ClCG05G000590.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000590.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Leucine-rich repeat (LRR) family protein LENGTH=857
Location	CG_Chr05 : 699361 .. 701746 (-)
Sequence length	957

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGGTTAGTTAAATTACTCCAAAATTAATTTATAGCCCCCTCAATATTCACTTTATTTACGGTAAAACTATTTGAAAATTTATATTGTCTATGTATTATAATCATCATCTTTTAAAATCCAAATTATAATAGTCTGCACATAATCACAAACTATTATACCAATAATAACCAATCCAACATTTCAATAGATCCTTATAATTTTTCTTTTAAAATCATCTAGCTAGTTGGTCTCGTTGTATTTGAGATAGTTGTACTCTCTAATATACCATGGTATTTTTGTTACTTAGCTATGGTAGAACTTTGGTTGCATTTCAATGATAGTAATAAATAAATAGACATCTTGTAAGTTTTGTTTAAAAAAAATATAATTAAATTCAACAATTACACTATAATGATAATTCTAAAACTTAATTAACATGTAAGATAGGTTAGATGATACACTATTAAATTTGCCTTCACCCATTAAGCTTAAGCTTTTTGGTCAATTAGTGATTAAACAAGGTATCGTAACAAGTGGTTTAGGAGGTTCTATGTTCAAACCTCTTTTCACCCCTTAAGCTTAAGATTTGGGTCAATTGGTGATTTAAGATAATATAAGCTACTAGATTGCGGGAATAAGGAACTATATTAATGTTTGATGCTTTTTTATTAAACACTAGAGATTGATTGAATAATGATTTTTTTTTTCTTTTTTTGTCAAATGTGTAATGGGTAACTTCCATGTGACTTTTTAGAATATCAAAAGGTTTTATAGGTATGTTTTGATAGTGATTTTAAAATTGTTAAAATCACTCATTTTTTTATGTTTAAAATTATTTGAAACACATATTTAATTACTCAAAATTAATTTAATATTTAATTTTGTACTATTAAATGTAATTTTCATTTCATCAAAGTTGAGTTTTAATCGTTAAAAACATGTTTTATAGTAATTTTAAAAATAACAAAAATAATTTTAATTATTTTAGGAGAACATCCAAACAAATCCTAAGAATATATTAGAGATCAATAATATTATATTATATGTTTAGGTGATTAACAACAAATTTTTAGACTAGTCTTCTTGTAACACCAACAAAGAGATGTGTTCATTCAAGTAAAAGCTCCAATGGAGCTAGCAAAGTGTCAAAGCACTCCACAAATATTATCTCTTCAATAGTCAAATCAACACTAGATTATAAATCCAATTAAAAAAGATTATTATTATTATTATTATTTTATATAAATTAGAAATATTTAGATGTATCTAGACAATACTTATATTTATGCACATGACAAATTATACTTACTTATTATATATATATATTATGCATGTGATGAAAGTGTGAGATGGATAAAAAGATGAATGCATTTTAGTATTATTCTTATATAAATATATATTTGAACTATATATCTAATTTTTAAAATGATAATTGATGAATAGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

mRNA sequence

ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Coding sequence (CDS)

ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Protein sequence

MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVMHITQSSDGSEILKKKPISKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHASTRH

Homology

[Close]

BLAST of ClCG05G000590.1 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.3e-110
Identity = 219/325 (67.38%), Postives = 247/325 (76.00%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           MSNLPRFGR WNRFSSLPRPG+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHIS 120
           R+ SP++K  SPPSSPKY GA T+SPRKPLSP P +NRY+GE RTSATTSPKTFKPTHIS
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHIS 120

Query: 121 PPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDE 180
           PP SP KP+HSTV T  APLSP A   ++V +   P+   R R   E E    +   T  
Sbjct: 121 PPPSPSKPRHSTVPTAVAPLSPLALPRSQVRRE--PEHSLRPRSPPEIEQKKILYQTT-- 180

Query: 181 PLDKTTEKSTKTDHWK--SEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVMH 240
               TTEK TKTDH++   EY + KP QK        QQ QQ QSDVINIKGEN+GAVMH
Sbjct: 181 ----TTEKPTKTDHYRQNDEYGASKPQQK--------QQHQQLQSDVINIKGENVGAVMH 240

Query: 241 ITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSHR 300
           ITQSSDGSE++KKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYNSSLSHR
Sbjct: 241 ITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHR 300

