ClCG03G011000.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G011000.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Beta-1,3-glucanase
Location	CG_Chr03 : 20323713 .. 20324075 (+)
Sequence length	363

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGCCTCCCCAATGACCAAATTCAAGTCATGGCTGCAACCCTAGACAACGCTAATGCATGGGTCCAAGACAACATCCTCAGCTTTCCCGACGTCAAATTCAAGTACATTGTTGTTGGAAACGAAATAAAAACCAACCAAGAAGCTACTCGATTCCTCGGACCCGCCATGCAAAATATCCAAACCGCAATTTCAGCTGTGGGTTTGGGAGGCCAAATCAAAGTCTCCACTGCATTTGACACTGGAATTCTTGCACAATCCTTCCCTCCTTCACGAGGCTCCTTCCAACCCGACTATCTTCCAATCCTTAACCCGACCATCCGCTTTCTTATCGATAACAACTCGCCGTTGCTCGTCTAA

mRNA sequence

ATGCTTGGCCTCCCCAATGACCAAATTCAAGTCATGGCTGCAACCCTAGACAACGCTAATGCATGGGTCCAAGACAACATCCTCAGCTTTCCCGACGTCAAATTCAAGTACATTGTTGTTGGAAACGAAATAAAAACCAACCAAGAAGCTACTCGATTCCTCGGACCCGCCATGCAAAATATCCAAACCGCAATTTCAGCTGTGGGTTTGGGAGGCCAAATCAAAGTCTCCACTGCATTTGACACTGGAATTCTTGCACAATCCTTCCCTCCTTCACGAGGCTCCTTCCAACCCGACTATCTTCCAATCCTTAACCCGACCATCCGCTTTCTTATCGATAACAACTCGCCGTTGCTCGTCTAA

Coding sequence (CDS)

ATGCTTGGCCTCCCCAATGACCAAATTCAAGTCATGGCTGCAACCCTAGACAACGCTAATGCATGGGTCCAAGACAACATCCTCAGCTTTCCCGACGTCAAATTCAAGTACATTGTTGTTGGAAACGAAATAAAAACCAACCAAGAAGCTACTCGATTCCTCGGACCCGCCATGCAAAATATCCAAACCGCAATTTCAGCTGTGGGTTTGGGAGGCCAAATCAAAGTCTCCACTGCATTTGACACTGGAATTCTTGCACAATCCTTCCCTCCTTCACGAGGCTCCTTCCAACCCGACTATCTTCCAATCCTTAACCCGACCATCCGCTTTCTTATCGATAACAACTCGCCGTTGCTCGTCTAA

Protein sequence

MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQNIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV

Homology

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BLAST of ClCG03G011000.1 vs. Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-33
Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           +LG+PN+ +Q +A +  NANAWVQ+N+ ++ +VKFKYI VGNE+K +    +FL PAM+N
Sbjct: 90  LLGVPNENLQYIALSQANANAWVQNNVRNYANVKFKYIAVGNEVKPSDSFAQFLVPAMRN 149

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           IQ AIS  GL  +IKVSTA DTG+L ++FPPS GSF+ +Y  +L P IRFL+ + SPLLV
Sbjct: 150 IQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLV 209

[Close]

BLAST of ClCG03G011000.1 vs. Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.6e-32
Identity = 67/122 (54.92%), Postives = 91/122 (74.59%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPD-VKFKYIVVGNEIKTNQEATRFLGPAMQ 60
           +L +PND ++ +A++ DNAN WVQDNI ++ + V+F+Y+ VGNE+K      +FL PA++
Sbjct: 84  LLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEVKPEHSFAQFLVPALE 143

Query: 61  NIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYL-PILNPTIRFLIDNNSPL 120
           NIQ AIS  GLG Q+KVSTA DTG LA+SFPPS+GSF+ DY    L+  IRFL++NN+PL
Sbjct: 144 NIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPL 203

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BLAST of ClCG03G011000.1 vs. Swiss-Prot
Match: BG1_ARATH (Probable glucan endo-1,3-beta-glucosidase BG1 OS=Arabidopsis thaliana GN=BG1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.0e-30
Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 2   LGLPNDQIQVMAATLDNANAWVQDNILSFPD-VKFKYIVVGNEIKTNQEATRFLGPAMQN 61
           LGLPN  +Q +A++   ANAWVQ  ++++ + V+F+YI VGNE+K +    +FL PAM+N
Sbjct: 78  LGLPNSYLQSVASSQSQANAWVQTYVMNYANGVRFRYISVGNEVKISDSYAQFLVPAMEN 137

