ClCG03G009100.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G009100.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr03 : 11829280 .. 11834661 (-)
Sequence length	243

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTAGATAACTACGCTGTGGATACCGACTTTGAAGCGGTATCTAGAAGGCGTCAAGGCTCGGCACAACAAGCACTCTCAATACAGTCAAGTTCAACTAACTTACCTCCTCAACCATTGACAACACTATTGCGACCTTCGGGTGCAAACAACTCAAATAAGAGGCCTCCAAGTCTGGTTCCCAAGAACCCTTCAACATATTCTCAAGTGGTTAAGCCTAGGGTTTTCCAACCCAGACCTCCCATTTCAGGATATTTTACAAAGACAATTGTGGTTGATATGACCATAGAACCATAATTTGACAGACCAAGCATTACAAAGGTCTGTTCTCAAATATTTCCTCACGGATTTAATTTTCTTCCTCAGGATATTTCAAAAAACTAGGACATTCTACGAGTTTATTTCAGTGGACACAAAATCCATTGAAATTACTCATGTTCTAGATCGTTATGATCCTTCAAAGATAGTCTATTCAAAGTTGAGAATTTTCAAAGTATTAACATCATCCTATTGGAATCAAGGGATGTTTGTTACAAAGAAGTTCTCAAAACCTTTCAAACCCCAAACATATACATATTGTGACTACATGAGAGCATGGTACAATATCTTATGGTTTTAAGCATATAACCATTTATAGTTTGTGACATTTTGTAAGCAAGCCTACACAATACACTTTCCTAATTGGTTTCAAACCTGGTAGAACTATTTTGGACTCTCTGAAGAAATATTTTCGGTAAAAGTTCAAAGATCATACCACCTTTTTCAAAATAGCATATATGCGTCCCCCATTTCCAAGACGTAGAGATTTGCTCTTTACTTTCAAATTCCATGAATCTCTTGCTAAAACTTCCAGCTAGGAGCACATGGAAATTTCAAGGCGTTGAGTAAAGCTCTTTGAATCAAGTGGTGGGAAAAATTCAATTATTCTCACCTAGAAATATAAAAAATGAAGGACTGGTTTAAAGTCAATGTCCATCTCCAAGATCTAACTCGTCAAGAAGATGAACAATTCACCTTGGCAAAAAATTCAATTATTAGCTCTTTGGCAGGAGCAGGATCACAAGCTGATTTTGCTTCAATTCTCAATACAATAGTGCAACAAATTTCAGATCACGACGAACGAATATAACAAGATGATGTAAACTCTTCCGTGAACAATGAAGCTGAAGAAGACGAAGGCAATTATGACCCTTACGCCGACTTCGACATCAACGATCCTTTCTTAGATTTGTAGCCAAGCTAATCTAAGAAAATAAAATTTTCAAAAAAAAAAGAAAGTATTTTCATATGTTTTTATGTTTCTATCTTTTACTTAGTTTTCTGTAAAAATTTGTAAATTAAGTGTGCAATCAATCTGTACATGTCATCGTCGACCATGAAGATCCACGAGTGAAAAGGAGCATGAAGTAGATAGCAAGTTTTTAAAGTGGATTAACTAACCATAGGCCAGGCGGTTAGCTAGAGATTGGAAGTCTCAGTTAAAGAAGAACTGAGATATCCCACCATCCCACCAACTTAATCGACTGATAAAAGAAAATACATTAGGCAACTGTTAAGGCGGGTAGCCGATTTTTGTAAGTCCCTGGATCATATTTCCCGATATCAAGAGAAGAGATTGGTGATGAGCGATTCAGCAAGTGCACGAATCAAGTTATAATATAAACGGTTTAATTTCGAGTATCATATCCACTGAGGATTGAATTGGATATATTCACTTAGGTACTCAAGAATTGAGTTGATTTTATCTAAGGGATGGACCTCGAATTTGGATTTTGAAAACAAGAACACAAGAGTAAGTGAAACTTCAAGGCATAAGAGTGTTATAGGGTGTTGATATCATTAACTACTACATTAAGTCATGTTTTGGGTTTTCATTGAATGTCATTAACTACTTCATTAAGTCATGCTTTGGGTTTTCATGGAATTATGTGCAAACCATATATTTAAGTTTAGAAACTAATATCTGAATTACTCTCTCAAAAACAATCCTTTCTTATGCGACTTAATTGATTACTAATTTCTTGAAACCAAATTAAGAAGCATAGCATTAAGATTAGTCATGATCAACTTTCTCTAATAGCCTAGCTATTTTCATAAAAGAATAGTAGAGATTTGATGCTATAGATCCAGTTAGACATACAACCACTCAATCATACGTCTAACCTAAGACTTATTGATGATCAATCAATAAAGAATAAATACAATAGTAGTGAAAAACATATCATTCAACAAAATCCATGAAAAACACTAAACCATTAACATAAATCCATAATTAAATCATCCAACACTCTAAAACAATGAGTTTAGCAACACATAGCCATCAAATACATACTTGCATATGAGTTCTTAAGCATAAAAGTAAAAGGGAAAGAGAAACTTAAGAAGAAAGACTCTCGAATTACTTCCTGATATTGAACTCCTTCAATCTCCTCTTGGCCAGCACCTCGAGATCTCGAACGACCTTCAACTCTCCAACTCTTTCACTCTTTGTGATAGCAAATTCACACCTTTTGGGTTCTCTTTTCTCTCTAATTTCGTGTGTTTCCTTTGGGACTCTCTGTGTATTTTCTTGTGTGTCTAGGGTTCCTAAGAACCCCTCAATATATAGAAGTGGCTGCCCAAAATATTTTCCAATTTTGAAAAATCTACAAAAAAGGAAAGTTGGCATCGTTGTGCTCTAACACTGTTTGTCATCATAGGGGCAGCATAGCGACGCTGTCCAACATCGTAGGCTGGTTTCAAGCACAACGATGATCCAGCAGACTACCAAATATGATGCTCTCGAGTCTAGAGTGCAGCGGGGCAACACAATGATGCTCTCGGTTGCGCTGCCCTATTTCTAGGGTTTTTCTACTTTTTCTTCCGTTTTTCACTCGGTTTTAGCTCGGTTTGGTTCCTTTGACTTCTAAACCTTATTTTCTTCATTATCACCTAAAAACCACTAGCAAACATCCCTAAATCAAAGGCAAGAAAAGCACTTTTTAGGTGCTTTTCAGTTGGTATGGTTGATATGTGTACAGTTTTCCAATCCAGGTCATTCAGGAGAAGCTGGGTGACGACATCCCTTATCATGAAGAGATAATAAGGGTGATTAGAGATGGCCAAAAAACCAAGCTGAGCGATCAAAATTGGTCGAACTGAGGGTTGGAGGCCAGTTTTTAAAAAATAATCGGTCGGGTTGGTTTTCTCAAAAAACAGTTATAAATCGACCCGACCCTACCCTGACCGAAATTATTAAATATTATAATATTTATTAATAATTTAATATAATATGCTTTTATTATAAATAAAAATAGAGAGCGAGGGCAAGAGCGAGATTGAGAGAGTAAGAGTAAGAGAGAGAGCGAGAGAGATAAGAGTGATTGTGTGAGAGGAAAGGACACAAGAGCGAGTGAGAGCGAGAGAGAGAGAGAGAGAGCAAAAGTGAGAGAGATAAGAATGATTGTGCGAGAGGAAGGAAAACGAGAGCAAGCGAGAGCGAGAGAGATAAGAGTGATTGTGTGAGAGGAAAGGAAGCGAGAGCAAGCGAGAGAGACCGACCTCACCCCGAAATCAACCGATCTAACCCCAAAACCGATCAATAGGTTTAAGCAATATATTTTGAAAGTGCGGTTCTCAAACTTTCAAACCGAATAGGGCGGTTTCGGTGCCAATTTTCATGAAAAAATGGCCCTGCCCGATCGATGCTCACCTGTAAAAGATAAGATCAAGAAGAGCTTGAAGACGGTGCAGACATATCCCATCTATCTTTATTTGCTTTTGTAATTTAGTGTATTTTGTTTCTTTCGAATAATTGAGATTCGTGATTAAAAATAAGGTCAAGTGGGGGTCCTGTCCCACCGACAAAATCTTATCACAATCTTTTACTTTTTAAATTTTTAAAAGAACGATTAACAAAGGATAAGATGCCTTAGGGGTCTTGTCCTGTCGACACCTTTGAAATCTTTCACATATAGTTAATAATTATGGAGACACTTGTAAAGATCTTAGAGAAAAAGTAGTAATTGCTACTAAAGTGCAATTATTGTCTTTCCTCTGTAAGTAGCACACATCTTTACCTTCAATGGATTAAATATATATTTCCCCCTAGTAAAAAATTCTTGAAATTCACACAAATCTATATAAACTAATTTTAATAATTTAGTACACTTTCATGAGGTCCTTTTGTGATCTCAACTTTGCTGCATATTTCACATTTATCAAAATTATTTTTTTAAGCTAGGAATTAATTCAAGGGTACTAATTATCCCTATATATTTACTATTATATGACATAAACAAACATGCCAAAAATTTGAAGAAGATAGAATATAGACCAATAGATGATTTATTAATATTCTCAATGCTTATTTTGAACATTTCATCACAAGCATAACTTTTCCCTACAAAGATTCCCTTTTTAGTTATCACACATATTAATCATATTTCATAGCATGTTTAAAACCACATTTATTAAAAAGATAACTTGACATTAAATTCTTCCTCATGGTGGAGTATGTAAAGCAAACCTGTCAAAATTAGAACCCTTTTAAAGGTAAATTTTAATTCAACCTCACAAATTTTTATAATTTGGGTGGTATGAGAGTCACCAAACATTATTATTTTATACTCATTAAAAGGAATATAAACTTTGAACCAGTCTTTGTCATAGCAGACATGTCTAGGGGTGTTCAAGAAATCTAAGAATCTGACCAACCCGGACTATCCAACCCAAACCATAAGGGTTGGATCGGGTTAGATTTCTTTTTTGGGTTGGGTTTGAATTATTTAAAAGTACGTTTTGGGTCAGTTCTTGGGTTTAGAAAATAGATTGCCTTCTTGAATCAATGTATCATACTCCTAAAGAGATTTCTTTTTGCTTAAGACATATTTTTATAAAATTCTCTCCATGATGGTAGAAGTTTGTCAATTATGTTGGCAACAATAAGATTGTCTCTCCAATTTTTATTCCTTCAGATGTTATTTTAATCAACATTTGAAATGGTTTGTTGAGATCACTGGCATTCTCTTTAATTAAGTTTTTAAATAATAGATTTCATCTATGATTTTCCTTAAAATTGTTGGGAGAATTGCAAATCATGGATGAAATTGGAGTACATATTAAAAAACAATCACATAAACAATTAGGTTAACACATGGATATCTTGCTCTCTTTAAGGAGATTCAAGCCCTCTGCATTTGTGTATTATATTATTTCTTTATATCAATCGTCGATGCAACAAATATTCTACGACATGTCCCCTCTAGGATACAACAATCCAACTAGAACGTTTTGTAGCTCAAACCATTATGCACTAAGAGGTTAACCTCAAGACTCCACAACTAAGAACGTCTCTCTTTTGACTAATTGCTCTTAAAATAGCAAATGAGAGAAAAATAG

