ClCG03G016750.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G016750.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Gamma-tubulin complex component 2
Location	CG_Chr03 : 31909221 .. 31913440 (+)
Sequence length	585

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCGTAACACCCTAATTTTATTTATTTATTTATTTTCACTCTTACTAAGTTTAAAGTTTTAGCTTCATTCATGACATTCAATTTTGCAGTGTTATTTCTTATTTCTTTTTAATTTTTGTCACATATGAGAGTTCAAATGAACCATCATAGATTGACTTAGTAGGAAATATGGAGTATGACCTTAATAAAGGGCCAAGAAATTATGAATTCAATCTATGGCGGTCACCTACTTAGAATTTAATATCCTATAAGGGTTTTCTTGATACCGAAATGTTGTAGGGCTAAACGAATTATCCCATAAAATAAGAACTAAGAAACGAAACAATACTAAACTTCGAAACTTCAAATTGATATCTATGCATGTCCGGGCCAACTTTGAGAATCAAGATTCATCTTTTGTCTATCATTCTTTTATTCATGTCAATTAAAATGAGGAAAATAGTAAGCTTTCCTTGACAAAGAAGAAACCTGAACTCCTTAAATAGAAACTTTAAATCAATACAACCATCAATGGTAGGTAAGAATATTATCTGCTGAATAACATGAATCATAGTTAGATGCTTTAATATCAAGAGATTCTGTCCCTCAGTTGTTTGTAAAATGAGCATTCAAAAAAACAAAGTTGACAATTTAGATCCTTGGCTTTGAAGTTCTACTTCTTCTACCAAAGTCAACTATTATTATAACTGCCACTGAGGCATGAATGTTTGTTATGATAAATTTGAATTTTCTTAGGATTATTCCAAATCATCAAATCCCATTTTAAGGAACTAGAAAGTTCAACCAATATAGGTTGTTTTCTTTATAGGTTTTTGCAAATGAAGAATTAGCAACAAAGCCAGTTGTCAAGCAAATATAATAAATTAGGCCTTGGGAATTTGGAGAAATGGGTAAATTAATCACAATCAAGTTAAGTAAATACTGTCCAAGACTGCAAATCCAGCTGCAACACCACCCTCATTTGATGAAGATACTTTTGTCCTCATCAAGTAACCACGGTTGTCATTTACAATTACTTTGTCCTTGTTCCTGCATATGAAATTCAAAAGTAAAAAAAACTACCTCCTTACCTGAGATTAAAAAAAAAAAAAAAAAAAGATCCAAGCATAGCTCTATCTACAATGAACTAATTACCATACCAAGGGTCAATGATTTGGTCTCCACCCACAATATAATTGTTAAACAAAGAGTAAGATGATGCATAAAGAAAAAGGCTTGAGATAAAATACACTAGTTCAGATTTTTGTATCATTCGTGTAAGCGGTTTAGTTTCCCGAAAAGAATTGACAACAAAATTAACTATTTTTTAAAAGTTCAACNTTTTGGTTTTTGAAAATTATGATTATTAGAGACATATTTTCACTTATTGATTTGTTTATTTTGTCATCCACTTTTTAGGTGTGTTTTCAAACTCCAAGTAAAACTTTAAAAATTAAAGATGTAGACTTTGTTTGGTAATCAATTAGTTTTTTAAATTTAGTTATTGAACATTAAGCTTATAAACATATTTCTATCTATAATAATAATTATTATTAGGGATATTTTTAAAAATAGAAAATCTATTTAAGATAATTACAAATATAACAAAATTTTACTTTTTATCTGTGATAAACTACGATAGACCAAATAGACATCTATCGATAGATGTCTATTTGGGTCTATCGCGATCTATCGCAAATAGAAAGTAAAATTTTGCTATATTTGTAAATAGTTTGATATTTTTCTATTTATAATAATTCCTAATTATTATTATTATTATTATTTTACTTTCCACTATCTTTTTTAAAAACCAAGCCAAATTTTGAGAAGTAAAAAATATAGTTTTAAAAAAGGAAAATTATTATAAATAGAAAAAATATCAAACTATTTACAAATATAACAAAATTTCACTGTCTGTCTATGATAGATTGCGATAGACTTCTATCGCCCGCGCTTTATCGCTCAAGCAAAAAAATCTACTACAGTCAATTGCTGGTAGACAATGAAATTTTTTTATATTTGTAAATAGTTTAACTCATTTTGCTATATTTGAAAACATCCCTTTCAAAAATTTGTTTTTGTTTACCATTTTGACTAAGAATTTAAGCATTTATTAAAAAAAAAATGTGAGAAAACTATAGAATGGAATTGGAAAAACAAGCTTAAGTTTCAAAAACAGAAAACTCAAAATAAAAAAAAATAAAAAAAAAAAGAAAGATTGTTCCAAATGGGTCAGTTTTTTTAACTTTTTTTTCTTTTGAAATTTAACTTAGAATTGGAGTGTTTGGTTAGGGAATATGACTTTGAAAAATTTTGGAAAATATGTATTCTGTTTTTAAATTTTTTTTTTTTTAAATCCTTCCTATATTGAAAATATGTTAAAGTATCATGGTTTATGTATTTTGAATTTATTTTATCAATCTCTCTATAATTTCGAATACTCAAAATTGAGCATTTATATAGTTTCAATAGGGTCAATTTACAAATTTGGTCTATATAGTTTGGAGAAAGTTAGTAAGAATTTAATCCCTATAGTTTTAAAAGTTAAATTTTAGTCCTTATGGTTTGATTAAATCTCATAATTAGTACCTACGGTTTGATAAAATCCTCATAAATAGTCCCGTGAGTTTTATCAAAACATATGAACTAAAATTCTAACTTTCTCTAAATCATATGAACCAAAATTTGTGATTTAAACTTTCAATAAATGTTATAATTATAAACAACACCGAGATGGTACAAGGACTAAAATAGAAGAAGTCCTAACATACAATAGGGACTAAATTGTTACATATGAACAACTCTCAAACACTAATACAAATTACATTTGTGTGGATTTTTCGATGATTTAGAGATTGATCCAGAAATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCGTAACACCCTAATTTTATTTATTTATTTATTTTCACTCTTACTAAGTTTAAAGTTTTAGCTTCATTCATGACATTCAATTTTGCAGTGTTATTTCTTATTTCTTTTTAATTTTTGTCACATATGAGAGTTCAAATGAACCATCATAGATTGACTTAGTAGGAAATATGGAGTATGACCTTAATAAAGGGCCAAGAAATTATGAATTCAATCTATGGCGGTCACCTACTTAGAATTTAATATCCTATAAGGGTTTTCTTGATACCGAAATGTTGTAGGGCTAAACGAATTATCCCATAAAATAAGAACTAAGAAACGAAACAATACTAAACTTCGAAACTTCAAATTGATATCTATGCATGTCCGGGCCAACTTTGAGAATCAAGATTCATCTTTTGTCTATCATTCTTTTATTCATGTCAATTAAAATGAGGAAAATAGTAAGCTTTCCTTGACAAAGAAGAAACCTGAACTCCTTAAATAGAAACTTTAAATCAATACAACCATCAATGGTAGGTAAGAATATTATCTGCTGAATAACATGAATCATAGTTAGATGCTTTAATATCAAGAGATTCTGTCCCTCAGTTGTTTGTAAAATGAGCATTCAAAAAAACAAAGTTGACAATTTAGATCCTTGGCTTTGAAGTTCTACTTCTTCTACCAAAGTCAACTATTATTATAACTGCCACTGAGGCATGAATGTTTGTTATGATAAATTTGAATTTTCTTAGGATTATTCCAAATCATCAAATCCCATTTTAAGGAACTAGAAAGTTCAACCAATATAGGTTGTTTTCTTTATAGGTTTTTGCAAATGAAGAATTAGCAACAAAGCCAGTTGTCAAGCAAATATAA