Query: 62  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 121
           I  A+ A GLGG+IKVST+ D G+L +S+PPS+GSF+ D + ++ P IRFL+  NSPLL+
Sbjct: 138 IDRAVLAAGLGGRIKVSTSVDMGVLRESYPPSKGSFRGDVMVVMEPIIRFLVSKNSPLLL 197

[Close]

BLAST of ClCG03G011000.1 vs. Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRF---LGPA 60
           MLG+PN  ++ +AA+  NA+ WVQ+N+ ++ +VKF+YI VGNE+    E +++   L  A
Sbjct: 76  MLGVPNPDLENVAASQANADTWVQNNVRNYGNVKFRYIAVGNEVSPLNENSKYVPVLLNA 135

Query: 61  MQNIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSP 120
           M+NIQTAIS  GLG QIKVSTA +TG+   + PPS G F+ D    + P I FL+ N +P
Sbjct: 136 MRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAP 195

[Close]

BLAST of ClCG03G011000.1 vs. Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 6.7e-25
Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSF-PDVKFKYIVVGNEIKT---NQEATRFLGP 60
           MLG+PN  +Q +AA   NAN WVQ N+ +F P VKF+YI VGNE+         TR+L P
Sbjct: 83  MLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLP 142

Query: 61  AMQNIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNS 120
           AM+NI+ AIS+ GL   IKVS++ D  ++  SFPPS+GSF+ D    ++P I F+   NS
Sbjct: 143 AMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINS 202

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BLAST of ClCG03G011000.1 vs. TrEMBL
Match: A0A0A0LYQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555080 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.1e-48
Identity = 101/121 (83.47%), Postives = 108/121 (89.26%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPNDQIQ MAAT DNANAW+QDNIL+F DV FKYIVVGNEIKTN+EA RFL PAMQN
Sbjct: 85  MLGLPNDQIQSMAATQDNANAWIQDNILNFADVNFKYIVVGNEIKTNEEAARFLVPAMQN 144

Query: 61  IQTAISAVGLGGQIKVSTAFDTGIL-AQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           IQ AISAVGL GQIKVSTAF TGIL A+SFPPS GSF  +YLPILNPTIRFL+DNNSPLL
Sbjct: 145 IQNAISAVGLQGQIKVSTAFHTGILSAESFPPSHGSFDANYLPILNPTIRFLLDNNSPLL 204

[Close]

BLAST of ClCG03G011000.1 vs. TrEMBL
Match: G8XUV8_9ROSA (Beta-1,3-glucanase OS=Malus hupehensis PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.2e-38
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLG+PNDQ+Q +A++  NAN WVQ+N+ ++ +V+FKYI VGNEIK +  + +FL PAM+N
Sbjct: 86  MLGIPNDQLQNIASSQANANTWVQNNVRNYANVRFKYIAVGNEIKPSDSSAQFLVPAMRN 145

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           IQ AIS+ GLG QIKVSTA DTG+L  SFPPS+G F+ DY PILNP +RFL+DN SPLLV
Sbjct: 146 IQNAISSAGLGNQIKVSTAIDTGVLGNSFPPSKGEFRGDYSPILNPVVRFLVDNKSPLLV 205

[Close]

BLAST of ClCG03G011000.1 vs. TrEMBL
Match: G8Z9V4_9ROSA (Beta-1,3-glucanase OS=Malus hupehensis PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-37
Identity = 76/119 (63.87%), Postives = 96/119 (80.67%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPNDQ+Q +A++  NAN WVQ+N+ ++ +V+FKYI VGNEIK +  + +FL PAM+N
Sbjct: 86  MLGLPNDQLQNIASSQANANTWVQNNVRNYANVRFKYIAVGNEIKPSDSSAQFLVPAMRN 145

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           IQ AIS+ GLG QIKVSTA DTG+L  SFPPS+G F+ DY PILNP +RFL+DN SPLL
Sbjct: 146 IQNAISSAGLGNQIKVSTAIDTGVLGNSFPPSKGEFRGDYSPILNPVVRFLVDNKSPLL 204

[Close]

