ClCG03G010310.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG03G010310.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 18513352 .. 18520076 (-)
Sequence length477
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTCATCGAAGGTCACTCTGTTCTCGTTCTTCGAAAGTTCAGCCATGGAATTCCGCTGTGGCTTCATCTTCTTCCTCTTGATTTGTTCATCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACACAGCAGACTCAGTATATCGACGCCGCTCATACCCGATCCACACCTCCTCCAAGCCGTCCGACATCGACTAGGAGGCGATTTTCTGATCCTGATTCGGATTCTAAGGTCCAATTTCAGCTAGAGCAATCATTTGGGGACTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGGTGGCTCTATGTTATGATCTTCGTTTACTTGTTTTGTTGTGCTGTTTATACTTTGAGCAACTTGGATGGTAAATTTGAAATGTTACTTTGTGTAGATTTTGGACGAATTTGCACATGCGTTGATTGGTTTACTGTTGTTCCTTTTAGTTGAATTTACTGTTTCGAAGATTTGCAATGAATATCTTTGGTATTAAATGATCAACTTGATGCCATAAAACTGTGTCTCCCACACCTCGTCTAGATTCTCCTCGCATCCTCAAAGAATTAGTAAAAATCGAGGCGAGGATCATGTTTGTCTCCTTGATGGTGATTCTTGGGTGTTAGCCTTATAGAATGGTAAAACAATTAAACACTTTGTTTTTTGCGAAGTCGTGTGTTTTAGTGGTTCAGGATTAGGGGAACTTGGGGTAAGAGAGGTGCTTTTGAAAGATTTCGTTTCTGTTTAATCGATTGTTTTCCTGGGGATGTAGTTCAAAATGAGGAAGGCATCATGGTTTAGTGTTGTGTACTTGCATCTTTAATGAGGAGGGAGAGGGTATAGGAAGCCGAATTTAAAGGAGAGGCGCAGTTAGGGGCTATGTTAAATGTGCCAACTTCTTTCTGGGCAGCAAATTTGATGATTTTCCACCGAAATATTTTTGGGTTGTTTTCAAAATTACACAATGAGCCGAACTATTTAGAAACTTAGAAAAATTTTACTATCTATCCGCGATGGACCTCTATCGCTTGAGTGACACATCGCCATAGACTTCTATCGCTTGAGCGATAGAAGTCTATCAAGGTCTAATGCTGATAGATAGTAAATTTTCTATATTTGTAAATAGTTTGAATTTTTTTTTCTATTTATAATAATTTTCCAATATTTTTCTTTGATGGTTAGTTCACGGAAAGATGTAGTATCTATGAATCGTATATTTTCTGTTTTCAAGTGTTATCTTTATTTATTTATTTATATATATATATATATATATTATTTATAATGAATTATACTTTTATTGAAAAAAAATGAAACAATATAAGCACTTTAAATAAAAACTAAAGGCCACGAAAAAAAGGGATTCCTACCAAAGAAAGGAGGGAGTCAAATCAAGCAAAATAACATTATAGAACATCTTGTTTTCTTGTTTATGCTTTTAGTGATATGCAAATTCAATACACTTTTTTCTTCTAGATATCCATGGAAGTAATAAATTTAATTGTCCTTTTGTTTCTCTCTTTTTATGTTATTTCAGCAATTCACTACTCTTTTTATGTTTTAAAATTTATGTACAATAATTCAGTAATTGCAGACTTTGCAGTTTTTCTTATCCTAAGCATCCTAAATTATTAGCTATTACTCATGCTATTGCAACTGACATGCTCTACTACCTTTGATAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGCTTTTACTGAAGAGGATAGGAAGAAGTTCACGGTAACAACTCTCTACTCTGGTTATTTCTTTTTGTATGTTGTCATACAATTCTCAAAATCTAGATTGAAGTTCCTTTTAATTTTAAATGTATTTATTTTAGAATTTGTTATGTCGGTTATCCTCTTCCTCCCTTCATTCTCTTCTCCATTCGTAGCTTCATCCATCTTAGCCTTCATCCATTTTAGTCTTCCAGAGTTCAAGTTTATCAATCAAAATTTAAGTTTTGCTTCTTGCTCCTTCAGAATATGAGGCATACCAGTTGTTGTGTGGGGAAGAAATTCTACTTCATTGATTCTTTAGGTTTGGATTTTGTCAAGATTGAAGAAAAAGATGGTTCTCGCCTCTTCTTCATTGTTATTCATCACAAGCAACTTCTTTGGTTTGAAGAAGCTCTAGTTGACGTTATACAGTACTCATAAACAGCACACTTCTTTAGGCATGCTAAGGGAGAGTTTGGGATTTTCTGGTTAAGAAAGAAGTTGAACCATTTTGGTTGGATTATTGAATGTATGGTTATAAAACCTTATGTCTCTAGATCAATAGTAATAGATCTAGTTGGCTACAATAGAAGGGATTGGTTGGGTTTTTGGTAAATGATTTGTGATGCTTGTTTAAATTGTTTCGGCTGGGTGTAATGAACTAGACAAAGTTTCACATGTTGAGTTGCTTCAAGGGAAGAATCATCATGGTGCTATTATGGATTTTTTGCCTTATTCGATGCCTCCAGATGCTTCTCCTCAATTTTATTGGATACAAAAGAAGATTCTAGAGTTTGGGTAAAAATGGCAAATAAAGTAGTATTTAGAAATTTTAGCAATTTATTTGTGGTTGCCAGATTTTTGCTCATAATAATGGAAAAAGATTTAGGATTCATTGGATGAATATTTTCAGGTATCCTTTACAATTAATCTGTTTATGTAGCATAAGGCCTTGCTGGAAATGGAAAAGTATATAGACCATAATTTTGGGAATGGAAAATGGAGACTCATTGGTGATTTACATTTGAAAATCGAGAAATGGTCAAAGGAAAAACACTCTCAAGTTTCACCTGGATTTGATTGGAAGGTTATAGGGGTCGGATTGCAATCAATAACTTATCCCTTTTATGTTGGGAAAGTAGCATTTTGGAGGCAATTGGGAATTATTATGGGGCCTTGTTAGCATTGCTTTCCAAACCTTTAATTTGTTAGATTCTTCAGCAACATACATTGAAGTGGAAAAGAATGTATGTGGCTTCTTACCAACTAGGCAACTACAATTTTGGTTAAGGATCAAAATGGAGGAGATTTCTTCCTTAGATTCCATGACATCACTCCTTTGGATCCTCCTGGTATCATTAATCGTAAGTTACTTCAAGTGATTTTTCAAATCTTTGGATTTAAGTAGACTTATCAAGTTTTGGAAGATGAAGAGGTCATTCCACCATCCAAGAAAGGCTCATTATTCTGTCTAATAGTGAGTTATTGGCATCAGTTGAGAGGACATTAATTCGCCATTTGGTTTGGAGAATTCAACATTAATTATTTCTGGGATGTTGGAATTATTGATCAAGACTTTCATGAGAAGGAATTCAACAGTGTGGTTTTCGAGAAGTCATTACCCTTAACTGTGCTTTCTCTTCTTTATGTAGTACTTATATATATAGTGTGCCTCACAAAGAAAGAAAAAGCTTTTGCTTTTAGAAAACTATTGCACTTTATTGTGGCTTGAGCTTTAACCCCCTGGTACCCGTGGATTTGGCACGATTTCATTTCTTTTGTTTGGATGGTGAAAAGAATTAAGGAATTTAAAATCAGTTAGGATTTGGAATCATGTGTTTTAAGAAAAAATTTCCATTGCAAAGTGGTCGGATTTTGAAGGATTTTTAATTTTCAAAAATTTGTTTCCACTTTTACCCCTAGCCCTAGAGCACAAATTAAGGGATGAAAAATGAGTGACATCGGGCAGAGCTTTGATTTTGAGCGATGGCATTGGGCCGAGCAATGAGATGCGACTATAGGTGGAGCTTCCTGTGTTGGGTTTGATTTCAACGGCGGCAGCGTTGAGTTGGAGCAACTTTGGGTGTCAGCAGTGTGGGGGAGGTGCGATTGTCGGTGTAAATTGAAGGGAAGATCTTGACATGGCTGGAATGGGATGGAAGAACTAAAGGAGAATCTGGTGCGGCTGGAATGGGGTGAAAAGGGTACGTGGAGTGTGAAAGCAAAAGTAAGGTTTTTGGAGAAAAATGAATAAGGATAGTTTTGCAAAAATGCAAAAATGCAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAGCAAAAAAAAAAAAAAAAAAAAAAACAAGAAAAAGAAAACCTAGGGAGTCAAAATTGATCATGCTGATTATTATGCTGACTTCTTAACCATGAAGAATATGTATGTATATAAAATTGATTTTGCTGGCTTCTATGTATATGTGTTTTATATATTATAATTTTGGTTCTAACAAATATTACAAGGGCAAAAGAGTATAATGACATACTTTCCTTTCACTTTTCGCAGGTATCCAAATAAGAAAATTTAATTTAAATGATTTCAAAACATTTTGGTTCCAAACACAAATAATAATTTGAAATCATTTCCTACTTTTAAAATTCTTAAATTTGAAATCATTTCCGTCCAAATCCTAATGCCAAACAGAGCATTAAAAACATTGCTTGTGGTGATGTTTCTGGCATCGACTCCACAAGGTAAGTTTGAGTAGTGTGGAATCAATCATTCAGCCAGTGGTTCTCAGTATGGAGGCCACTTTTTCTAAAGCTTTTGGCCTGCTATTTCAAGATTGTGACAAGAAGACTCCTCCTATTCCTTCATCCATACTGGCCAAATTTGGTCCATTAATAGAAGCCTGTGGTCTTGAGTTTCAGGAAATCCCTCCTTTGGCTTAAGAAGGAAGTTTTGTCATGGTTTAGCTTTGCAAAGTTTTGTTTTGTCTTTTAGGGGTGTGAAAAGGGATCTTACAGAGCTTTGATCCTTGTTCGCTTTCATGTCTCTTATGGGTTTCAATTTTGAAGACCTTTTGTAAATATTCTATAGGCACTATGTCACATAGTTGGAATCCCTTTCGGTAGAGGGTGCTCTCTTTTCTGTGGGCTTGTTTTTTGTTTGACCATGTATTTTTTCATTTTTTTCTCCATGAAAGTAGTTATTTTCATAAAAAAAAAGAGAAGGTTTTGTTTTGTCTTCTGAGGTAGTTGGATTCACTTGCATGAAGAAACTATTTTTCTTCGAGGAGTTTTGTGCAGATTTGGCATGAGGTTTGGGAGTTTGTTGGAATTAATTCATTTGGTATTGAGAAGGTTTCTGATTTTGTTGCAACAGGTTGCCTTGTGTTTGGTTTTGAAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGACTGGTGATCGTTTCTTTCTTTTTATTATTTATTTATTTATTTTGGGGGAAGATTTGAAGTAGCTAATGGTTGGTTTTCAGTGTTTAGTGGAGACCTTATTCATAGCTTCATCATTTATTTGCAAGCTCTCTAATTCTTTCAGACGAAGATATTAGAAAAGTTCTTAGTTCCTTAAGTGTGTATTTATTTTCTTGGTTATCCTTGTCTCTATACTGTGGTATTTTTTTGTTTGTACTTTTACTTTTTCATTCAATTTGAGAGTTTGTATCCCTTGAACATTTATTCGTTTTCATTATATCAATGAGAAGTTGTTTCTTGTTTTTTTTCCTCTTTTAAATATAATTAATTTTTTATTTTTATTTCTGTAGACCTTGTTGCAAGAAGATGGTTTCTACAGTGTAAGATTGGCAACAAATGTTTTGAAGTCACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGC

mRNA sequence

TACTCATCGAAGGTCACTCTGTTCTCGTTCTTCGAAAGTTCAGCCATGGAATTCCGCTGTGGCTTCATCTTCTTCCTCTTGATTTGTTCATCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACACAGCAGACTCAGTATATCGACGCCGCTCATACCCGATCCACACCTCCTCCAAGCCGTCCGACATCGACTAGGAGGCGATTTTCTGATCCTGATTCGGATTCTAAGGTCCAATTTCAGCTAGAGCAATCATTTGGGGACTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGCTTTTACTGAAGAGGATAGGAAGAAGTTCACGTGTAAGATTGGCAACAAATGTTTTGAAGTCACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGC

Coding sequence (CDS)

ATGGAATTCCGCTGTGGCTTCATCTTCTTCCTCTTGATTTGTTCATCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACACAGCAGACTCAGTATATCGACGCCGCTCATACCCGATCCACACCTCCTCCAAGCCGTCCGACATCGACTAGGAGGCGATTTTCTGATCCTGATTCGGATTCTAAGGTCCAATTTCAGCTAGAGCAATCATTTGGGGACTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGCTTTTACTGAAGAGGATAGGAAGAAGTTCACGTGTAAGATTGGCAACAAATGTTTTGAAGTCACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGC

Protein sequence

MEFRCGFIFFLLICSSVAFQSDELLVDDDEFEGTQQTQYIDAAHTRSTPPPSRPTSTRRRFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKKFTCKIGNKCFEVTGRELCLLISES
Homology
[Close]
BLAST of ClCG03G010310.1 vs. TrEMBL
Match: A0A0A0M0I1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652250 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-56
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 1 

Query: 1   MEFRCGF-IFFLLICSSVAFQSDELLVDDDEFEGTQQTQYIDAAHTRSTPPPSRPTSTRR 60
           M FRCGF IF LLICSSVAFQSDELL+DDDEFEGTQ+ QY DAAHTRSTPPPSRPTSTRR
Sbjct: 1   MGFRCGFFIFCLLICSSVAFQSDELLLDDDEFEGTQKIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRK 120
           RFSDPDSDSKVQFQLE SFGDSDFAPAGLFTARLKTSSHGGQSLTK+RFSR+AFTEEDRK
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKMRFSRDAFTEEDRK 120

Query: 121 KFT 123
           KFT
Sbjct: 121 KFT 123

[Close]
BLAST of ClCG03G010310.1 vs. TrEMBL
Match: M5W0B8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009085mg PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.0e-34
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 1 

Query: 6   GFIFFLLICSSVAFQSDELLVDDDEF--EGTQQTQYIDAAHTRSTPPPSRP---TSTRRR 65
           GF   L I  + AFQSDELL+DD+EF  EG   T+  D  +TRS+PPP  P   +++R+R
Sbjct: 13  GFSALLCISVAAAFQSDELLLDDEEFGLEGGLHTKSPDLTYTRSSPPPPSPPTSSTSRKR 72

Query: 66  FSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKK 122
           FSDPDSDSK+QFQL  +FGDSDF+PAG F+ARLKT +HGGQ+LTKLRFSRNAFTEE+++K
Sbjct: 73  FSDPDSDSKIQFQLHHAFGDSDFSPAGTFSARLKTWNHGGQTLTKLRFSRNAFTEEEKEK 132

[Close]
BLAST of ClCG03G010310.1 vs. TrEMBL
Match: W9S3W5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005580 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-31
Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 1 

Query: 7   FIFFLLICSSVAFQSDELLVDDDEFE---GTQQTQYIDAAHTRSTPPPSRPTSTRRRFSD 66
           F+   +  SS+AFQSDELLVDDDEF    G  +T+  D AH RS P     TSTR+RFSD
Sbjct: 12  FLALFVAASSLAFQSDELLVDDDEFGLEGGVVRTKSPDVAHARSQPT----TSTRKRFSD 71

Query: 67  PDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKKFT 123
            DSDSK+QFQLE +FGDSDF+PAG FTARLK S+HGGQ+LTKLRFSRN  T E++ KF+
Sbjct: 72  LDSDSKIQFQLEHAFGDSDFSPAGTFTARLKISNHGGQTLTKLRFSRNELTAEEKDKFS 126

[Close]
BLAST of ClCG03G010310.1 vs. TrEMBL
Match: A0A067K3Q3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18048 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 1 

Query: 7   FIFFLLICSSVAFQSDELLVDDDEF--EGTQ---QTQYIDAAHTRSTPPPSR--PTSTRR 66
           F   LL  S  AFQSDELLVDD+EF  EG     Q +  D A+TRS+P P+   PTSTRR
Sbjct: 10  FTVCLLTSSFRAFQSDELLVDDEEFGIEGASSRPQQRSSDPANTRSSPTPATTTPTSTRR 69