Query: 301 DPGLHLAY-SKKPNHGDSLHASTRH 319
           DPGLHLA+ SKK  HGDS+H S RH
Sbjct: 301 DPGLHLAFGSKKSKHGDSIHDS-RH 308

[Close]

BLAST of ClCG05G000590.1 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 113/326 (34.66%), Postives = 158/326 (48.47%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPR GRT  R SS+P P  +A++P ++P     + E  P A + T     SP RE  
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEP-----KYETMPYATSITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHI 120
             + SP +K  SP +S         + R P  P    ++Y  E R   TT          
Sbjct: 61  RPLSSPSKKATSPFASRVDSSPAAKATRSP--PDSIGDKYL-ERRNGETT---------- 120

Query: 121 SPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAIT---LM 180
            PPL+P K   S  A T+PLSP A   ++VI          G  A +P V P +    ++
Sbjct: 121 -PPLTPAK---SRPAKTSPLSPLALPRSQVITGN-------GTTA-QPRVQPEVETKGIV 180

Query: 181 TDEPLDKTTEKSTKTDHWKSEYTSDKP-HQKKNQYQHQHQQQQQQQSDVINIKGENIGAV 240
            ++  D+   KS +    +SE+ S K  HQK            QQ+  V+ +KG N+GAV
Sbjct: 181 YNKAADEKPSKSNR----QSEHGSGKSVHQK------------QQKPGVMKLKGHNVGAV 240

Query: 241 MHITQSSDG----SEILKKKPISKE-------NEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           M + +SS G     E LKKK    +       +E+K        P  +FMN+NFQ VNNS
Sbjct: 241 MEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNS 277

Query: 301 ILYNSSLSHRDPGLHLAYSKKPNHGD 311
           +L++SS  HRDPGLHL++   PN  D
Sbjct: 301 LLFDSSCQHRDPGLHLSF---PNAAD 277

[Close]

BLAST of ClCG05G000590.1 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.0e-22
Identity = 92/319 (28.84%), Postives = 141/319 (44.20%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           M+NLPR+GR W R S++ R    +   +Q      EPE+ P APT   +    P    + 
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQE----PEPEILPLAPTIQTLQPFEPTPPAAA 60

Query: 61  RVPS-----PIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFK 120
             PS     P  ++  P +SPKY          PL P                       
Sbjct: 61  APPSSTPGEPTPRISPPAASPKYEATVIREASPPLKPAR--------------------- 120

Query: 121 PTHISPPLSPPK----PKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTP 180
               SPP+SPP+    P+HS       +SP   ++ E ++   P +     + +  +VT 
Sbjct: 121 ----SPPVSPPRKSVDPRHS-------ISP--NSYQEPLKPTRPSLSTLA-LPKSADVTT 180

Query: 181 AITLMTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGEN 240
             + +  E +++ T+   K+D      ++  P                 Q+  IN+ G+N
Sbjct: 181 VPSAIKPE-VEQKTDSFKKSDRQVDNVSAKPP--------------PSLQAKAINLTGDN 240

Query: 241 IGAVMHITQSSD---GSEILKK----KPISKENEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           IGAVM I Q SD   G E+ +K      + +EN+ + ++  +  P     N+NFQ VNNS
Sbjct: 241 IGAVMKINQFSDKISGGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNS 264

Query: 301 ILYNSSLSHRDPGLHLAYS 304
           ++YNSS S RDPGLHL +S
Sbjct: 301 VMYNSSCSGRDPGLHLDFS 264

[Close]

BLAST of ClCG05G000590.1 vs. TrEMBL
Match: Q9ZNU3_ARATH (Putative extensin OS=Arabidopsis thaliana GN=At2g46630 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.8e-21
Identity = 95/339 (28.02%), Postives = 139/339 (41.00%), Query Frame = 1


Query: 20  PGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYG 79
           P S  R + QPLT   +     S P   + Y + P R  SP  P      P PP    Y 
Sbjct: 63  PPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYT 122

Query: 80  GATT-------ISPRKPLSP-TPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHS 139
              +       + PRKP SP +P ++      R++ + S KT  P+        P P+  
Sbjct: 123 SPPSPKEVQEALPPRKPNSPPSPAHSS-----RSTTSESVKTRSPSESENHRKAPSPR-- 182

Query: 140 TVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDEPLDKTTEKSTKT 199
                +P S PA       +T   +++   + ++  E         +   D     +   
Sbjct: 183 ---VLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHH---NQNHNHDYNQNHNYNQ 242

