ClCG03G017560.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG03G017560.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 32649887 .. 32650715 (-)
Sequence length282
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGACTTGAAATTATGAAAGAAGGTTTGAGTATGACTAGAGAGAGACTTGTAATTGAAGGCTAGTAGTTAGTTGATTGGTTGAAAAATTAAGAGTTGTTAAAAGAAAGAGTTAGGTTAAGCAAAACTCCATATATTGCATGCTACCAATAATGGCTGGCCTACCTACATTTGACCAACCCAAATTAATGATTTATTCACATTTTTTTTCTTTTTATTTAAATATTATTTTGGTCCTTCATTTTAATTATTGTATTTCTAATTGTCTAAAAAATTAGTCTCCATAGTTGTTGTGTAACCCCTTCGAGTCAAATGTTGTAATGAGATGAAAGATGTGACTATTTGTTTAAATATATATTGACCATTATATCATGATATCATATCACACCAATACGAAAATATTATACCACTTTCACTACAACAAAAATAGGCTTCTATGACTCTAAAAAACAGTCATTACCACATTTGTTGACTCTTTTTTTTTAGTCATTTAATCGCCCATCATCTAAAGTGTATAGCGAGACGCCAGGACAAGCGATGGGCGAGAGGAGAGCGAGACGCCGGAGACACCCAAACGCGACAAAAACTTCGATTGGAGAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGATAGGCTACCGGATGTCGATTGGAGAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGAGAGGCTACCGGATGTCGACTGGAGAGGGAGATCGAGAGACGAAGACAGCGACACTCCGACAATGGTGGTCTGAGACGAACGTGAGGGAAGCTGTCGACGTGAATTCGAAATATTGA

mRNA sequence

ATGGCAAGACTTGAAATTATGAAAGAAGGTTTGAGTATGACTAGAGAGAGACTTAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGATAGGCTACCGGATGTCGATTGGAGAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGAGAGGCTACCGGATGTCGACTGGAGAGGGAGATCGAGAGACGAAGACAGCGACACTCCGACAATGGTGGTCTGAGACGAACGTGAGGGAAGCTGTCGACGTGAATTCGAAATATTGA

Coding sequence (CDS)

ATGGCAAGACTTGAAATTATGAAAGAAGGTTTGAGTATGACTAGAGAGAGACTTAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGATAGGCTACCGGATGTCGATTGGAGAGGGAGACCGAGAGACGAGGACAGCGAGACGCCAGGGAGACCGAGAGGCTACCGGATGTCGACTGGAGAGGGAGATCGAGAGACGAAGACAGCGACACTCCGACAATGGTGGTCTGAGACGAACGTGAGGGAAGCTGTCGACGTGAATTCGAAATATTGA

Protein sequence

MARLEIMKEGLSMTRERLRETERRGQRDARETDRLPDVDWRGRPRDEDSETPGRPRGYRMSTGEGDRETKTATLRQWWSETNVREAVDVNSKY
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG03G017560ClCG03G017560gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG03G017560.1ClCG03G017560.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G017560.1.cds2ClCG03G017560.1.cds2CDS
ClCG03G017560.1.cds1ClCG03G017560.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 1..24
scor