ClCG04G004810.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAATGGAGTGTGTTCATCAATTAAAGTTTAACAAATTATTAGAACATCTTATTTAACTGACAAGCTGCAAACATAGGCTTTATTGTTTTAGCTTCTTGGATTGCTACTTATTTTTGCTCTTCTTCTTCAGCTAAGCAGACCAGTATAACTTATACGATCACAACTCTATTCACACGCACTCTCTTCATTATGGCATCCGAGGGTTCTGAATCAAAGGTACGCATGTTTTCAACCTCCTTTCCCTGGAGAAACGTTTCCTGATATTATGAGATTTTCGTGTAAATAATATGTTTAGAAACTAGTGGATTGTAAGGATGACTACGTGCAGCGAGGGCATGGTTGTTTAAAGGGAAAGATGGATCAGTTGATCCATGTTTGTAAGGTCGGCATAGGTGGAGTCCATTTCTTATATTGAGCCTAAAAATGTAGTTTTTGCCATGCAATTCTGTTCCATATTCTTACAATCGTCTTTGAATCGACAAGAGGAGAGGGGCTACCGTTTCTCAAGTGATTATAGAGTAAGGCGATTTCTAGGGTGATTGTGAAGTAAAAAGCCTATAGGGGTGTTGTGAAGGTAGTTGGTGTAAAAGAGGCAATAACATGGCAGTAAATGAGAAGAGTTTTGGTGTAGATGACAAGGAGCGTGGAATAGGGTACAAGAAAGATATGGGCGTTTAGGTAGTGATTGATTGGTTAGTTAGTTGAACAAGGGTAACTTGACACTTAAACACATGGAAGTAATGTATGAGTGAGTAGAGAAGGAGGTAGTAAGATTCTGATAGTTGGTGGGAGTTTGTTGTAAATTGTTATGCTTAGTATTACTCTAATTGGAATTGTGGCTGTCCGTGTTGACTTATTGGTATAATTAAATATACCGTAACCCATCATCTTAGGCTTTTGAGTTGATTGGTGATTTTGGTGATTTTCCATGGTATCAGAGCAGGAGATCATTATCCTTGTAATGTCATTTCCTCCCCAATTTATATTAATTTCTGCTTGGTGGGTCTTTTACAAAATTTCAAGCCCACAAGTTAGGGAGAGTTCAAGTATAGATACCATAACCCATTTATTTAAGTTTTTGGGTTTATTGGTGATTTATTGGTGATTTACACTCCACTTGATTTAGTCTGTATTGTAGAGTCCTAATTTTTCACGGTATTCTAGCAAAATTTCATGAGTTAAGGGTCTCAAGGAAAAGTAAGGGCAGTCTTCAAACAAAATCCAATTCTACTAGATAATAATTCATTTTTCAACTATTCAACCATTTCCCCTTCGAGAATTTATGATTAAGGTCAAAAGTTTTGATGAGTTTTATATTCTCTCTCCATTTCCTTTTGTAGTTATATCTCTAGGTATTTAATGCTGATTGGAGTGGTTCTTATGAGCTCTAGGATCGCTTTACTTTTTAGACTTCTGTTGACTATAGTGAAAAGTGTCTTTCTTAAGTAGAGTATTGTTGGTGGTGCTAAAATCTGTAACCACTTGTACAAAGATCCCCTTTTACACTATATCCAACACTTATGGTTGACTAAGGGTTGTTGTTGGATTGTCTCGATTCTCCTTGATGAGAAATCATTCTTTGTTGTCTTAGCCTTTGTCTTCCGTTGTCGGGTTTTAGCTATGCTTTATCTGATAGGGATACTCTGGATGTCATCGATCTCCTATGGATGATTGGCGGCTTTTGATGCAACTTTGGGAGAAGGGATATTCATGTCTAGGATCCTAGTCCTTCTAAAGGGTTCTCATGTAAATATCAATATCTAGAGGGTTTGGGAGGCTCCTAAGTGAGGTGTGGTTATGTATTAGGTTCAATGTCTTTTTGTGGGTGTTTGGGACTAAATTTTTCTGTCTGTTAAGTATTATTTTGTTAGATTGGAGGCCATTTTTGTAGGTTGCCTCCTATTTTGTGCCCGTGTATTCTTTCATTCATAGAAAAAAGGATTGTTGTTTAGTCTTGCAACCTTTCTCTTTGTGTTCTTTTTCTCAAGCTTAGTTAGCGTTTAATTTTTCTGTTAAAGCTTTGGTTTGAAAGAGTTCAATGGTCTTTACCGGATAAAGCCTCTTCATTGGATTGCTCTCTTTGTATTAGCACGGGTTCAAGCCTATTCATGTTAGATCTAGATTGATTTTATTTCTCCTACTTAGTCATTTTCTCCTTTTCTTCTCTTTGTATTTGTTTTGGTAATTTTAGATAATTTTGTTTTTTGTTTCTTGTAATTTGAGTATTAGTTTCTTTTAATTTTATCGATGAAAAGTTGTTTCCTTTTTTGTTTTTTGTTTTTGTTTTTGTTTTTTTTAAAATGAAAAAAAAAGGATTGTTGTTGGATTGATGCCTTTAGTACGTTTTTTTTAATCTAAGAAGAAGTTCAGAGGATTTCTTTCCTTTGTCTTTCAGTTTGGTACATTGTGTGTTCAACCTATTTATGCATGTAACTTCCATGTTCAGGATAAAACAACTAGCAATAAGCTTTTGGATGGTTTGAAGTACAATGTTGAAGTGGCAGAAACTGTTGCTAATGAGGCGCAGGTGTGATATCATCTTTAGTTTTCACATCACATCACATCCCTCCCCCTTTCTCAGTCAAGTTTAAATTTCGGTTTCCTCTTTGATTTAACACTGAATCCAATTATTTCCTGTTAGCGTTTGCCAATATTGGAGGCAACACCATTATATGAGCAACTGCTGACGGTGTACCCCACTGCTGTGAGTTCCTTTCGTATTTCAATCTTTTTCTGTCTACCTTCACTTAGAGTAGCTGCATTTTGAAATTTGAACCTTGTTTATTGCTGGGTTTGTGAGCAGAAATAGAGTAACTATTTCATGGGCTCAGCTAATGCTGGTTAGTACTCCTTATATTTTTTTAGCATGTGACGATTATTCTTTTGACATTTTATATTCCTTTGAAAACTTAGGTGACAACCAAGTCTTGAAAATTAGATAGATTTTAGATTAATCAATTTTAATATCATTAGATGTAACTTAGAAAAATATCAAATAACTAATATTGCTTCTACCGAAATAATTATTTTTGGAACCAAGAGTGGTGTACACAGCAGAGTGGGGCAAGGTTGCGTATCCTCTCCCTCTAAATGCCAATAAGAATTATTATAATAAATATCTCCAACTGGCTTGAATTAGGAAAGGGAAATAATTAGAGAAGGATCTAGACAAGGACTGCCATGTAGCAGGAATGAAATACGCCAGTTGTTTAATTTTCTTCTGCCTGGCTGGTCATTCGGCACGTAAGAATCTTTGTCCATTGTGCTTGGTATGGTTGCATTTTGGTAGGTTGTAATTGCACAGATGATAGATGACAGAGATTGTTTCTTTGCAAATACTGTAATCTGAGATAGAATTAACAATTAAGGATTGCTTCAAAGAAGTTGTAGTAGCTTATGGATATTTATAGACTTTACAAACTGGATAGAATCAATGAGCGGTGTTGATTCTACGAGTGTTGCTTGTCTGTCTCTAAGCTTGAATTGGAGATGTGAGTATAATGTCATATCAATGGAAAGTTCATGATTTTCCTGTTTGGGGATGTATAAATCTTCCAATATCGTGTGTTCATGTTCTTTGTGTTTGTCTATGTGGACACGTTTTCCTACTTAATCACCTAATTTGTTAGTTTCTCAGCTGGTCTCACTCATACACGGAAAAGTAGTTCTTTCTTTTTAGTTGGATGTAACTCTATGTACTTTTAGATTCTATCAATGCGCTAACCATTTTCTTCAGGCAAAATATTGGAAGCAATACGTGGAGGCACACATGGTTGTAAATAATGACGATGCTACAAAACAGATATTTAGCCGATGCTTATTGAACTGTCTACACATCCCTCTTTGGTATGATTGTTGTTTCACTTTCACCTATTAGTCATTTTTTTGAAAAGAAAACAACGCTTTTCATTGATGAAAAGAGAAGGGACTAATGCTCAAATTACAATGAAACAAAGAAACAAAGAAACAAAAAATAGCAATTACAACCAACACAACCAAATACAACCAATGATAGCACTTGAAAAGAAATAGAAAACCTTTGATTTCGACTAAACAGAATGCTCCAAGAACAAAAGACACCATTTCAACCAATAACAAATCTTTGAACTGATGAGGCAGATGAAAACCTTAAGGCCTCAGGATGGGCATAACTTAATGCTAGAACCAAGATGCAAAATTCCACATAACACTCAAGAAAGTCTTGCTGTGAAAACTGAAGATATTCTTTCACAACTAACTTCAAAAGATGAACTAAAACTCTTGCAACAACTCTGGAAGAAGCCGAATCTGCACAAAGAGCAAGAATTAGTTATTAGTGGATGA ATGAAGCAATGGACTAAGCAGACCAGTATAACTTATACGATCACAACTCTATTCACACGCACTCTCTTCATTATGGCATCCGAGGGTTCTGAATCAAAGGATAAAACAACTAGCAATAAGCTTTTGGATGGTTTGAAGTACAATGTTGAAGTGGCAGAAACTGTTGCTAATGAGGCGCAGCGTTTGCCAATATTGGAGGCAACACCATTATATGAGCAACTGCTGACGGTGTACCCCACTGCTATGAAAACCTTAAGGCCTCAGGATGGGCATAACTTAATGCTAGAACCAAGATGCAAAATTCCACATAACACTCAAGAAAGTCTTGCTGTGAAAACTGAAGATATTCTTTCACAACTAACTTCAAAAGATGAACTAAAACTCTTGCAACAACTCTGGAAGAAGCCGAATCTGCACAAAGAGCAAGAATTAGTTATTAGTGGATGA