Query: 200 DHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSD------VINIKGENIGAVMHITQSSDGS 259
           +H    Y  ++ HQ  N  +  H+Q     S+      VI I GEN GAVM I +S  G+
Sbjct: 243 NH---SYNQNQNHQGNNP-KKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGN 302

Query: 260 EI--------------------LKKKPISKENEEKA---------NKSTSNLPSKSFMNT 316
           +                     L+    S  +E +          NK  SNLP K+FMN+
Sbjct: 303 KTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNS 362

[Close]

BLAST of ClCG05G000590.1 vs. TrEMBL
Match: D7LF69_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904132 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 99/341 (29.03%), Postives = 141/341 (41.35%), Query Frame = 1


Query: 19  RPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPS--------PIRKLP 78
           +P S  R + QPLT   + +   S P   + Y + P R  SP  P         P R   
Sbjct: 62  QPPSPPRQQQQPLTPPRQQQQPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSY 121

Query: 79  SPPSSPKYGGATTISPRKPLSP-TPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPK 138
           +PP SPK      + PRKP SP +P ++      R++++ S KT   +        P P+
Sbjct: 122 TPPPSPKEV-QEALPPRKPNSPRSPAHSS-----RSTSSESVKTRSASESENHRKAPSPR 181

Query: 139 HSTVATTAPLS-PPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDEPLDKTTEKS 198
                  +P S PP++  +E   T+            +  +T   T  T EP       +
Sbjct: 182 -----VLSPYSLPPSQLHSERETTQ------------KNILTAEKTSQTHEPSHHNQNHN 241

Query: 199 TKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSD------VINIKGENIGAVMHITQS- 258
              +H    Y  +  HQ  N  +  H+Q     S+      VI I GEN GAVM I +S 
Sbjct: 242 YNQNH---NYNQNHNHQGNNP-KKMHRQPSTSDSENIMSTRVITIAGENKGAVMEILRSP 301

Query: 259 ---------------------------SDGSEILKKKPISKENEEKANKSTSNLPSKSFM 316
                                      S  S    +    K+  +  N   SNLP K+FM
Sbjct: 302 QGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNPNNGNSNLPMKAFM 361

[Close]

BLAST of ClCG05G000590.1 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 95/339 (28.02%), Postives = 137/339 (40.41%), Query Frame = 1


Query: 20  PGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYG 79
           P S  R + QPLT   +     S P   + Y + P R  SP  P      P PP    Y 
Sbjct: 63  PPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYT 122

Query: 80  GATT-------ISPRKPLSP-TPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHS 139
              +       + PRKP SP +P ++      R++ + S KT  P+        P P+  
Sbjct: 123 SPPSPKEVQEALPPRKPNSPPSPAHSS-----RSTTSESVKTRSPSESENHRKAPSPR-- 182

Query: 140 TVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDEPLDKTTEKSTKT 199
                +P S PA       +T   +++   + ++  E         +   D     +   
Sbjct: 183 ---VLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHH---NQNHNHDYNQNHNYNQ 242

Query: 200 DHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSD------VINIKGENIGAVMHITQSSDGS 259
           +H    Y  ++ HQ  N  +  H+Q     S+      VI I GEN GAVM I +S  G+
Sbjct: 243 NH---SYNQNQNHQGNNP-KKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGN 302

Query: 260 EI--------------------LKKKPISKENEEKA---------NKSTSNLPSKSFMNT 316
           +                     L+    S  +E +          NK  SNLP K+FMN+
Sbjct: 303 KTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNS 362

[Close]

BLAST of ClCG05G000590.1 vs. TAIR10
Match: AT4G22505.1 (AT4G22505.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06
Identity = 46/128 (35.94%), Postives = 54/128 (42.19%), Query Frame = 1


Query: 18  PRPGSASRPEIQPLTAA-TEPEVFPSAPTTT--NIYKTSPIRERSPRVPSPIRKLPSPPS 77
           PR  S S P   PL+   T P   P AP     N   TSP     PR P P+    +PP+
Sbjct: 172 PRTPSTSPPRAPPLSPPRTPPTSPPRAPPVPPPNTPPTSP-----PRAP-PLSPPRTPPN 231

Query: 78  SPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVA 137
           SP     T+  PR P  P P         R S T  P+       +PPLSPP+   ++  
Sbjct: 232 SPPRTPPTS-PPRAPPVPPP---------RISPTAPPR-------APPLSPPRTPPTSPP 276

