ClCG04G004950.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG04G004950.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr04 : 18459715 .. 18464240 (+)
Sequence length455
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCTTGGTCCAGCGGCTGTAGGGGATCGTTCTCGGCAGGCCTCCAACCTGCTGGGATGGTTGCAAGGCGGTCTGACAGACTTTCAAACATTTTTCTTGTTTGTTTTTCTCATCTTTCTTGGGTTGCTTCCGTTATGTATTTCTTCAATGGGTTTGAATTTGTACTACTGCTATGGTGTTTTGAGATTAATGCGATGGTGGAAATTTGAAATTTTTGTTCTTTGCTTTGCTTTTTTCATCTTTGGGCTGCTTGCGTTTTCTGTTTTTCTTCAATGGGCTTGTATTTATGTCTACTGCTATGATGTTTTGAGAGTAGAAAGATGGGGTTTAATGCGATGGTGGGTATTTGATTTATGCTCGTAAGGTGTTTGATGATAGGTCTCTGAAACCGGAGGTTAATCCCTTTACTGATGCTTACATGGCTGTTTTGTCTGTCCGTTTTCATGTAAAATCTCTGGATCCAAGCTCGAAATTCACGGCAAGAATGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGTGTTTTGGTTTATTTTCCATTCTTCTTCTAAGGAGATATTACGAAAGTTTTGGGTATCTTTGGTTTTGGATGCAACTATTCCAAAATTTCGATCTTTTGATATGTTAACTCTTTGACTATCTAAATGTTACGATTTTTAAATGTTCAAGTGACTAAAGCAATGATCCTACAGGTACTCAAATCGGATATTGTATATCTTTTTTCACAAGATGGTATGATACAAAAGAAGAAGGTCAAATTGTACTTTATCGCATTGATGGTGTGTTCTAGGTAGAAGAAACGACAAATTCAAAGAGCATTCTCTTTTGAGGCTTACAAATGGTAAGGTAGGGTAGCTATCTCTATCTATTGTAATGAATGTCCTTAGAGTCGTTTTTGATTGGCCATCCATATATGAAGGAAAGAAAGCATCTATAACTCCCAATCGATTAGAGCCATCTTTGGGTTGGCTTGGATTAAGAGAAACTGATGAGGAGAATTAGAAGATGATTAGTGTGTTTTAATCTATGGCCTAAATACCTTTCTCGCTGCATCAGAAACAACCGCTTATTCGACAACTCCGTCATTAATTTTTATAGGTTCTTTTCAACTTCACCAATATTTCAAAGGCTATTCAATGTATTTCAAAAGTACACCAATCTTGATGATCTAAAGGCTTAAGTGCAGATCTAACACAACAGTGAGATGTTGGAGGTGTTTTGTCTTGTATTTTTTTCATAATGAAGTTTCATTAATCACAAGTTTTTCAACAAGGCTCCGTCTGATTTCCTCTTGGCATTGGACTTTGGATTGAAAAAGACTAGAAAGTATACATTAAGCACATGTGATATGTTCAGCTTTGTACTTGTCTATATTGGAGTTATGTTTCAGTTATTTCATTTATCCAAAGTTGGTTGTTTGGTTATGTTTAGTTAGTTAGTCAGCTGTGAGTTTTGTTAACCACCATGAATATTTATACATTTCTTTTATGGAGAGTTCAATCGAACAAAGATTCCTTTGCTGCAAATTTTTCTTCTGCCCTATTATTCTGACGATTTCTACTGCAAATTAAACTGTAGCGAAAGCTCCTTCTGCACCTTCAACAACTTCATCACAATGCCATACCTTAATGTTCTTCAAACACAGTTCCAAGCAGCCAAATCTGAGCTAGGACTTGTTCAACATATAAGGCAGGGTACACGATCTAGTTCTCCCTTGCCTATATACTTGTCTGGGTGGTGGGTTATTGATTTTGGTGCTTCCATGCACATTTGTTTTTCTCGAAGGAGTTATTTGAGCCATTGTCTCCAATTACAACTACTGTCATTTTGCCTATCAACACATTCCTGAATGCATTATGTTGGCACTATTCGATGATTAGATTCGTTATATTTTCTAGAGGTTCTATTGTTACCCAATTTCAGTATGATTTGCTTTCTGTTAGTACATTAGGACACATCTATTTCTCTTCAATTTCTTGGTTACAGGACAAGTAGTGGAGTTTGAGGATAATTGGGAATGGTTGTTTGCACCATGGCTTGTTCTTACTTGATGTTTCAGTTACTGGATGAGTTTCTGTGGTTTCTCCTACTAAATTTTGTGTTCTATTGTTTGTAAGAAGTCTACTACTCTATAGCAAAATCATCTTCTTCACCTTTCTTATTGTAGTTTAGAAGTCCTAACGTTTATATAGTCAAAGAGGCAACATATCAAAGATTGAAAATTTGAAATAAATGCATCCAAAACCAAAGCTACCCAAACCTTTAGTAATATCTCCTTAGGAGAAGAATGGAAAAGAAACTAAAAAATTCCAACAGACAACATTCTTGCTGTGAGTTTCGTGCTTAGCTCCAACGATGATGTTACATGAAAACGGAAGGAGAAAACAGCCATGTAAGCATCAGAAAACGATTAGCCTCTGGTTTCAGAGACATCATCGAACATCTTCCAAGCAAAAACCAAATATCCACCATCGTATTAAACCCCATCTCTCTAATCTCAAACCACCATAGCAGTAGCACATATTCAAACCCATTCAAGAAATACGGAAAATGCAAGCAGCCCAAAGACAAAAAGGTTTGAAGTCTTTCAGACCGCCATGCGACCATCCCTTTAACTTGTTCATGTTGATATCTAGGGTCATTTTTCAGTTCAACAATTACGAGAGTGGGATATTAGAGGTTATTTTTCAAACTCTACCCATATTAAATGTACATATTTTCTCACTGTTGATGGGAGGTTGTATGGATGACGTAAAATTTGTGCCCCAAAATGATATTTGTCCCACTTTTTAAGCTGGTGTCATCAAGTGAAATTACCTAAAGCCCCTTTCTTCAAATGAATAACGTATCTCCTCTTCCTCATTCTCTCAGACTTCTTCACATTCCCTCTCCCTCTCTCTTGACAATGACCTTGAGAAAACCCAACCTTTCGATCGTCCATCTGTCCATCTCAACCATTGTTCGGATTCGTTTGGGAATTAATCATCTATTACGTTTGTTTTTTAAGGATTTAGGGTTGAAATTGAATCATGAATTTGTGATTTGGGTTTTCGGATTTGCATGAAATCAGTGATTCGGGTTTTCAGATTCACATGAAACTGGTGGTTGAAATTTTTTATTTTGGGCTTGACATCATTTGGTGGGTTTGGGTATATGATCTGAGAGAAGTTTTACAAATAGCAAAGCGAGAGGGTGAGAGGAAGAATATGACCAACGAACGAATGAAACTAAGAACAGAGAGCAAGACAATAAGAAGAGGAGGATGATATACGAGGGAAATTATGGCTAGAGAGCGAGTAACTAAGAGCGAGATAGATACACTATTAAGACCAGAGAGAGCGAGACTTCCACAGCGAGAGAGATAAGCAAAGAGTGAGAGAGCTAGACTTTGGCAACTTGGTTTATTTCCTTTGGGTTAGCTAGTGAGACAAAATGCTTTGTATATGCAGGTCTAAGATGCCAACAGGTTGAAAGATATCTGAGGGCGATCACTTTCCTGGCCAAGTAACAAGCTTGGCCCACATAGGGACTGTGAACAAGATTGTCAAGGACAAACTTTCCCCCAAGCAACTTGAGATGTTGAAGAGAACAATCTTTAGGCGGTTTGTGGACATTGACTTGGTTTTCAACACCCCCTTGTCCACCACATTTTCGAAGGATCAGTTTCTGTTGACGACTGATTTGTGGCTGCCCCTACTGGAGTGGTTTGGAATGAGAAAGCTTCTGAAGAATTAGAAAGGAAATATTTTAGTAATAGGTAATGTAGGTACCTGAGATGAATGTTTGTAGTCAGTCGTCTGGAGATCCATCAGTGCCCATGGTATGTTATTTAAACCCTATACTTATGGGCATTATTTATATATTTTCATGACTAATATCAAGATTATAATGTAGGTACCTGCTCCATCTAGAAGTCACATAATACAGTTGGGCTCGTTTGACGCATTTTATAAGGGTGTTATGCATCAATGTTCTTGTTTAGGAAGACCTAAAAGAAATCCTATTGTTGCAGAAGCACTCCTTAGAATGAAGGCTTACAAAGCTCTTTGATATGGAAAAGAGATGTTTCTAAATATTTC

