ClCG03G008980.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG03G008980.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 11357705 .. 11359961 (-)
Sequence length867
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACACAAATTCTCTGCTAAACCCGTCCTAAATATCTCATTTCGAATTTCATGTGCTATAGTTGGCAACTTTCTTTGGTGGCAAGTGCCCAACCCACCACATCAGTCATTCCATGTTTTTCCCTTTCTCCTTCGACTGCCGGTTCTGCAGAAAGAAGTAACTTGGATCTGATGCTTCGATTTTGATCCATGGCGGCCGTCGGGACTGAGTTTTGAAGTAACAACAAACACGGTAATGGAAGATTTTCGATGGCTTACTGGTAGGTTCGTTCCTTTTGAATTTTTTTTTGGTTTCAGTTTCTAAATTTTGAGTTCTTGGTTTTCTTTTTGTGGAAGATTTTCTTAGCCTGCTTTTGATTTTTCAATCTGCAACTCAAATCACATATACAATTCTCGTCTCTGAAATTTGGTTCTAAGGAAGAAGAAGGTCGGTGTACTTGGAAGCATCAGTTCAGTGATTCGGTAAAAAGAAAGGTTTCTATTTTCTTTCCAATCGCACTAGTTTCCTCATCTTCTGCTGTTAGGGCAAGTAATGAAAGTTGGCAGCTGTTTGGATCGTATACATACATTCAAATGATTTTTCCCAATAATGGCCAGGGCCGACGCTCAAAAGAGGGTGAGAATAAGAGGTACATTTTGAATCGTTAAGAATTTAATGGTTAAGTTATAATTTAGTCACTATGGTTTTAAGAGTTTGAATTTAGTCCTATGCTTTGAGAAAGCATCATAAATATGATTAAATCCTCATAAATACTTCCTATTATGAGGATCTTATCAAACAAATTCTAATTATAAATCATGAGACTAGCTTTCTCCAAATCATAGTACTAAATTTGCAATTTGACCTAATTTTAATGAGTTGGAGTTCGAGCACTTTAGTTGACTTTAATCGTACATGATAATTATCAATTGCTTTCCTTTATAAAATAGATAATGTTAATGCCACCAGAATTGGATATATTATGATGGACTAGTATACCATTTTGGTCCTACCTTTTGCTTATTCTCTATTTGTTCATCGTTAGTTTTTAAGTGTCTAAATTTAGTCATCCTTTGAATAAATCTCAGAAAAAATCATCATTGTTATTGGACTTCGAATGAACAATGTCAGGCATCCATTGATATTTGATTAGTAGATATAATTATCATGAACGTCTAAATTCATTCAAGTTCATAAAATTGCTCCGTCGTTGAGTATTAGAGGGTGAACAAAAATAGGAAAAGAAACTTCTGGGGGAAATTGAGCAGAAGAGTGGGCTTCTTCATTAAGTTTAGATATATATTCATAATGATGACATTTAGACACGTTTCTGTGGTACAAAAAACTATCACCTGAAACTTTTAGCTTTATGAGTGCATACATAGTTGTGCACTTCCTTTTTGTTCATTTTTCCTTTTCCCTGCAGCTTACTGTATCTACTGAATTATCCTCAGGCATCAATAAAAACGGCTGCTTTGTAGCTGAGCAAGTTTTTACTCCATTCTCAACTCCACTGGAAGGTCTGGCATTCAAATCTTAGACTAGGCTTCTTCCACCAATTTTGGGGAGCAAGATGAGACAGCTTCAGCAACTGTTAGAAAGATATGGTCCTCCCCAATCAGATTAGCAAGATTGGATGCGTGGAGTTTGTCAATCACTACCGGCCCAGGGTTTGCCAAAACAAGCTGTTCAACAACACACAAACTTCTGGTAAAGCATATTTAGAAAATCTTACAGCACATATATACCTTTACTGTGCATACCATTCTGAAATAATTGTTTTTATTTATTTTATTTTTACATTTAATAACGAGAACATTCTGAAGTACCTGAATGTCTCGTTTCTGGAGATTCCTGTATAGCTCTTCCAAGGCATGAATTCCACTAGTGTCAATGTCGGTAACAGCTACAACAAATAAAACCCCAGAATTTTGAGTTCAGAACAAGCAACAGTGATTTGATTGTTAGGTTTTCTACTGTGCAGGATTCGTCCAAAATATTTGGAAAGATTGAGAGAGTACTTACGAGACATCTCAACAATCAAAAACTGAGGTTTTGTTGAATAAGCCTTCTTTTTTTGTTCTTCCTCATCTGCCAACCATCTCAATATCCTGCATGGAGTTTCCAATATTATAAGGGCAAGGGTAGCAGAATTGGAAAAGGCAAGAGCTCCTGTAACTAACAGAACCTTCCATTTTCAAGGCATACATTATCCAAACATGAAGTTAATAAATGCTATGTTTTAACTTGATTCTATAATATTTAGTTGGAAAAAGA

