ClCG03G013630.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCTTTCTTCTGCCCTTCCTCATCGATCTCCTTCTCTGTCACGGCGGCGAGGCGTGCCAGATCAGAAACCAGCGGCTTAGCGACCTCGCCCACGGCGGAGAGCAGCGGCTCTGCGGGAGGGCATCCCCGGTCCCTATCCGCATTGACGCCGAAATACAGAGGCACAGGTAAGCTCGCTACCAAGGCAGAAAGAGAAAGCGTAGTACTTCTATGTGTTGAGTTTATTTCAATTGGGTTCCTTCGTTTGTTTCTTTGTTCAAATGAGCTAATTCGAGAGGGAGATGGAGATTAGAAGGCAGAGTAGTATGAATCTGTGTAGAAATTGATGAAATGTGTGTAATATTATCTGATTTTGATTGCTAATGGCTGATGAATCAACCATTAGGCGAGGAAAAGGAAATTCAGAGCCACGAATCAAGAGGAAACTCTGATTTGAGCGCGCGGATCGTTGAAATTTCGAGTTTCTCCCCTTTATTTTCGTTACCCATGATTCTTTTACCCAATTTGGTTTTACCCACTTCGTCTTGGTGTTGGATATGGAGCTTGAAAGATTTCAAATAAGGACTACGACTAACGAGATAAATTCACATAGGTTTTAAGGACAATTGCAAATATAGCAAATAAACCGAGCTCTTGGAGTCTATAGCCAGTAGCTAATAGATTTTGCTATACACTTAATTATTAGCCCTATTAGTATTACCCATTGTAATTACCTAGATTTTAGGTTGGGGTATTTATCTGAGTCTATAATGACTATGCAAATCCAACTGCACTTTCTTTGGCTTTTTTCGTAAAAATTGCTACTAGTTTCCTTCCAATAAGGATGCAATAGTTCTGGATTTGGATGTCTCTTTTTTTTAACAGCTTTTTAATTCAAGTGTTCCCACAATTACTCATTGTTACATGCTTTGGTTCCATTTTGTTTGTATTATAGTTTTTTTTCATCTTTTGTTGCATGTTCTTGATGTTAGAATGTTTTCATGAAAAAAATGATTTTAGTGACTTGTATAGTAACAGATTAGGATTTTGAGAAAAATAACTCATTTTAATATTTTCTAGAGCATTTTGGACCCAAAATTTAATCAAACTCACCATCCATTCAACCAAGGTTTCCTTAATTTTTATCTATGTAGTTGCAAAATTATCTTTATTCGGTTTTGTTGTTGAGTATGCAAAGTTATCTTCTTTTTTTATTTTTATTTTTTTAATTTTTTTTTTATCAACTATAGTTGCAAAATGAAAATGGTTCAGGTAGCTAACAAGCAAATTTGTGTTTTTAGAACTCAAGATCAACACTTGTACAACCTAAGATTGTAAGAGTGAATTATATTCTCATTTATGAAAAAACTACTTGAATTTATTTATTCACCTTAAACTCATTCAATACAAAACATAGAGACAAAGTTTGCCACTTAAAGGACGACTACATTTAAGTGGAAATTATGAGGCAAAAACCTATATTAAGGAAATACTAACAGTAAATTATTTACATCAATAGAAACGTTTTTAAGCTTTAGAAGGAAAGAAATAAATGACCAAGAAATAATGGCCAAGGAAGATGCCCTGACACTGAGTGTAACTGACAGCATCTGAACAATGACAACCTTGTGTGCGTTCGTAGAATCTCTTCTAAATTGATTTTCCAAATTGATGACTATAATTTAGAGAGGAGCTGATTAATTGGTCATTGATTATGCTGAGGTTGTTCTGATTATGAGTAGCTGTTCGTAATTGGTCATTTAGGCCATTAATTTTTTTTTTTTACGGCAGCTGATTGACCTTAATACACTATCTTTGGGTGATACTGCTGCCCAAATATGTAGGGATTTGGTTGCATCGTAGTGAGTTGTTGTGGTGTTGAATCAATCTATTTTCTGTTGCTTTGTTTGTTGAAAACAATAAATATCTCTAGACTTCTTTGTAATAAAAGTTGTGAGAACTTGTATGTTTATATGTTTTTAGAACTTCGCGAGAATGTTAATTAATGCGTGGATTTGAGGGATTTCTAAGTAGGCAATATATTTTAAAATGTGCATCAAGCATACCTATGTTCAACCTATGCCTAGGAATTATTCTATTCTTCCTTTCTTTGCTAATTTTCAAATTGCAGTTTTTGTCTATTTTCATGGTACTTTTGAGAATTAATGTCTAGAATTTGATTGATAACTACAGAAAAATAGCAAAAAAGAGGTATCCTTGTGAGGAATTTGGTCCGAGATGTTTCTGTCTCTGGGTCATGTGTCCTATATGAGAAGAGAATTACTGAACTCCTCAAGGTTGGAAAGGACAAGAAAGCACTATAGCTAAGAGAAAGTTGGAAACTCACAAAGAACTTAAAGAGCTAAGTAAGAAGTGAGAACATGGCCAACCTTCCCTGCAATATGAGGTACTACTAGCTAGATGACTTTCACTTTCCCTCATTATGACTGAATCTTTTATCCTTAGTCAATTTTGACATCCTATTACCGATACTTCTATAAGACCCCCAGTTGGAGAAATATTAGGATTATTAGTATTATTTTTAGAAGGGACATATCAGTAATTAGATAGTAAGTTTGTTAGGGCTTTCCGTTATAAATAGAGGGAGAGAGTAGCCCTCTCGAAGGGCTAGGTTATTTTGTTACTTTTCTTATATTATTACAAGATATTTCCATATATTTCCACATTTGAATGTTCTTGAGTTTTCTGTGTTCTTGAATGTTCTTGTTAGGAGGTATCCTAACAAGTTCATGTAATTACCTTTTTCCCACATAACAATACTAGCTTCTTTGACCTTTTTTTTTTTACAAATCTGGTGGAGGGGAGGGGTGAGAAAAGAAGAAATGAAACTTGTGTGGTTAATTTTGAATAGCTCTCCGTATTAGTCGTAGGAAAGATTTGAAATAACTATAATAGATATGCTAATGAATTTGTGATAGTTTTAAACAGTCAAATTTGATGGAGTTCTATATCTTAAACGTTTAATTTAAAAAGAATATCTTCAATAGTGCATGGCTATATAGCACGATAGTTTTGTTAAAGCATCTCATATTTATACAATTGTTGCACTCTTAATCGAGATCTTAAAGTTCTCAACCATTTCTTGATTAATATTATATTGTTTTCCTTCCTGCAGATTATTTGCTAAAAGAATATACTCATGTTGAGATGGTTCGATGCTGTTAACTTAGCCATTTGTGAATGAAACCTTGCTATTGCAAGTTGTTTAGTTGGTTGTTGTTTGCAGGTGTGGATCTACTTCAATTCTTGAAGCAATTCATTTTGCTCTCCCTTCAAGTGCACCCTCAGAAGCAATCTCAACAATCAAAGCATTGTAGAGAGGTAAATTTCAAATACTTCACAGATAACTGAATCTGAATCCCTGAAATCCGCCCTCCTGTGTCTATATAAACTTTGGTTCCATTTTGATTCCAAACCATAGATATTAAGAACTTACTTAAGTGTTAGAATCATTTCTCTAACCCTTTAAAATAGGGAATGAGATTCCCACGAACTCTGAAGATATGGAAAATGGGGATTGTCAATTACAAAGATGCACTCCATCTACAAGAGAAACTTGTCTCTGCTAGAAAAGCTAGTAAAATCCCAGACACTCTCTTGTCTCTACAACATCCACCCACGTACACGCTTGGAAAAAGGCGAACTGATCATAATCTGTTAATCCCCGAGTCTGATCTGGAGAAGCTAGGAGCTGAACTTCACTACACTGAGAGAGGGGGAGACATTACATTTCATGGTCCAAATCAATCCATCTTGTATCCAATAATTTCCCTTAGAGATATTGGATTTGGGGCTAGAAAGTATGTGGAGAAACTAGAACTGACCATGATTGAGATGGCATGTTTGTATGGAGTGAAAGCTAGAGCTGGGGAGAAGGGGGAAACAGGAGTTTGGGTTGGAGATAGGAAGATTGGAGCCATTGGAGTTAGAATTTCAAACGGGATTACTTCTCATGGTTTAGCTTTCAATGTGGATCCTGATTTGAGGTATTTTAAGCATATTGTACCTTGTGGGATTGCTGATAAAGATGTGACATCTTTGACAAAAGAGACTGAGGAAGTGCTTCCTAGTGAAGAAGTTGTGGAGGAGCAGTTGATTTCTTGTTTTGTTAAGTTATTTGGTTATAGTAAAACTCAGGTGGAGAAGAATCCTACCACTGAATTAGGTTTTGGGGATGGGATTGAGAATTTCAAATAACTTTTTAGTTATGTAACTTAATTTTTTTTTCAATAATACTTCGAA CAGCTTTCTTCTGCCCTTCCTCATCGATCTCCTTCTCTGTCACGGCGGCGAGGCGTGCCAGATCAGAAACCAGCGGCTTAGCGACCTCGCCCACGGCGGAGAGCAGCGGCTCTGCGGGAGGGCATCCCCGGTCCCTATCCGCATTGACGCCGAAATACAGAGGCACAGATTATTTGCTAAAAGAATATACTCATGTTGAGATGGTGTGGATCTACTTCAATTCTTGAAGCAATTCATTTTGCTCTCCCTTCAAGTGCACCCTCAGAAGCAATCTCAACAATCAAAGCATTGTAGAGAGATGAGATTCCCACGAACTCTGAAGATATGGAAAATGGGGATTGTCAATTACAAAGATGCACTCCATCTACAAGAGAAACTTGTCTCTGCTAGAAAAGCTAGTAAAATCCCAGACACTCTCTTGTCTCTACAACATCCACCCACGTACACGCTTGGAAAAAGGCGAACTGATCATAATCTGTTAATCCCCGAGTCTGATCTGGAGAAGCTAGGAGCTGAACTTCACTACACTGAGAGAGGGGGAGACATTACATTTCATGGTCCAAATCAATCCATCTTGTATCCAATAATTTCCCTTAGAGATATTGGATTTGGGGCTAGAAAGTATGTGGAGAAACTAGAACTGACCATGATTGAGATGGCATGTTTGTATGGAGTGAAAGCTAGAGCTGGGGAGAAGGGGGAAACAGGAGTTTGGGTTGGAGATAGGAAGATTGGAGCCATTGGAGTTAGAATTTCAAACGGGATTACTTCTCATGGTTTAGCTTTCAATGTGGATCCTGATTTGAGGTATTTTAAGCATATTGTACCTTGTGGGATTGCTGATAAAGATGTGACATCTTTGACAAAAGAGACTGAGGAAGTGCTTCCTAGTGAAGAAGTTGTGGAGGAGCAGTTGATTTCTTGTTTTGTTAAGTTATTTGGTTATAGTAAAACTCAGGTGGAGAAGAATCCTACCACTGAATTAGGTTTTGGGGATGGGATTGAGAATTTCAAATAACTTTTTAGTTATGTAACTTAATTTTTTTTTCAATAATACTTCGAA