ClCG03G009560.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G009560.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr03 : 13557122 .. 13558358 (-)
Sequence length	897

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCCTTCTCTCTCCCTTCCCTCTTCATTTTATTTTCCCATTAACAAATCCGATTCCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGTATAATCTCTCTGCTATCACTTTTCTTTTCTTTGTTTTTTCTTCCTCTTTCATTCTAACTTCCAGCCTCTTTCACTTCCAACTTTCAATTTTCAGATCTAAGTATTTACAGGATTGTGTTTTTAGCTTAGATGTTAAGCAAAAACCAAATTTTTTAGAGAGATTTAAGTTGTTTTTCAACTACCATATGCTTCTGCTATATCTATTGTGAATTGGGTTTCCTTTTCCTGTTTGTTTACAAGATTTGTTTGTCTTGTCTGTACAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGTACATAATTTTTGCTTTTAATTATTGAAATTTAATCGATTTCATCTAATAAAAGAAGAAGATGTTTTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCTGAGCCGAGCTGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAAAAAAAAAGAACTTTTTTGACCAAACACCATTATTGTAAATAATGTGAAAAAGAAATC

mRNA sequence

CTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCCTTCTCTCTCCCTTCCCTCTTCATTTTATTTTCCCATTAACAAATCCGATTCCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCTGAGCCGAGCTGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAAAAAAAAAGAACTTTTTTGACCAAACACCATTATTGTAAATAATGTGAAAAAGAAATC

Coding sequence (CDS)

ATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCATGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCAACGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTCGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTACACAATTAGCCTCGTCGCCTCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAG

Protein sequence

MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA

Homology

[Close]

BLAST of ClCG03G009560.1 vs. TrEMBL
Match: A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.0e-77
Identity = 142/159 (89.31%), Postives = 147/159 (92.45%), Query Frame = 1


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM +AA  DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQTAAT-DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRST-QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of ClCG03G009560.1 vs. TrEMBL
Match: A0A061E6F3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.1e-41
Identity = 95/164 (57.93%), Postives = 112/164 (68.29%), Query Frame = 1


Query: 9   MSAAAADRHERVVCPKPRRLGLMNNTGNDNP-------FRHSFD-------SDALDLLFF 68
           +S    DR E +VCPKPRRL L+N T ND+P        RH  +       SD LD++  
Sbjct: 24  VSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRWQLRHQAELCDSKAGSDLLDMILT 83

Query: 69  KGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSS 128
           KGGC +E      Q+ASSPP+F GSPPSRVANPLIQDARFGDEK  + P+  P +   SS
Sbjct: 84  KGGCAVEQ--SCAQVASSPPFFSGSPPSRVANPLIQDARFGDEK-IITPMSPPPSGLSSS 143

Query: 129 PPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            P S+ RKGGC+RVNFGN PAVR+EGFDC LDR+RRN SIPALA
Sbjct: 144 SPSSSSRKGGCIRVNFGNKPAVRVEGFDC-LDRDRRNCSIPALA 183

[Close]

BLAST of ClCG03G009560.1 vs. TrEMBL
Match: D7T944_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03580 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.7e-40
Identity = 102/171 (59.65%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 5   CEEMM-SAAAADRHERVVCPKPRRLGLMNNTGND--NPFRHSFDS-----------DALD 64
           CEEM  S  A++R   VVCPKPRRLGL+N T  D   P R    +           D LD
Sbjct: 10  CEEMRRSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSKSGTDLLD 69

Query: 65  LLFFKGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAAS 124
           ++  KGG G E+    TQ+ASSPP+F GSPPSRVANPLIQDARFGDE  KL P+  P  S
Sbjct: 70  IILAKGGYGAES---CTQVASSPPFFSGSPPSRVANPLIQDARFGDE--KLNPISPPLVS 129