Query: 138 TTAPLSPP 143
            T PLSPP
Sbjct: 292 RTPPLSPP 276

HSP 2 Score: 46.2 bits (108), Expect = 4.3e-05
Identity = 52/140 (37.14%), Postives = 58/140 (41.43%), Query Frame = 1


Query: 18  PRPGSASRPEIQPLTAA-TEPEVFPSAPTTT--NIYKTSPIRE---RSPRVP--SPIRKL 77
           PR  S S P   PL+   T P   P AP     N   TSP R      PR P  SP R  
Sbjct: 172 PRTPSTSPPRAPPLSPPRTPPTSPPRAPPVPPPNTPPTSPPRAPPLSPPRTPPNSPPRTP 231

Query: 78  P-SPPSSPKYGG---ATTISPRKP-LSPTPTYNRYDGEWRTSATTSPKT--FKPTHISPP 137
           P SPP +P       + T  PR P LSP           RT  T+ P+T    P  I+PP
Sbjct: 232 PTSPPRAPPVPPPRISPTAPPRAPPLSPP----------RTPPTSPPRTPPLSPP-ITPP 291

Query: 138 LSPPKPKHSTVATTAPLSPP 143
            SPP+    +   T P SPP
Sbjct: 292 TSPPRAPPLSPPRTPPTSPP 300

HSP 3 Score: 41.2 bits (95), Expect = 1.4e-03
Identity = 38/127 (29.92%), Postives = 50/127 (39.37%), Query Frame = 1


Query: 18  PRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLP-SPPSSP 77
           PR    + P   P++    P + P  P T    +T P+        SP R  P SPP +P
Sbjct: 85  PRTPPTAPPRTPPVSPRIPPILPPKTPPTAPP-QTPPVSPPKSPPNSPPRAPPLSPPRTP 144

Query: 78  KYGGATTISPR-KPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVAT 137
                 T  PR  PLSP           RT  T+ P+       +PP+ PP+   ++   
Sbjct: 145 P-----TSPPRVPPLSPP----------RTPPTSPPR-------APPIPPPRTPSTSPPR 188

Query: 138 TAPLSPP 143
             PLSPP
Sbjct: 205 APPLSPP 188

HSP 4 Score: 40.8 bits (94), Expect = 1.8e-03
Identity = 39/128 (30.47%), Postives = 49/128 (38.28%), Query Frame = 1


Query: 15  SSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPS 74
           +S PR    S P   P    + P V P +P  T    TSP   R+P +P P     SPP 
Sbjct: 129 NSPPRAPPLSPPRTPP---TSPPRVPPLSPPRTP--PTSP--PRAPPIPPPRTPSTSPPR 188

Query: 75  SPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVA 134
           +P            PLSP           RT  T+ P+       +PP+ PP    ++  
Sbjct: 189 AP------------PLSPP----------RTPPTSPPR-------APPVPPPNTPPTSPP 220

Query: 135 TTAPLSPP 143
              PLSPP
Sbjct: 249 RAPPLSPP 220

HSP 5 Score: 39.3 bits (90), Expect = 5.3e-03
Identity = 42/137 (30.66%), Postives = 52/137 (37.96%), Query Frame = 1


Query: 15  SSLPRPGSASRPEIQ-------PLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPI- 74
           +S PRP +   P          P T  T P   P  P T       P   R+PR P P  
Sbjct: 27  NSRPRPRTPPPPRTPRTPSPPPPRTPKTPPPPPPRTPRTP-----PPPPPRTPRTPPPPP 86

Query: 75  -RKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSP 134
            R   +PP++P       +SPR P    P         +T  T  P+T     +SPP SP
Sbjct: 87  PRTPRTPPTAPPR--TPPVSPRIPPILPP---------KTPPTAPPQT---PPVSPPKSP 140

Query: 135 PKPKHSTVATTAPLSPP 143
           P    ++     PLSPP
Sbjct: 147 P----NSPPRAPPLSPP 140

[Close]

BLAST of ClCG05G000590.1 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 6.1e-110
Identity = 219/325 (67.38%), Postives = 247/325 (76.00%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           MSNLPRFGR WNRFSSLPRPG+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHIS 120
           R+ SP++K  SPPSSPKY GA T+SPRKPLSP P +NRY+GE RTSATTSPKTFKPTHIS
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHIS 120