ATGAGATTCCCACGAACTCTGAAGATATGGAAAATGGGGATTGTCAATTACAAAGATGCACTCCATCTACAAGAGAAACTTGTCTCTGCTAGAAAAGCTAGTAAAATCCCAGACACTCTCTTGTCTCTACAACATCCACCCACGTACACGCTTGGAAAAAGGCGAACTGATCATAATCTGTTAATCCCCGAGTCTGATCTGGAGAAGCTAGGAGCTGAACTTCACTACACTGAGAGAGGGGGAGACATTACATTTCATGGTCCAAATCAATCCATCTTGTATCCAATAATTTCCCTTAGAGATATTGGATTTGGGGCTAGAAAGTATGTGGAGAAACTAGAACTGACCATGATTGAGATGGCATGTTTGTATGGAGTGAAAGCTAGAGCTGGGGAGAAGGGGGAAACAGGAGTTTGGGTTGGAGATAGGAAGATTGGAGCCATTGGAGTTAGAATTTCAAACGGGATTACTTCTCATGGTTTAGCTTTCAATGTGGATCCTGATTTGAGGTATTTTAAGCATATTGTACCTTGTGGGATTGCTGATAAAGATGTGACATCTTTGACAAAAGAGACTGAGGAAGTGCTTCCTAGTGAAGAAGTTGTGGAGGAGCAGTTGATTTCTTGTTTTGTTAAGTTATTTGGTTATAGTAAAACTCAGGTGGAGAAGAATCCTACCACTGAATTAGGTTTTGGGGATGGGATTGAGAATTTCAAATAA MRFPRTLKIWKMGIVNYKDALHLQEKLVSARKASKIPDTLLSLQHPPTYTLGKRRTDHNLLIPESDLEKLGAELHYTERGGDITFHGPNQSILYPIISLRDIGFGARKYVEKLELTMIEMACLYGVKARAGEKGETGVWVGDRKIGAIGVRISNGITSHGLAFNVDPDLRYFKHIVPCGIADKDVTSLTKETEEVLPSEEVVEEQLISCFVKLFGYSKTQVEKNPTTELGFGDGIENFK
BLAST of ClCG03G013630.1 vs. Swiss-Prot
Match: LIPB_ARATH (Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.2e-97 Identity = 172/233 (73.82%), Postives = 197/233 (84.55%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. Swiss-Prot
Match: LIPB_DESRM (Octanoyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=lipB PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.4e-42 Identity = 89/223 (39.91%), Postives = 134/223 (60.09%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. Swiss-Prot
Match: LIPB_CALS8 (Octanoyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) GN=lipB PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.5e-41 Identity = 92/224 (41.07%), Postives = 132/224 (58.93%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. Swiss-Prot
Match: LIPB_CHLAD (Octanoyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=lipB PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.6e-38 Identity = 88/209 (42.11%), Postives = 126/209 (60.29%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. Swiss-Prot
Match: LIPB_ACIC5 (Octanoyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) GN=lipB PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.7e-38 Identity = 96/231 (41.56%), Postives = 126/231 (54.55%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TrEMBL
Match: A0A0A0LZZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605760 PE=3 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 6.2e-122 Identity = 218/239 (91.21%), Postives = 226/239 (94.56%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TrEMBL
Match: A0A061GZ22_THECC (Lipoyltransferase 2 isoform 1 OS=Theobroma cacao GN=TCM_040409 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 3.9e-100 Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TrEMBL