BLAST of ClCG03G011000.1 vs. TrEMBL
Match: Q3SA43_FAGSY (Putative beta-1,3-glucanase (Fragment) OS=Fagus sylvatica PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-36
Identity = 76/120 (63.33%), Postives = 96/120 (80.00%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPND +Q +A++  NANAWVQ+N+ +F +V+FKYI VG E+K +    +FL PAMQN
Sbjct: 28  MLGLPNDNLQSIASSQANANAWVQNNVKNFGNVRFKYIAVGIEVKPSDSFAQFLVPAMQN 87

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           IQ AISA GL  QIKVSTA DTG+L +SFPPS+GSF+ DY P+L+P IRFL++N SPLLV
Sbjct: 88  IQNAISAAGLKNQIKVSTAIDTGVLGESFPPSKGSFRADYKPLLDPIIRFLVNNGSPLLV 147

[Close]

BLAST of ClCG03G011000.1 vs. TrEMBL
Match: A0A061F3N5_THECC (Glucan endo-1,3-beta-glucosidase OS=Theobroma cacao GN=TCM_024514 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-36
Identity = 74/120 (61.67%), Postives = 96/120 (80.00%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLG+PND+++ +AA   NANAWVQDN+ ++ +VKF+YI VGNE+K +  A RF+ PAMQN
Sbjct: 107 MLGVPNDKLEGLAANQANANAWVQDNVRNYGNVKFRYIAVGNEVKPSDPAARFVVPAMQN 166

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           I+ AI   GLG QIKVSTA DT  L +SFPPS+GSF+PDY P+L+P IRFL++N +PLLV
Sbjct: 167 IRNAIVGAGLGNQIKVSTAIDTVTLGESFPPSKGSFRPDYRPLLDPIIRFLVNNKAPLLV 226

[Close]

BLAST of ClCG03G011000.1 vs. TAIR10
Match: AT3G57270.1 (AT3G57270.1 beta-1,3-glucanase 1)

HSP 1 Score: 131.0 bits (328), Expect = 5.1e-31
Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 2   LGLPNDQIQVMAATLDNANAWVQDNILSFPD-VKFKYIVVGNEIKTNQEATRFLGPAMQN 61
           LGLPN  +Q +A++   ANAWVQ  ++++ + V+F+YI VGNE+K +    +FL PAM+N
Sbjct: 78  LGLPNSYLQSVASSQSQANAWVQTYVMNYANGVRFRYISVGNEVKISDSYAQFLVPAMEN 137

Query: 62  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 121
           I  A+ A GLGG+IKVST+ D G+L +S+PPS+GSF+ D + ++ P IRFL+  NSPLL+
Sbjct: 138 IDRAVLAAGLGGRIKVSTSVDMGVLRESYPPSKGSFRGDVMVVMEPIIRFLVSKNSPLLL 197

[Close]

BLAST of ClCG03G011000.1 vs. TAIR10
Match: AT3G57240.1 (AT3G57240.1 beta-1,3-glucanase 3)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           +L +PN  +Q +A++   A+ WV++N+ ++ +V F+YI VGNE++ + +A  F+ PAMQN
Sbjct: 85  VLDVPNPDLQRLASSQAEADTWVRNNVRNYANVTFRYISVGNEVQPSDQAASFVLPAMQN 144

Query: 61  IQTAISAVGLGGQIKVSTAFDT-GILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           I+ A+S++G    IKVSTA DT GI    FPPS G+F P++   + P I FL    SPLL
Sbjct: 145 IERAVSSLG----IKVSTAIDTRGI--SGFPPSSGTFTPEFRSFIAPVISFLSSKQSPLL 199

[Close]

BLAST of ClCG03G011000.1 vs. TAIR10
Match: AT5G56590.1 (AT5G56590.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-21
Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSF-PDVKFKYIVVGNEIKTNQE--ATRFLGPA 60
           M+G+PN  +   + +  N + W+++++L + P  K  YI VG E   +    A+ F+ PA
Sbjct: 76  MIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPA 135

Query: 61  MQNIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSP 120
           MQN+ TA+  VGL  +IKVST    GIL++SFPPS G+F   Y   L P + FL +N SP
Sbjct: 136 MQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSP 195

[Close]

BLAST of ClCG03G011000.1 vs. TAIR10
Match: AT3G57260.1 (AT3G57260.1 beta-1,3-glucanase 2)

HSP 1 Score: 93.6 bits (231), Expect = 8.9e-20
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPD-VKFKYIVVGNEIKTNQEATRFLGPAMQ 60
           +L +P+  ++ +A++   A+ WVQ+N+ S+ D V+F+YI VGNE+K +     FL  AMQ
Sbjct: 82  ILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKPSVGG--FLLQAMQ 141