mRNA sequence

ATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCATTGATCCAGAAATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCGTTTTTGCAAATGAAGAATTAGCAACAAAGCCAGTTGTCAAGCAAATATAA

Coding sequence (CDS)

ATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCATTGATCCAGAAATGATAGAGGAACTAAGGAAAGACAGAGCAACTCTAATAAAAGAAGAGCTTGATTTACTAAAGATAGTGAGTGAAGAGAATATGAAACGCTATAAATCATTGATGGAAGATGCAAAGAAATCTTCATCTCAATATCGAAAAGAAGCAGAAAATTGCAACATTGGGGTTAGGACTTGTGAGCAAGCAAGAGAGAGAGCTCAACAAAAGCTTGTTGAAGAACGCAAACTCACTGCTTTATGGCAAAAAAGAGCTGAAATGCTCGTTTTTGCAAATGAAGAATTAGCAACAAAGCCAGTTGTCAAGCAAATATAA

Protein sequence

MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQARERAQQKLVEERKLTALWQKRAEMLIDPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQARERAQQKLVEERKLTALWQKRAEMLVFANEELATKPVVKQI

Homology

[Close]

BLAST of ClCG03G016750.1 vs. TrEMBL
Match: A0A0A0M1L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1


Query: 1  MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCE 60
          MI+ELRKDRATLI EELDLL IV++ENMKRYKSL+ +AKK SSQY+KEAENC   VRTCE
Sbjct: 1  MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 61 QARERAQQKLVEERKLTALWQKRAEMLIDP 91
          +ARERAQ+KLVEE KLTALWQKRAEML  P
Sbjct: 61 EARERAQEKLVEECKLTALWQKRAEMLAKP 90

[Close]

BLAST of ClCG03G016750.1 vs. TrEMBL
Match: A0A0A0M1L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.5e-30
Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 1


Query: 92  MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCE 151
           MI+ELRKDRATLI EELDLL IV++ENMKRYKSL+ +AKK SSQY+KEAENC   VRTCE
Sbjct: 1   MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 152 QARERAQQKLVEERKLTALWQKRAEML 179
           +ARERAQ+KLVEE KLTALWQKRAEML
Sbjct: 61  EARERAQEKLVEECKLTALWQKRAEML 87

HSP 2 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 47/87 (54.02%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP + EE+ K   T++ EEL+L K+V+ E+++  K L+ DA+K+ SQY+KEAE CNIG+ 
Sbjct: 84  DPVLNEEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGME 143

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+AR+RA+ +L+EER+LTALW+ RA
Sbjct: 144 TCEEARQRAEAELIEERRLTALWENRA 170

[Close]

BLAST of ClCG03G016750.1 vs. TrEMBL
Match: V7BPV4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G094800g PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18
Identity = 45/82 (54.88%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ K   T++ EEL+L K+V+ E+++  K L+ DA+K+ SQY+KEAE CNIG+ TCE+A
Sbjct: 89  EEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           R+RA+ +L+EER+LTALW+ RA
Sbjct: 149 RQRAEAELIEERRLTALWENRA 170

HSP 2 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 46/87 (52.87%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP + EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ 
Sbjct: 84  DPVLNEEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGME 143

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+AR+RA+ +L+EER+LT +W+ RA
Sbjct: 144 TCEEARQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of ClCG03G016750.1 vs. TrEMBL
Match: A0A0L9VCU8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g155000 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18
Identity = 44/82 (53.66%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ TCE+A
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           R+RA+ +L+EER+LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

HSP 2 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 46/87 (52.87%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP + EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ 
Sbjct: 84  DPVLNEEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGME 143

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+AR+RA+ +L+EER+LT +W+ RA
Sbjct: 144 TCEEARQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of ClCG03G016750.1 vs. TrEMBL
Match: A0A0S3S5E9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G147400 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18
Identity = 44/82 (53.66%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ TCE+A
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           R+RA+ +L+EER+LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

HSP 2 Score: 104.4 bits (259), Expect = 1.6e-19
Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP++ +EL KD   L+ EE+ L KIVS+E M R  +L  DAK++SS Y+KEAE CN GV 
Sbjct: 82  DPDLNQELEKDTVALLSEEIALQKIVSKETMDRTSALTMDAKRASSHYQKEAEKCNAGVE 141

Query: 149 TCEQARERAQQKLVEERKLTALWQKRAEMLVFANEELA 187
           TCE+ARE A+ +L EE KLTALW++RA  L + + + A
Sbjct: 142 TCEEAREWAEAQLREELKLTALWEQRARQLGWKDRKRA 179

[Close]