mRNA sequence

ATGGACCTTGGTCCAGCGGCTGTAGGGGATCGTTCTCGGCAGGCCTCCAACCTGCTGGGATGGTTGCAAGGCGTGTTTTGGTTTATTTTCCATTCTTCTTCTAAGGAGATATTACGAAACGAAAGCTCCTTCTGCACCTTCAACAACTTCATCACAATGCCATACCTTAATGTTCTTCAAACACAGTTCCAAGCAGCCAAATCTGAGCTAGGACTTGTACCTGAGATGAATGTTTGTAGTCAGTCGTCTGGAGATCCATCAGTGCCCATGGTACCTGCTCCATCTAGAAGTCACATAATACAGTTGGGCTCGTTTGACGCATTTTATAAGGGTGTTATGCATCAATGTTCTTGTTTAGGAAGACCTAAAAGAAATCCTATTGTTGCAGAAGCACTCCTTAGAATGAAGGCTTACAAAGCTCTTTGATATGGAAAAGAGATGTTTCTAAATATTTC

Coding sequence (CDS)

ATGGACCTTGGTCCAGCGGCTGTAGGGGATCGTTCTCGGCAGGCCTCCAACCTGCTGGGATGGTTGCAAGGCGTGTTTTGGTTTATTTTCCATTCTTCTTCTAAGGAGATATTACGAAACGAAAGCTCCTTCTGCACCTTCAACAACTTCATCACAATGCCATACCTTAATGTTCTTCAAACACAGTTCCAAGCAGCCAAATCTGAGCTAGGACTTGTACCTGAGATGAATGTTTGTAGTCAGTCGTCTGGAGATCCATCAGTGCCCATGGTACCTGCTCCATCTAGAAGTCACATAATACAGTTGGGCTCGTTTGACGCATTTTATAAGGGTGTTATGCATCAATGTTCTTGTTTAGGAAGACCTAAAAGAAATCCTATTGTTGCAGAAGCACTCCTTAGAATGAAGGCTTACAAAGCTCTTTGA

Protein sequence

MDLGPAAVGDRSRQASNLLGWLQGVFWFIFHSSSKEILRNESSFCTFNNFITMPYLNVLQTQFQAAKSELGLVPEMNVCSQSSGDPSVPMVPAPSRSHIIQLGSFDAFYKGVMHQCSCLGRPKRNPIVAEALLRMKAYKAL
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG04G004950ClCG04G004950gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG04G004950.1ClCG04G004950.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G004950.1.cds1ClCG04G004950.1.cds1CDS
ClCG04G004950.1.cds2ClCG04G004950.1.cds2CDS
ClCG04G004950.1.cds3ClCG04G004950.1.cds3CDS
ClCG04G004950.1.cds4ClCG04G004950.1.cds4CDS
ClCG04G004950.1.cds5ClCG04G004950.1.cds5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G004950.1.three_prime_UTR1ClCG04G004950.1.three_prime_UTR1three_prime_UTR