Query: 61  NIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           NI+ A+S  GL  ++KVSTA  T     + PPS+G F+ +Y   L P I FL    SPLL
Sbjct: 142 NIENAVSGAGL--EVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLL 198

[Close]

BLAST of ClCG03G011000.1 vs. TAIR10
Match: AT4G29360.1 (AT4G29360.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.8e-18
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSF-PDVKFKYIVVGNEI-KTNQEATRFLGPAM 60
           M+G+PN  +   A    N + W+ +NIL + P  K   I VG E+ +    AT  + PAM
Sbjct: 77  MIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNATGLVLPAM 136

Query: 61  QNIQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPL 120
           +NI TA+   GL  +IK+S++    IL++SFPPS  SF   +   L P + FL++N SP 
Sbjct: 137 RNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPF 196

[Close]

BLAST of ClCG03G011000.1 vs. NCBI nr
Match: gi|659118414|ref|XP_008459107.1| (PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-49
Identity = 102/121 (84.30%), Postives = 109/121 (90.08%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPND+IQ MAAT DNANAWVQDNIL+FPDV FKYIVVGNEIKTN+EA RFL PAMQN
Sbjct: 85  MLGLPNDEIQSMAATQDNANAWVQDNILNFPDVNFKYIVVGNEIKTNEEAARFLVPAMQN 144

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILA-QSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           IQ AISAVGLGG+IKVSTAF TGIL+ +SFPPS GSF   YLPILNPTIRFL+DNNSPLL
Sbjct: 145 IQNAISAVGLGGKIKVSTAFHTGILSVESFPPSHGSFDASYLPILNPTIRFLLDNNSPLL 204

[Close]

BLAST of ClCG03G011000.1 vs. NCBI nr
Match: gi|778662097|ref|XP_011659353.1| (PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-48
Identity = 101/121 (83.47%), Postives = 108/121 (89.26%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPNDQIQ MAAT DNANAW+QDNIL+F DV FKYIVVGNEIKTN+EA RFL PAMQN
Sbjct: 85  MLGLPNDQIQSMAATQDNANAWIQDNILNFADVNFKYIVVGNEIKTNEEAARFLVPAMQN 144

Query: 61  IQTAISAVGLGGQIKVSTAFDTGIL-AQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           IQ AISAVGL GQIKVSTAF TGIL A+SFPPS GSF  +YLPILNPTIRFL+DNNSPLL
Sbjct: 145 IQNAISAVGLQGQIKVSTAFHTGILSAESFPPSHGSFDANYLPILNPTIRFLLDNNSPLL 204

[Close]

BLAST of ClCG03G011000.1 vs. NCBI nr
Match: gi|700210876|gb|KGN65972.1| (hypothetical protein Csa_1G555080 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-48
Identity = 101/121 (83.47%), Postives = 108/121 (89.26%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLGLPNDQIQ MAAT DNANAW+QDNIL+F DV FKYIVVGNEIKTN+EA RFL PAMQN
Sbjct: 85  MLGLPNDQIQSMAATQDNANAWIQDNILNFADVNFKYIVVGNEIKTNEEAARFLVPAMQN 144

Query: 61  IQTAISAVGLGGQIKVSTAFDTGIL-AQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLL 120
           IQ AISAVGL GQIKVSTAF TGIL A+SFPPS GSF  +YLPILNPTIRFL+DNNSPLL
Sbjct: 145 IQNAISAVGLQGQIKVSTAFHTGILSAESFPPSHGSFDANYLPILNPTIRFLLDNNSPLL 204

[Close]

BLAST of ClCG03G011000.1 vs. NCBI nr
Match: gi|256372804|gb|ACU78080.1| (beta-1,3-glucanase [Malus hupehensis])

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-37
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLG+PNDQ+Q +A++  NAN WVQ+N+ ++ +V+FKYI VGNEIK +  + +FL PAM+N
Sbjct: 86  MLGIPNDQLQNIASSQANANTWVQNNVRNYANVRFKYIAVGNEIKPSDSSAQFLVPAMRN 145

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           IQ AIS+ GLG QIKVSTA DTG+L  SFPPS+G F+ DY PILNP +RFL+DN SPLLV
Sbjct: 146 IQNAISSAGLGNQIKVSTAIDTGVLGNSFPPSKGEFRGDYSPILNPVVRFLVDNKSPLLV 205