BLAST of ClCG03G016750.1 vs. TAIR10
Match: AT2G32580.1 (AT2G32580.1 Protein of unknown function (DUF1068))

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DPE+ E+  K+ A L+ EEL   +  S E  KR  + + +AKK +S Y+KEA+ CN G+ 
Sbjct: 74  DPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEADKCNSGME 133

Query: 149 TCEQARERAQQKLVEERKLTALWQKRAEMLVFANEELATKPVVK 193
           TCE+ARE+A++ LVE++KLT++W++RA    +  ++ ATK  VK
Sbjct: 134 TCEEAREKAEKALVEQKKLTSMWEQRARQKGY--KDGATKSTVK 175

HSP 2 Score: 81.3 bits (199), Expect = 7.4e-16
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           E+  K+ A L+ EEL   +  S E  KR  + + +AKK +S Y+KEA+ CN G+ TCE+A
Sbjct: 79  EDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEADKCNSGMETCEEA 138

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           RE+A++ LVE++KLT++W++RA
Sbjct: 139 REKAEKALVEQKKLTSMWEQRA 160

[Close]

BLAST of ClCG03G016750.1 vs. TAIR10
Match: AT2G24290.1 (AT2G24290.1 Protein of unknown function (DUF1068))

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DPE+ EE+ K    L+ EEL L + V++E+ +     + +AK+ +SQY+KEAE CN    
Sbjct: 79  DPELKEEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATE 138

Query: 149 TCEQARERAQQKLVEERKLTALWQKRAEMLVFANE 184
            CE ARERAQ  L++ERK+T LW++RA  L +  E
Sbjct: 139 ICESARERAQALLLKERKITFLWERRARQLGWEGE 173

HSP 2 Score: 82.0 bits (201), Expect = 4.4e-16
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ K    L+ EEL L + V++E+ +     + +AK+ +SQY+KEAE CN     CE A
Sbjct: 84  EEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESA 143

Query: 63  RERAQQKLVEERKLTALWQKRAEML 88
           RERAQ  L++ERK+T LW++RA  L
Sbjct: 144 RERAQALLLKERKITFLWERRARQL 168

[Close]

BLAST of ClCG03G016750.1 vs. TAIR10
Match: AT4G30996.1 (AT4G30996.1 Protein of unknown function (DUF1068))

HSP 1 Score: 88.2 bits (217), Expect = 6.1e-18
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DPE+ +E+ K    L+ EEL L + V++E+ +     + +AK+ +SQY+KEAE CN    
Sbjct: 78  DPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATE 137

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
            CE ARERA+  L++ERK+T+LW+KRA
Sbjct: 138 ICESARERAEALLIKERKITSLWEKRA 164

HSP 2 Score: 81.6 bits (200), Expect = 5.7e-16
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           +E+ K    L+ EEL L + V++E+ +     + +AK+ +SQY+KEAE CN     CE A
Sbjct: 83  QEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESA 142

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           RERA+  L++ERK+T+LW+KRA
Sbjct: 143 RERAEALLIKERKITSLWEKRA 164

[Close]

BLAST of ClCG03G016750.1 vs. TAIR10
Match: AT1G05070.1 (AT1G05070.1 Protein of unknown function (DUF1068))

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 47/104 (45.19%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DPE+ E+  K+ A L+ EEL L +  S E  KR    + +AKK +S Y+KEA+ CN G+ 
Sbjct: 75  DPEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQKEADKCNSGME 134

Query: 149 TCEQARERAQQKLVEERKLTALWQKRAEMLVFANEELATKPVVK 193
           TCE+ARE+A+  L E++KLT+ W++RA    +   E +TKP VK
Sbjct: 135 TCEEAREKAELALAEQKKLTSRWEERARQKGW--REGSTKPNVK 176

HSP 2 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           E+  K+ A L+ EEL L +  S E  KR    + +AKK +S Y+KEA+ CN G+ TCE+A
Sbjct: 80  EDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQKEADKCNSGMETCEEA 139

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           RE+A+  L E++KLT+ W++RA
Sbjct: 140 REKAELALAEQKKLTSRWEERA 161

[Close]

BLAST of ClCG03G016750.1 vs. TAIR10
Match: AT4G04360.1 (AT4G04360.1 Protein of unknown function (DUF1068))