Query: 121 PPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMTDE 180
           PP SP KP+HSTV T  APLSP A   ++V +   P+   R R   E E    +   T  
Sbjct: 121 PPPSPSKPRHSTVPTAVAPLSPLALPRSQVRRE--PEHSLRPRSPPEIEQKKILYQTT-- 180

Query: 181 PLDKTTEKSTKTDHWK--SEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVMH 240
               TTEK TKTDH++   EY + KP QK        QQ QQ QSDVINIKGEN+GAVMH
Sbjct: 181 ----TTEKPTKTDHYRQNDEYGASKPQQK--------QQHQQLQSDVINIKGENVGAVMH 240

Query: 241 ITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSHR 300
           ITQSSDGSE++KKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYNSSLSHR
Sbjct: 241 ITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHR 300

Query: 301 DPGLHLAY-SKKPNHGDSLHASTRH 319
           DPGLHLA+ SKK  HGDS+H S RH
Sbjct: 301 DPGLHLAFGSKKSKHGDSIHDS-RH 308

[Close]

BLAST of ClCG05G000590.1 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 7.5e-108
Identity = 222/326 (68.10%), Postives = 247/326 (75.77%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQP-LTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           MSNLPRFGRTWNRFSSLPRP +A+R E QP  TAATEPEVFPSA  TTN  +TSP+++R+
Sbjct: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGAT-TISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTH 120
           PR+ SP++K PSPPSSPKY GAT TISPRKPLSP  TYNR+DGE RTSATTSPKTFKPT+
Sbjct: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120

Query: 121 ISPPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMT 180
           ISPP SPPKPKHST AT  APLSP A   +EV +   P+   R R   E E    +   T
Sbjct: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRRE--PERSIRPRSPPEIEQKKILYQTT 180

Query: 181 DEPLDKTTEKSTKTDHWKS-EYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVM 240
                 TTEK TKTD+ ++ +Y + KP QK        Q  QQ QSDVINIKG+N+GAVM
Sbjct: 181 ------TTEKPTKTDYRQTDQYGTSKPQQK--------QHHQQLQSDVINIKGDNVGAVM 240

Query: 241 HITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSH 300
           HITQSSDGSEILKKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYNSSLSH
Sbjct: 241 HITQSSDGSEILKKKPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSH 300

Query: 301 RDPGLHLAY-SKKPNHGDSLHASTRH 319
           RDPGLHLAY SK P HGDS+H S RH
Sbjct: 301 RDPGLHLAYSSKNPKHGDSIHES-RH 309

[Close]

BLAST of ClCG05G000590.1 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 2.1e-33
Identity = 116/322 (36.02%), Postives = 155/322 (48.14%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPRFGR   R  ++P P  +A++P ++P       ++ P A T T     SP RE  
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEP-----RYQILPFATTITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKP-----LSPTPTYNRYDGEWRTSATTSPKTF 120
             + SP +K  SP +SPKYG + T   R P     +SP  +      E R   TT     
Sbjct: 61  RPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETT----- 120

Query: 121 KPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELP-DMIFRGR-VAREPEVTPA 180
                 PPLSP K +    A T PLSP A          LP + +F G     +P V P 
Sbjct: 121 ------PPLSPAKSRR---AKTPPLSPLA----------LPRNQVFTGNGTTAQPRVQPE 180

Query: 181 ITLMTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENI 240
           +        +KT EK +K++    EY S K HQKK            Q+ +VI +KG N+
Sbjct: 181 VETK-GIVYNKTVEKPSKSNRSSGEYGSSKSHQKK------------QKPEVIKLKGHNV 240

Query: 241 GAVMHITQSSDG----SEILKKKPISK--------ENEEKANKSTSNLPSKSFMNTNFQG 300
           GAVM I +SS G     E LKK               ++K        P  +FMN+NFQ 
Sbjct: 241 GAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQS 280

Query: 301 VNNSILYNSSLSHRDPGLHLAY 303
           VNNS+L++SS +HRDPGLHLA+
Sbjct: 301 VNNSLLFDSSCNHRDPGLHLAF 280

[Close]

BLAST of ClCG05G000590.1 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 113/326 (34.66%), Postives = 158/326 (48.47%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPR GRT  R SS+P P  +A++P ++P     + E  P A + T     SP RE  
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEP-----KYETMPYATSITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHI 120
             + SP +K  SP +S         + R P  P    ++Y  E R   TT          
Sbjct: 61  RPLSSPSKKATSPFASRVDSSPAAKATRSP--PDSIGDKYL-ERRNGETT---------- 120