Query: 125 PP---SSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            P   SS P S+ RKGGC+R NFGNNPAVRIEGFDC LDR+RRN SIPALA
Sbjct: 130 VPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDC-LDRDRRNCSIPALA 174

[Close]

BLAST of ClCG03G009560.1 vs. TrEMBL
Match: A0A067JZK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-39
Identity = 96/163 (58.90%), Postives = 112/163 (68.71%), Query Frame = 1


Query: 14  ADRHERVVCPKPRRLGLMNNTGNDNPFR-------HSFD-------SDALDLLFFKGGCG 73
           ++R + VVCPKPRRLG  N T +++P R       H  +       +D LD++  KGG G
Sbjct: 26  SERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLSHQAELGDSKAGADLLDIILTKGGYG 85

Query: 74  LENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-PKLLPLFSPAASPP--SSP- 133
           +E     TQ+ASSPP+FCGSPPSRVANPLIQDARFGDEK   + PL      PP  SSP 
Sbjct: 86  VEQ--SCTQVASSPPFFCGSPPSRVANPLIQDARFGDEKLSPVSPLMPMPIQPPSGSSPS 145

Query: 134 PPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           P S+ RKGGCVR NFGN PAVRIEGFDC LDR+RRN SIPALA
Sbjct: 146 PSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDRRNCSIPALA 185

[Close]

BLAST of ClCG03G009560.1 vs. TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 95/174 (54.60%), Postives = 119/174 (68.39%), Query Frame = 1


Query: 5   CEEMMSAAAA--DRHERVVCPKPRRLGLMNNTGND--NPFRHSFD-----------SDAL 64
           CE+M S+ ++  D+ + VVCPKPRRLGL+N T  +   P R               +D L
Sbjct: 14  CEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQQELCDSRAGADLL 73

Query: 65  DLLFFKGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-----PKLLPL 124
           D++  KGG G +  + + Q+ASSPP+FCGSPPSRV+NPLIQDARFGDEK     P+ +P+
Sbjct: 74  DIILAKGGGGADQ-SSAAQVASSPPFFCGSPPSRVSNPLIQDARFGDEKVTPVSPRAIPI 133

Query: 125 FSPAASPPSSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            S  AS PS    ++ RKGGCVR NFGNNPAVR+EGFDC LDR+RRN SIPALA
Sbjct: 134 PSGLASSPS----TSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNCSIPALA 181

[Close]

BLAST of ClCG03G009560.1 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 137.1 bits (344), Expect = 9.3e-33
Identity = 82/155 (52.90%), Postives = 96/155 (61.94%), Query Frame = 1


Query: 20  VVCPKPRRLGLMNNTGNDNP-----FRHSFD-------SDALDLLFFKGGCGLENFNRST 79
           VVCPKPRR+GL NN  + +      F H  +       +D LD++  K G G E  N+  
Sbjct: 32  VVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDIILTKDGYGAEQVNK-- 91

Query: 80  QLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP--AASPPSSPPPSAGRKGG 139
           Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +  P     P SSP  S+GRKGG
Sbjct: 92  QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGG 151

Query: 140 C-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           C VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 152 CVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

[Close]

BLAST of ClCG03G009560.1 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 4.8e-29
Identity = 83/170 (48.82%), Postives = 95/170 (55.88%), Query Frame = 1


Query: 6   EEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGLENFNR 65
           EEMM     DR + VVCPKPRR+GL+ N     P R      A DL   K G  L    R
Sbjct: 81  EEMMGF---DRKDLVVCPKPRRVGLLANNVI-RPLRLHMSQAAADLCDSKAGAELLEIIR 140

Query: 66  STQ--------LASSPPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFSPAA 125
             +        L+SSPPYF GSPPSR ANPL QDARF DEK        P L P +S   
Sbjct: 141 RKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATG 200

Query: 126 SPPSSPPPSAGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 159
            P  S   S+    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 201 FPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

[Close]

BLAST of ClCG03G009560.1 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 8.4e-26
Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 1