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE       ++ EEL L +  ++E+  R   L+ DAKK++SQY+KEA+ C++G+ TCE A
Sbjct: 80  EESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKCSMGMETCELA 139

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           RE+A+  L E+R+L+ +W+ RA
Sbjct: 140 REKAEAALDEQRRLSYMWELRA 161

HSP 2 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1


Query: 94  EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 153
           EE       ++ EEL L +  ++E+  R   L+ DAKK++SQY+KEA+ C++G+ TCE A
Sbjct: 80  EESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKCSMGMETCELA 139

Query: 154 RERAQQKLVEERKLTALWQKRA 176
           RE+A+  L E+R+L+ +W+ RA
Sbjct: 140 REKAEAALDEQRRLSYMWELRA 161

[Close]

BLAST of ClCG03G016750.1 vs. NCBI nr
Match: gi|700211010|gb|KGN66106.1| (hypothetical protein Csa_1G571290 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1


Query: 1  MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCE 60
          MI+ELRKDRATLI EELDLL IV++ENMKRYKSL+ +AKK SSQY+KEAENC   VRTCE
Sbjct: 1  MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 61 QARERAQQKLVEERKLTALWQKRAEMLIDP 91
          +ARERAQ+KLVEE KLTALWQKRAEML  P
Sbjct: 61 EARERAQEKLVEECKLTALWQKRAEMLAKP 90

[Close]

BLAST of ClCG03G016750.1 vs. NCBI nr
Match: gi|700211010|gb|KGN66106.1| (hypothetical protein Csa_1G571290 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 6.5e-30
Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 1


Query: 92  MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCE 151
           MI+ELRKDRATLI EELDLL IV++ENMKRYKSL+ +AKK SSQY+KEAENC   VRTCE
Sbjct: 1   MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 152 QARERAQQKLVEERKLTALWQKRAEML 179
           +ARERAQ+KLVEE KLTALWQKRAEML
Sbjct: 61  EARERAQEKLVEECKLTALWQKRAEML 87

HSP 2 Score: 105.9 bits (263), Expect = 8.0e-20
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DPEM  E+ KD  TL+ EE+ L K VSE+N+   K+L+ DA+KSSSQY+KEAE CN G+ 
Sbjct: 76  DPEMNAEMTKDIITLLTEEISLHKSVSEDNLAHTKALIMDARKSSSQYQKEAEKCNTGME 135

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+ARE+A   L EERKL+ALW+ RA
Sbjct: 136 TCEEAREKAGAALSEERKLSALWENRA 162

[Close]

BLAST of ClCG03G016750.1 vs. NCBI nr
Match: gi|1021024043|gb|KZM81831.1| (hypothetical protein DCAR_029444 [Daucus carota subsp. sativus])

HSP 1 Score: 99.0 bits (245), Expect = 9.8e-18
Identity = 49/84 (58.33%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1   MIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCE 60
           M  E+ KD  TL+ EE+ L K VSE+N+   K+L+ DA+KSSSQY+KEAE CN G+ TCE
Sbjct: 79  MNAEMTKDIITLLTEEISLHKSVSEDNLAHTKALIMDARKSSSQYQKEAEKCNTGMETCE 138

Query: 61  QARERAQQKLVEERKLTALWQKRA 85
           +ARE+A   L EERKL+ALW+ RA
Sbjct: 139 EAREKAGAALSEERKLSALWENRA 162

HSP 2 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 46/87 (52.87%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP + EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ 
Sbjct: 84  DPVLNEEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGME 143

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+AR+RA+ +L+EER+LT +W+ RA
Sbjct: 144 TCEEARQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of ClCG03G016750.1 vs. NCBI nr
Match: gi|920711642|gb|KOM52891.1| (hypothetical protein LR48_Vigan09g155000 [Vigna angularis])

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-18
Identity = 44/82 (53.66%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ KD   ++ EEL+L K+V++E+++  K L+ DA+KS SQY+KEAE CNIG+ TCE+A
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           R+RA+ +L+EER+LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

HSP 2 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 47/87 (54.02%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP + EE+ K   T++ EEL+L K+V+ E+++  K L+ DA+K+ SQY+KEAE CNIG+ 
Sbjct: 84  DPVLNEEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGME 143