Query: 67  RFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRK 122
           +FSDPDSDSK+QF LE +FGDSDF PAG F+ARLKT  HGGQ+LTKLRFSR++FT+ +++
Sbjct: 70  KFSDPDSDSKIQFTLEHAFGDSDFVPAGTFSARLKTWGHGGQTLTKLRFSRDSFTQVEKE 129

[Close]
BLAST of ClCG03G010310.1 vs. TrEMBL
Match: A0A067DQQ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022239mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-30
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 1 

Query: 7   FIFF---LLIC-SSVAFQSDELLVDDDEF--EGTQQTQYI--DAAHTRSTPPPSRPTSTR 66
           F+FF   LL C SS+AF+SDELLVDD+EF  EG  + Q    + A TRST      T+TR
Sbjct: 11  FLFFFSLLLFCHSSLAFESDELLVDDEEFGLEGGSKPQIKPHEPAPTRSTT-----TTTR 70

Query: 67  RRFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDR 122
           R+ SD DSDSK+QF LE +FGDSDF PAG F+ARLKTSSHGGQ+LTKLRFSRNAFT ED+
Sbjct: 71  RKVSDQDSDSKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDK 128

[Close]
BLAST of ClCG03G010310.1 vs. TAIR10
Match: AT1G65270.2 (AT1G65270.2 unknown protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.0e-30
Identity = 71/119 (59.66%), Postives = 85/119 (71.43%), Query Frame = 1 

Query: 7   FIFFLLICSSVAFQSDELLVDDDEF--EGTQQTQYIDAAHTRSTPPPSRPTST-RRRFSD 66
           F+ FL+  SS+AFQSDELLVDDDEF  EG +         + S+P   + T T RRR+SD
Sbjct: 9   FLSFLIFSSSIAFQSDELLVDDDEFGLEGAKPRSTDLYTSSSSSPQQQQQTPTIRRRYSD 68

Query: 67  P-DSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKKF 122
           P D DSKVQF LE +FGDSDF+PAG F+ARLKT SHGG++LTKLRFSRN F+ E++  F
Sbjct: 69  PTDLDSKVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAF 127

[Close]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match: gi|778664033|ref|XP_011660199.1| (PREDICTED: ER membrane protein complex subunit 10 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-56
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 1 

Query: 1   MEFRCGF-IFFLLICSSVAFQSDELLVDDDEFEGTQQTQYIDAAHTRSTPPPSRPTSTRR 60
           M FRCGF IF LLICSSVAFQSDELL+DDDEFEGTQ+ QY DAAHTRSTPPPSRPTSTRR
Sbjct: 1   MGFRCGFFIFCLLICSSVAFQSDELLLDDDEFEGTQKIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRK 120
           RFSDPDSDSKVQFQLE SFGDSDFAPAGLFTARLKTSSHGGQSLTK+RFSR+AFTEEDRK
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKMRFSRDAFTEEDRK 120

Query: 121 KFT 123
           KFT
Sbjct: 121 KFT 123

[Close]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match: gi|700211546|gb|KGN66642.1| (hypothetical protein Csa_1G652250 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-56
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 1 

Query: 1   MEFRCGF-IFFLLICSSVAFQSDELLVDDDEFEGTQQTQYIDAAHTRSTPPPSRPTSTRR 60
           M FRCGF IF LLICSSVAFQSDELL+DDDEFEGTQ+ QY DAAHTRSTPPPSRPTSTRR
Sbjct: 1   MGFRCGFFIFCLLICSSVAFQSDELLLDDDEFEGTQKIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRK 120
           RFSDPDSDSKVQFQLE SFGDSDFAPAGLFTARLKTSSHGGQSLTK+RFSR+AFTEEDRK
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKMRFSRDAFTEEDRK 120

Query: 121 KFT 123
           KFT
Sbjct: 121 KFT 123

[Close]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match: gi|659085886|ref|XP_008443658.1| (PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-54
Identity = 111/123 (90.24%), Postives = 113/123 (91.87%), Query Frame = 1 

Query: 1   MEFRCGF-IFFLLICSSVAFQSDELLVDDDEFEGTQQTQYIDAAHTRSTPPPSRPTSTRR 60
           M F CGF I  LLICSSVAFQSDELLVDDDEFEGTQQ QY DAAHTRSTPPPSRPTSTRR
Sbjct: 1   MGFHCGFFICCLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDSDSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRK 120
           RFSDPDSDSKVQFQLE SFGDSDFAPAGLFTARLKTS HGGQSLTK+RFSR+AFTEED K
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSGHGGQSLTKMRFSRDAFTEEDSK 120