Query: 6   EEMM-SAAAADRHERVVCPKPRRLGLMNNTGNDN---PFRHSFD-------SDALDLLFF 65
           EEM  +AA +DR + V+CPKPRR+G +N+  + +      H  +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSS 125
           KGG G    +++  + + P +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P +
Sbjct: 73  KGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPRA 132

Query: 126 ---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
               PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 TKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of ClCG03G009560.1 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-24
Identity = 79/146 (54.11%), Postives = 89/146 (60.96%), Query Frame = 1


Query: 18  ERVVCPKPRRLGLMNNTGNDNPFRHSFD-SDALDLLFFKGGCGL-ENFNRSTQLAS-SPP 77
           + VVCPKPRR    NN     PFR  F  S A D+   K G  L + F R   ++S SPP
Sbjct: 29  DSVVCPKPRRA---NNV--IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 78  YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGR-KGGCVRVNFGNN 137
           +F GSPPSR ANPL QDARFGDEK   L   SP+ SP     PSA R K GC R+ FG  
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK---LNTVSPSLSPLL---PSASRVKSGCGRMKFGVK 148

Query: 138 PA-VRIEGFDCRLDRERRNRSIPALA 159
           PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 PATVRVEGFDC-LNRDRPNSSIPAMA 162

[Close]

BLAST of ClCG03G009560.1 vs. NCBI nr
Match: gi|449445146|ref|XP_004140334.1| (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 142/159 (89.31%), Postives = 147/159 (92.45%), Query Frame = 1


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM +AA  DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQTAAT-DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRST-QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of ClCG03G009560.1 vs. NCBI nr
Match: gi|659131635|ref|XP_008465783.1| (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = 1


Query: 1   MNWLCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM SAA  DR ER+VCPKPRRLGL+N+T NDNPFRH FDSDA+DLLF KGGCGL
Sbjct: 1   MNWVCEEMRSAAT-DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL 60

Query: 61  ENFNRS-TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           E FN S TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSA
Sbjct: 61  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of ClCG03G009560.1 vs. NCBI nr
Match: gi|1009155285|ref|XP_015895630.1| (PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 101/178 (56.74%), Postives = 119/178 (66.85%), Query Frame = 1


Query: 4   LCEEMMSAAAADRHERVVCPKPRRLGLMNNTGNDNPFR-------HSFD-------SDAL 63
           +CEEM S++  DR + VVCPKPRRLGL+N+  +D+P R       H  +       S+ L
Sbjct: 13  VCEEMRSSSM-DRRDPVVCPKPRRLGLLNSAVHDHPIRSFRWHISHQAEPCDSRARSELL 72

Query: 64  DLLFFKGGCGLENFNRS--TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP 123
           D++  KGG G+E    S  TQ+ASSPP+FCGSPPSRVANPLIQDARFGDEK       SP
Sbjct: 73  DIILTKGGYGVEVEQSSCTTQIASSPPFFCGSPPSRVANPLIQDARFGDEKAAPFSPLSP 132

Query: 124 AASP-------PSSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
              P       PS+   S+ RKGGCVR NFGN PAVRIEGFDC LDR+RRN SIPALA
Sbjct: 133 IPPPNGISSASPSAAATSSARKGGCVRANFGNKPAVRIEGFDC-LDRDRRNCSIPALA 188

[Close]

BLAST of ClCG03G009560.1 vs. NCBI nr
Match: gi|590693466|ref|XP_007044341.1| (Uncharacterized protein TCM_009867 [Theobroma cacao])

HSP 1 Score: 175.3 bits (443), Expect = 8.7e-41
Identity = 95/164 (57.93%), Postives = 112/164 (68.29%), Query Frame = 1