mRNA sequence

AGAACACAAATTCTCTGCTAAACCCGTCCTAAATATCTCATTTCGAATTTCATGTGCTATAGTTGGCAACTTTCTTTGGTGGCAAGTGCCCAACCCACCACATCAGTCATTCCATGTTTTTCCCTTTCTCCTTCGACTGCCGGTTCTGCAGAAAGAAGTAACTTGGATCTGATGCTTCGATTTTGATCCATGGCGGCCGTCGGGACTGAGTTTTGAAGTAACAACAAACACGGTAATGGAAGATTTTCGATGGCTTACTGTTTCCTCATCTTCTGCTGTTAGGGCAAGTAATGAAAGTTGGCAGCTGTTTGGATCGTATACATACATTCAAATGATTTTTCCCAATAATGGCCAGGGCCGACGCTCAAAAGAGGGCATCAATAAAAACGGCTGCTTTGTAGCTGAGCAAGCTTCTTCCACCAATTTTGGGGAGCAAGATGAGACAGCTTCAGCAACTGTTAGAAAGATATGGTCCTCCCCAATCAGATTAGCAAGATTGGATGCGTGGAGTTTGTCAATCACTACCGGCCCAGGGTTTGCCAAAACAAGCTGTTCAACAACACACAAACTTCTGGATTCGTCCAAAATATTTGGAAAGATTGAGAGAGTACTTACGAGACATCTCAACAATCAAAAACTGAGGTTTTGTTGAATAAGCCTTCTTTTTTTGTTCTTCCTCATCTGCCAACCATCTCAATATCCTGCATGGAGTTTCCAATATTATAAGGGCAAGGGTAGCAGAATTGGAAAAGGCAAGAGCTCCTGTAACTAACAGAACCTTCCATTTTCAAGGCATACATTATCCAAACATGAAGTTAATAAATGCTATGTTTTAACTTGATTCTATAATATTTAGTTGGAAAAAGA

Coding sequence (CDS)

ATGGAAGATTTTCGATGGCTTACTGTTTCCTCATCTTCTGCTGTTAGGGCAAGTAATGAAAGTTGGCAGCTGTTTGGATCGTATACATACATTCAAATGATTTTTCCCAATAATGGCCAGGGCCGACGCTCAAAAGAGGGCATCAATAAAAACGGCTGCTTTGTAGCTGAGCAAGCTTCTTCCACCAATTTTGGGGAGCAAGATGAGACAGCTTCAGCAACTGTTAGAAAGATATGGTCCTCCCCAATCAGATTAGCAAGATTGGATGCGTGGAGTTTGTCAATCACTACCGGCCCAGGGTTTGCCAAAACAAGCTGTTCAACAACACACAAACTTCTGGATTCGTCCAAAATATTTGGAAAGATTGAGAGAGTACTTACGAGACATCTCAACAATCAAAAACTGAGGTTTTGTTGA

Protein sequence

MEDFRWLTVSSSSAVRASNESWQLFGSYTYIQMIFPNNGQGRRSKEGINKNGCFVAEQASSTNFGEQDETASATVRKIWSSPIRLARLDAWSLSITTGPGFAKTSCSTTHKLLDSSKIFGKIERVLTRHLNNQKLRFC
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG03G008980ClCG03G008980gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG03G008980.1ClCG03G008980.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G008980.1.three_prime_UTR1ClCG03G008980.1.three_prime_UTR1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G008980.1.cds5ClCG03G008980.1.cds5CDS
ClCG03G008980.1.cds4ClCG03G008980.1.cds4CDS
ClCG03G008980.1.cds3ClCG03G008980.1.cds3CDS
ClCG03G008980.1.cds2ClCG03G008980.1.cds2CDS
ClCG03G008980.1.cds1ClCG03G008980.1.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG03G008980.1.five_prime_UTR1ClCG03G008980.1.five_prime_UTR1five_prime_UTR