mRNA sequence

ATGAGCGTAGATAACTACGCTGTGGATACCGACTTTGAAGCGGTATCTAGAAGGCGTCAAGGCTCGGCACAACAAGCACTCTCAATACAGTCAAGTTCAACTAACTTACCTCCTCAACCATTGACAACACTATTGCGACCTTCGGGTGCAAACAACTCAAATAAGAGGCCTCCAAGTCTGGTTCCCAAGAACCCTTCAACATATTCTCAAGTGGTTAAGCCTAGGCAAATGAGAGAAAAATAG

Coding sequence (CDS)

ATGAGCGTAGATAACTACGCTGTGGATACCGACTTTGAAGCGGTATCTAGAAGGCGTCAAGGCTCGGCACAACAAGCACTCTCAATACAGTCAAGTTCAACTAACTTACCTCCTCAACCATTGACAACACTATTGCGACCTTCGGGTGCAAACAACTCAAATAAGAGGCCTCCAAGTCTGGTTCCCAAGAACCCTTCAACATATTCTCAAGTGGTTAAGCCTAGGCAAATGAGAGAAAAATAG

Protein sequence

MSVDNYAVDTDFEAVSRRRQGSAQQALSIQSSSTNLPPQPLTTLLRPSGANNSNKRPPSLVPKNPSTYSQVVKPRQMREK

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG03G009100	ClCG03G009100	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG03G009100.1	ClCG03G009100.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G009100.1.cds2	ClCG03G009100.1.cds2	CDS
ClCG03G009100.1.cds1	ClCG03G009100.1.cds1	CDS