Query: 9   MSAAAADRHERVVCPKPRRLGLMNNTGNDNP-------FRHSFD-------SDALDLLFF 68
           +S    DR E +VCPKPRRL L+N T ND+P        RH  +       SD LD++  
Sbjct: 24  VSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRWQLRHQAELCDSKAGSDLLDMILT 83

Query: 69  KGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSS 128
           KGGC +E      Q+ASSPP+F GSPPSRVANPLIQDARFGDEK  + P+  P +   SS
Sbjct: 84  KGGCAVEQ--SCAQVASSPPFFSGSPPSRVANPLIQDARFGDEK-IITPMSPPPSGLSSS 143

Query: 129 PPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            P S+ RKGGC+RVNFGN PAVR+EGFDC LDR+RRN SIPALA
Sbjct: 144 SPSSSSRKGGCIRVNFGNKPAVRVEGFDC-LDRDRRNCSIPALA 183

[Close]

BLAST of ClCG03G009560.1 vs. NCBI nr
Match: gi|225423987|ref|XP_002282662.1| (PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera])

HSP 1 Score: 171.8 bits (434), Expect = 9.6e-40
Identity = 102/171 (59.65%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 5   CEEMM-SAAAADRHERVVCPKPRRLGLMNNTGND--NPFRHSFDS-----------DALD 64
           CEEM  S  A++R   VVCPKPRRLGL+N T  D   P R    +           D LD
Sbjct: 10  CEEMRRSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSKSGTDLLD 69

Query: 65  LLFFKGGCGLENFNRSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAAS 124
           ++  KGG G E+    TQ+ASSPP+F GSPPSRVANPLIQDARFGDE  KL P+  P  S
Sbjct: 70  IILAKGGYGAES---CTQVASSPPFFSGSPPSRVANPLIQDARFGDE--KLNPISPPLVS 129

Query: 125 PP---SSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
            P   SS P S+ RKGGC+R NFGNNPAVRIEGFDC LDR+RRN SIPALA
Sbjct: 130 VPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDC-LDRDRRNCSIPALA 174

The following BLAST results are available for this feature:

BLAST of ClCG03G009560.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1_CUCSA	9.0e-77	89.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1	[more]
A0A061E6F3_THECC	6.1e-41	57.93	Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1	[more]
D7T944_VITVI	6.7e-40	59.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03580 PE=4 SV=...	[more]
A0A067JZK6_JATCU	9.7e-39	58.90	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1	[more]
M1B5R3_SOLTU	1.7e-38	54.60	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1	[more]

BLAST of ClCG03G009560.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68490.1	9.3e-33	52.90	unknown protein	[more]
AT5G16110.1	4.8e-29	48.82	unknown protein	[more]
AT1G13390.1	8.4e-26	42.01	unknown protein	[more]
AT3G02555.1	1.6e-24	54.11	unknown protein	[more]

BLAST of ClCG03G009560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445146\|ref\|XP_004140334.1\|	1.3e-76	89.31	PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus]	[more]
gi\|659131635\|ref\|XP_008465783.1\|	2.4e-75	88.68	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]	[more]
gi\|1009155285\|ref\|XP_015895630.1\|	3.0e-41	56.74	PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba]	[more]
gi\|590693466\|ref\|XP_007044341.1\|	8.7e-41	57.93	Uncharacterized protein TCM_009867 [Theobroma cacao]	[more]
gi\|225423987\|ref\|XP_002282662.1\|	9.6e-40	59.65	PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG03G009560	ClCG03G009560	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG03G009560.1	ClCG03G009560.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G009560.1.three_prime_UTR1	ClCG03G009560.1.three_prime_UTR1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G009560.1.cds2	ClCG03G009560.1.cds2	CDS
ClCG03G009560.1.cds1	ClCG03G009560.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G009560.1.five_prime_UTR2	ClCG03G009560.1.five_prime_UTR2	five_prime_UTR
ClCG03G009560.1.five_prime_UTR1	ClCG03G009560.1.five_prime_UTR1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 4..158 score: 8.5