Match: A0A061GSI9_THECC (Lipoyltransferase 2 isoform 2 OS=Theobroma cacao GN=TCM_040409 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 3.9e-100 Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TrEMBL
Match: B9GLN3_POPTR (LIPOYLTRANSFERASE 2 family protein OS=Populus trichocarpa GN=POPTR_0001s05170g PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 8.2e-98 Identity = 180/232 (77.59%), Postives = 203/232 (87.50%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TrEMBL
Match: F6GUD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01370 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.1e-97 Identity = 174/217 (80.18%), Postives = 197/217 (90.78%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TAIR10
Match: AT1G04640.1 (AT1G04640.1 lipoyltransferase 2) HSP 1 Score: 357.5 bits (916), Expect = 6.6e-99 Identity = 172/233 (73.82%), Postives = 197/233 (84.55%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TAIR10
Match: AT4G31050.1 (AT4G31050.1 Biotin/lipoate A/B protein ligase family) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 82/228 (35.96%), Postives = 126/228 (55.26%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. TAIR10
Match: AT1G47578.1 (AT1G47578.1 Biotin/lipoate A/B protein ligase family) HSP 1 Score: 132.1 bits (331), Expect = 4.5e-31 Identity = 81/230 (35.22%), Postives = 129/230 (56.09%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. NCBI nr
Match: gi|778663552|ref|XP_011660106.1| (PREDICTED: octanoyltransferase [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 8.9e-122 Identity = 218/239 (91.21%), Postives = 226/239 (94.56%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. NCBI nr
Match: gi|700211351|gb|KGN66447.1| (hypothetical protein Csa_1G605760 [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 8.9e-122 Identity = 218/239 (91.21%), Postives = 226/239 (94.56%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. NCBI nr
Match: gi|659100517|ref|XP_008451131.1| (PREDICTED: octanoyltransferase [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-121 Identity = 220/239 (92.05%), Postives = 225/239 (94.14%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. NCBI nr
Match: gi|590583272|ref|XP_007014855.1| (Lipoyltransferase 2 isoform 1 [Theobroma cacao]) HSP 1 Score: 372.5 bits (955), Expect = 5.6e-100 Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
BLAST of ClCG03G013630.1 vs. NCBI nr
Match: gi|590583276|ref|XP_007014856.1| (Lipoyltransferase 2 isoform 2 [Theobroma cacao]) HSP 1 Score: 372.5 bits (955), Expect = 5.6e-100 Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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