Query: 121 SPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAIT---LM 180
            PPL+P K   S  A T+PLSP A   ++VI          G  A +P V P +    ++
Sbjct: 121 -PPLTPAK---SRPAKTSPLSPLALPRSQVITGN-------GTTA-QPRVQPEVETKGIV 180

Query: 181 TDEPLDKTTEKSTKTDHWKSEYTSDKP-HQKKNQYQHQHQQQQQQQSDVINIKGENIGAV 240
            ++  D+   KS +    +SE+ S K  HQK            QQ+  V+ +KG N+GAV
Sbjct: 181 YNKAADEKPSKSNR----QSEHGSGKSVHQK------------QQKPGVMKLKGHNVGAV 240

Query: 241 MHITQSSDG----SEILKKKPISKE-------NEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           M + +SS G     E LKKK    +       +E+K        P  +FMN+NFQ VNNS
Sbjct: 241 MEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNS 277

Query: 301 ILYNSSLSHRDPGLHLAYSKKPNHGD 311
           +L++SS  HRDPGLHL++   PN  D
Sbjct: 301 LLFDSSCQHRDPGLHLSF---PNAAD 277

[Close]

BLAST of ClCG05G000590.1 vs. NCBI nr
Match: gi|778676797|ref|XP_011650663.1| (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 2.8e-22
Identity = 92/319 (28.84%), Postives = 141/319 (44.20%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           M+NLPR+GR W R S++ R    +   +Q      EPE+ P APT   +    P    + 
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQE----PEPEILPLAPTIQTLQPFEPTPPAAA 60

Query: 61  RVPS-----PIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFK 120
             PS     P  ++  P +SPKY          PL P                       
Sbjct: 61  APPSSTPGEPTPRISPPAASPKYEATVIREASPPLKPAR--------------------- 120

Query: 121 PTHISPPLSPPK----PKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTP 180
               SPP+SPP+    P+HS       +SP   ++ E ++   P +     + +  +VT 
Sbjct: 121 ----SPPVSPPRKSVDPRHS-------ISP--NSYQEPLKPTRPSLSTLA-LPKSADVTT 180

Query: 181 AITLMTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGEN 240
             + +  E +++ T+   K+D      ++  P                 Q+  IN+ G+N
Sbjct: 181 VPSAIKPE-VEQKTDSFKKSDRQVDNVSAKPP--------------PSLQAKAINLTGDN 240

Query: 241 IGAVMHITQSSD---GSEILKK----KPISKENEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           IGAVM I Q SD   G E+ +K      + +EN+ + ++  +  P     N+NFQ VNNS
Sbjct: 241 IGAVMKINQFSDKISGGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNS 264

Query: 301 ILYNSSLSHRDPGLHLAYS 304
           ++YNSS S RDPGLHL +S
Sbjct: 301 VMYNSSCSGRDPGLHLDFS 264

The following BLAST results are available for this feature:

BLAST of ClCG05G000590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5T3_CUCSA	4.3e-110	67.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1	[more]
A0A0A0L320_CUCSA	1.0e-26	34.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1	[more]
A0A0A0L8G8_CUCSA	2.0e-22	28.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1	[more]
Q9ZNU3_ARATH	4.8e-21	28.02	Putative extensin OS=Arabidopsis thaliana GN=At2g46630 PE=4 SV=1	[more]
D7LF69_ARALL	1.1e-20	29.03	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of ClCG05G000590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	2.4e-24	28.02	unknown protein	[more]
AT4G22505.1	1.8e-06	35.94	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of ClCG05G000590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432016\|ref\|XP_004133796.1\|	6.1e-110	67.38	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]	[more]
gi\|659074888\|ref\|XP_008437849.1\|	7.5e-108	68.10	PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me...	[more]
gi\|659074890\|ref\|XP_008437851.1\|	2.1e-33	36.02	PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]	[more]
gi\|449432018\|ref\|XP_004133797.1\|	1.4e-26	34.66	PREDICTED: atherin-like [Cucumis sativus]	[more]
gi\|778676797\|ref\|XP_011650663.1\|	2.8e-22	28.84	PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G000590	ClCG05G000590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G000590.1	ClCG05G000590.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G000590.1.cds2	ClCG05G000590.1.cds2	CDS
ClCG05G000590.1.cds1	ClCG05G000590.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 22..313 score: 3.0
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 22..313 score: 3.0