Query: 149 TCEQARERAQQKLVEERKLTALWQKRA 176
           TCE+AR+RA+ +L+EER+LTALW+ RA
Sbjct: 144 TCEEARQRAEAELIEERRLTALWENRA 170

[Close]

BLAST of ClCG03G016750.1 vs. NCBI nr
Match: gi|593693078|ref|XP_007147081.1| (hypothetical protein PHAVU_006G094800g [Phaseolus vulgaris])

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-18
Identity = 45/82 (54.88%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 3   EELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVRTCEQA 62
           EE+ K   T++ EEL+L K+V+ E+++  K L+ DA+K+ SQY+KEAE CNIG+ TCE+A
Sbjct: 89  EEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQQKLVEERKLTALWQKRA 85
           R+RA+ +L+EER+LTALW+ RA
Sbjct: 149 RQRAEAELIEERRLTALWENRA 170

HSP 2 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 1


Query: 89  DPEMIEELRKDRATLIKEELDLLKIVSEENMKRYKSLMEDAKKSSSQYRKEAENCNIGVR 148
           DP++ +EL KD   L+ EE+ L KIVS+E M R  +L  DAK++SS Y+KEAE CN GV 
Sbjct: 82  DPDLNQELEKDTVALLSEEIALQKIVSKETMDRTSALTMDAKRASSHYQKEAEKCNAGVE 141

Query: 149 TCEQARERAQQKLVEERKLTALWQKRAEMLVFANEELA 187
           TCE+ARE A+ +L EE KLTALW++RA  L + + + A
Sbjct: 142 TCEEAREWAEAQLREELKLTALWEQRARQLGWKDRKRA 179

The following BLAST results are available for this feature:

BLAST of ClCG03G016750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1L2_CUCSA	1.2e-30	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1	[more]
A0A0A0M1L2_CUCSA	4.5e-30	81.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1	[more]
V7BPV4_PHAVU	1.8e-18	54.88	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G094800g PE=4 SV=1	[more]
A0A0L9VCU8_PHAAN	1.8e-18	53.66	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g155000 PE=4 SV=1	[more]
A0A0S3S5E9_PHAAN	1.8e-18	53.66	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G147400 PE=...	[more]

BLAST of ClCG03G016750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32580.1	2.1e-18	44.23	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	2.7e-18	45.26	Protein of unknown function (DUF1068)	[more]
AT4G30996.1	6.1e-18	45.98	Protein of unknown function (DUF1068)	[more]
AT1G05070.1	2.3e-17	45.19	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	1.5e-13	42.68	Protein of unknown function (DUF1068)	[more]

BLAST of ClCG03G016750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700211010\|gb\|KGN66106.1\|	1.7e-30	80.00	hypothetical protein Csa_1G571290 [Cucumis sativus]	[more]
gi\|700211010\|gb\|KGN66106.1\|	6.5e-30	81.61	hypothetical protein Csa_1G571290 [Cucumis sativus]	[more]
gi\|1021024043\|gb\|KZM81831.1\|	9.8e-18	58.33	hypothetical protein DCAR_029444 [Daucus carota subsp. sativus]	[more]
gi\|920711642\|gb\|KOM52891.1\|	2.6e-18	53.66	hypothetical protein LR48_Vigan09g155000 [Vigna angularis]	[more]
gi\|593693078\|ref\|XP_007147081.1\|	2.6e-18	54.88	hypothetical protein PHAVU_006G094800g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG03G016750	ClCG03G016750	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG03G016750.1	ClCG03G016750.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G016750.1.cds1	ClCG03G016750.1.cds1	CDS
ClCG03G016750.1.cds2	ClCG03G016750.1.cds2	CDS
ClCG03G016750.1.cds3	ClCG03G016750.1.cds3	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 89..178 score: 2.5E-27coord: 3..85 score: 1.0
None	No IPR available	unknown	Coil	Coil	coord: 28..48 score: -coord: 147..167 score: -coord: 119..139 score: -coord: 56..76 scor
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 89..178 score: 8.7
None	No IPR available	PANTHER	PTHR32254:SF6	SUBFAMILY NOT NAMED	coord: 89..178 score: 8.7