Query: 121 KFT 123
           KFT
Sbjct: 121 KFT 123

[Close]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match: gi|694425234|ref|XP_009340361.1| (PREDICTED: ER membrane protein complex subunit 10-like [Pyrus x bretschneideri])

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 1 

Query: 11  LLICSSVAFQSDELLVDDDEF--EGTQQTQYIDAAHTRSTPPPSRPTS--TRRRFSDPDS 70
           L I  + AFQSDELLVDD+EF  EG   T+  D  +T+STPPP+ PT+  TR+RFSDPDS
Sbjct: 23  LSIIVAAAFQSDELLVDDEEFGLEGGLHTKSPDLTYTKSTPPPASPTTSPTRKRFSDPDS 82

Query: 71  DSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKKF 122
           DSK+QFQL  +FGDSDF+PAG F+ARLKT +HGGQ+LTKLRFSRNAFTEE+++KF
Sbjct: 83  DSKIQFQLHHAFGDSDFSPAGTFSARLKTWNHGGQTLTKLRFSRNAFTEEEKEKF 137

[Close]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match: gi|694365902|ref|XP_009361716.1| (PREDICTED: ER membrane protein complex subunit 10-like [Pyrus x bretschneideri])

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 1 

Query: 11  LLICSSVAFQSDELLVDDDEF--EGTQQTQYIDAAHTRSTPPPSRPTS--TRRRFSDPDS 70
           L I  + AFQSDELLVDD+EF  EG   T+  D  +T+STPPP+ PT+  TR+RFSDPDS
Sbjct: 35  LSITVAAAFQSDELLVDDEEFGLEGGLHTKSPDLTYTKSTPPPASPTTSPTRKRFSDPDS 94

Query: 71  DSKVQFQLEQSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNAFTEEDRKKF 122
           DSK+QFQL  +FGDSDF+PAG F+ARLKT +HGGQ+LTKLRFSRNAFTEE+++KF
Sbjct: 95  DSKIQFQLHHAFGDSDFSPAGTFSARLKTWNHGGQTLTKLRFSRNAFTEEEKEKF 149

The following BLAST results are available for this feature:
BLAST of ClCG03G010310.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0I1_CUCSA2.1e-5691.87Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652250 PE=4 SV=1[more]
M5W0B8_PRUPE5.0e-3463.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009085mg PE=4 SV=1[more]
W9S3W5_9ROSA1.0e-3163.87Uncharacterized protein OS=Morus notabilis GN=L484_005580 PE=4 SV=1[more]
A0A067K3Q3_JATCU4.0e-3163.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18048 PE=4 SV=1[more]
A0A067DQQ9_CITSI4.4e-3065.04Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022239mg PE=4 SV=1[more]
BLAST of ClCG03G010310.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65270.23.0e-3059.66 unknown protein[more]
BLAST of ClCG03G010310.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664033|ref|XP_011660199.1|3.0e-5691.87PREDICTED: ER membrane protein complex subunit 10 [Cucumis sativus][more]
gi|700211546|gb|KGN66642.1|3.0e-5691.87hypothetical protein Csa_1G652250 [Cucumis sativus][more]
gi|659085886|ref|XP_008443658.1|2.2e-5490.24PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo][more]
gi|694425234|ref|XP_009340361.1|1.5e-3467.83PREDICTED: ER membrane protein complex subunit 10-like [Pyrus x bretschneideri][more]
gi|694365902|ref|XP_009361716.1|1.5e-3467.83PREDICTED: ER membrane protein complex subunit 10-like [Pyrus x bretschneideri][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG03G010310ClCG03G010310gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG03G010310.1ClCG03G010310.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G010310.1.cds3ClCG03G010310.1.cds3CDS
ClCG03G010310.1.cds2ClCG03G010310.1.cds2CDS
ClCG03G010310.1.cds1ClCG03G010310.1.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G010310.1.five_prime_UTR1ClCG03G010310.1.five_prime_UTR1five_prime_UTR