[Close]

BLAST of ClCG03G011000.1 vs. NCBI nr
Match: gi|657999813|ref|XP_008392341.1| (PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like, partial [Malus domestica])

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-37
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = 1


Query: 1   MLGLPNDQIQVMAATLDNANAWVQDNILSFPDVKFKYIVVGNEIKTNQEATRFLGPAMQN 60
           MLG+PNDQ+Q +A++  NAN WVQ+N+ ++ +V+FKYI VGNEIK +  + +FL PAM+N
Sbjct: 86  MLGIPNDQLQNIASSQANANTWVQNNVRNYANVRFKYIAVGNEIKPSDSSAQFLVPAMRN 145

Query: 61  IQTAISAVGLGGQIKVSTAFDTGILAQSFPPSRGSFQPDYLPILNPTIRFLIDNNSPLLV 120
           IQ AIS+ GLG QIKVSTA DTG+L  SFPPS+G F+ DY PILNP +RFL+DN SPLLV
Sbjct: 146 IQNAISSAGLGNQIKVSTAIDTGVLGNSFPPSKGEFRGDYSPILNPVVRFLVDNKSPLLV 205

The following BLAST results are available for this feature:

BLAST of ClCG03G011000.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E13B_PRUPE	6.6e-33	55.83	Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 S...	[more]
E13A_SOYBN	9.6e-32	54.92	Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1	[more]
BG1_ARATH	9.0e-30	50.83	Probable glucan endo-1,3-beta-glucosidase BG1 OS=Arabidopsis thaliana GN=BG1 PE=...	[more]
E13H_TOBAC	1.2e-26	48.78	Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1...	[more]
GUB_NICPL	6.7e-25	50.00	Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3	[more]

BLAST of ClCG03G011000.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYQ8_CUCSA	5.1e-48	83.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555080 PE=3 SV=1	[more]
G8XUV8_9ROSA	8.2e-38	63.33	Beta-1,3-glucanase OS=Malus hupehensis PE=2 SV=1	[more]
G8Z9V4_9ROSA	1.4e-37	63.87	Beta-1,3-glucanase OS=Malus hupehensis PE=3 SV=1	[more]
Q3SA43_FAGSY	4.5e-36	63.33	Putative beta-1,3-glucanase (Fragment) OS=Fagus sylvatica PE=2 SV=1	[more]
A0A061F3N5_THECC	4.5e-36	61.67	Glucan endo-1,3-beta-glucosidase OS=Theobroma cacao GN=TCM_024514 PE=3 SV=1	[more]

BLAST of ClCG03G011000.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57270.1	5.1e-31	50.83	beta-1,3-glucanase 1	[more]
AT3G57240.1	1.9e-22	44.63	beta-1,3-glucanase 3	[more]
AT5G56590.1	1.6e-21	39.84	O-Glycosyl hydrolases family 17 protein	[more]
AT3G57260.1	8.9e-20	42.98	beta-1,3-glucanase 2	[more]
AT4G29360.1	3.8e-18	37.70	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of ClCG03G011000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118414\|ref\|XP_008459107.1\|	6.6e-49	84.30	PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo]	[more]
gi\|778662097\|ref\|XP_011659353.1\|	7.3e-48	83.47	PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis sativus...	[more]
gi\|700210876\|gb\|KGN65972.1\|	7.3e-48	83.47	hypothetical protein Csa_1G555080 [Cucumis sativus]	[more]
gi\|256372804\|gb\|ACU78080.1\|	1.2e-37	63.33	beta-1,3-glucanase [Malus hupehensis]	[more]
gi\|657999813\|ref\|XP_008392341.1\|	1.2e-37	63.33	PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like, partial [Malus ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000490	Glyco_hydro_17
IPR013781	Glycoside hydrolase, catalytic domain
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0030488	tRNA methylation
cellular_component	GO:0031515	tRNA (m1A) methyltransferase complex
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG03G011000	ClCG03G011000	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG03G011000.1	ClCG03G011000.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G011000.1.cds1	ClCG03G011000.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 2..119 score: 4.0
IPR013781	Glycoside hydrolase, catalytic domain	GENE3D	G3DSA:3.20.20.80		coord: 1..120 score: 1.9
IPR017853	Glycoside hydrolase superfamily	unknown	SSF51445	(Trans)glycosidases	coord: 1..120 score: 1.02
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 1..120 score: 3.1