAMED	coord: 86..196 score: 9.5