ATGAAGCAATGGACTAAGCAGACCAGTATAACTTATACGATCACAACTCTATTCACACGCACTCTCTTCATTATGGCATCCGAGGGTTCTGAATCAAAGGATAAAACAACTAGCAATAAGCTTTTGGATGGTTTGAAGTACAATGTTGAAGTGGCAGAAACTGTTGCTAATGAGGCGCAGCGTTTGCCAATATTGGAGGCAACACCATTATATGAGCAACTGCTGACGGTGTACCCCACTGCTATGAAAACCTTAAGGCCTCAGGATGGGCATAACTTAATGCTAGAACCAAGATGCAAAATTCCACATAACACTCAAGAAAGTCTTGCTGTGAAAACTGAAGATATTCTTTCACAACTAACTTCAAAAGATGAACTAAAACTCTTGCAACAACTCTGGAAGAAGCCGAATCTGCACAAAGAGCAAGAATTAGTTATTAGTGGATGA MKQWTKQTSITYTITTLFTRTLFIMASEGSESKDKTTSNKLLDGLKYNVEVAETVANEAQRLPILEATPLYEQLLTVYPTAMKTLRPQDGHNLMLEPRCKIPHNTQESLAVKTEDILSQLTSKDELKLLQQLWKKPNLHKEQELVISG
BLAST of ClCG04G004810.1 vs. TrEMBL
Match: A0A0A0L2S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G593920 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.7e-21 Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. TrEMBL
Match: V7C004_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G051000g PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. TrEMBL
Match: I1N761_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G064500 PE=4 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-07 Identity = 38/92 (41.30%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. TrEMBL
Match: A0A0B2SPV0_GLYSO (Cleavage stimulation factor subunit 3 OS=Glycine soja GN=glysoja_046212 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-07 Identity = 38/92 (41.30%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. TrEMBL
Match: I3T6D8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-07 Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. TAIR10
Match: AT1G17760.1 (AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 48.1 bits (113), Expect = 5.3e-06 Identity = 31/90 (34.44%), Postives = 43/90 (47.78%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. NCBI nr
Match: gi|778695235|ref|XP_011653954.1| (PREDICTED: cleavage stimulation factor subunit 77 isoform X2 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. NCBI nr
Match: gi|778695232|ref|XP_011653953.1| (PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. NCBI nr
Match: gi|700199749|gb|KGN54907.1| (hypothetical protein Csa_4G593920 [Cucumis sativus]) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21 Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. NCBI nr
Match: gi|659082815|ref|XP_008442046.1| (PREDICTED: cleavage stimulation factor subunit 3 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of ClCG04G004810.1 vs. NCBI nr
Match: gi|1009163056|ref|XP_015899759.1| (PREDICTED: cleavage stimulation factor subunit 77 [Ziziphus jujuba]) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-08 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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