ClCG03G008860.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGCACAGTGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTGAAAGCAGGAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAAACTGCTCCATGAGAGGGAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAGAGTCAGACAAGTTTATTACAACCTACACTTTTGGGACTCATACTGCAAACCACACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACCCCAGATGGGGTTTCTGTTAGTTTCAGATGTGTTGATCCAGGCACCTTGGATCATGTTCAGATTAACAAGTTTGATGGTGCAAATTGGGAGCAAGCTCATCATCTTCATCATTCTAATTTGTCAAACAACTAG ATGGTTGTGCACAGTGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTGAAAGCAGGAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAAACTGCTCCATGAGAGGGAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAGAGTCAGACAAGTTTATTACAACCTACACTTTTGGGACTCATACTGCAAACCACACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACCCCAGATGGGGTTTCTGTTAGTTTCAGATGTGTTGATCCAGGCACCTTGGATCATGTTCAGATTAACAAGTTTGATGGTGCAAATTGGGAGCAAGCTCATCATCTTCATCATTCTAATTTGTCAAACAACTAG ATGGTTGTGCACAGTGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTGAAAGCAGGAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAAACTGCTCCATGAGAGGGAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAGAGTCAGACAAGTTTATTACAACCTACACTTTTGGGACTCATACTGCAAACCACACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACCCCAGATGGGGTTTCTGTTAGTTTCAGATGTGTTGATCCAGGCACCTTGGATCATGTTCAGATTAACAAGTTTGATGGTGCAAATTGGGAGCAAGCTCATCATCTTCATCATTCTAATTTGTCAAACAACTAG MVVHSGGCHCKRIRWEVKAGSSVTAWDCNCSNCSMRGNTHFTVPSQHFKLLGESDKFITTYTFGTHTANHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQINKFDGANWEQAHHLHHSNLSNN
BLAST of ClCG03G008860.1 vs. Swiss-Prot
Match: CENPV_MOUSE (Centromere protein V OS=Mus musculus GN=Cenpv PE=1 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-30 Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. Swiss-Prot
Match: CENPV_HUMAN (Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30 Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TrEMBL
Match: A0A0A0KN47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410710 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 9.4e-64 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TrEMBL
Match: I3SET8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 5.3e-51 Identity = 87/120 (72.50%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TrEMBL
Match: A0A059BUT9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02876 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50 Identity = 85/120 (70.83%), Postives = 105/120 (87.50%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TrEMBL
Match: U5FK86_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02700g PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.0e-50 Identity = 86/121 (71.07%), Postives = 105/121 (86.78%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TrEMBL
Match: I1MZF8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G041500 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 2.6e-50 Identity = 86/120 (71.67%), Postives = 102/120 (85.00%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. TAIR10
Match: AT5G16940.1 (AT5G16940.1 carbon-sulfur lyases) HSP 1 Score: 188.0 bits (476), Expect = 3.8e-48 Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. NCBI nr
Match: gi|700195853|gb|KGN51030.1| (hypothetical protein Csa_5G410710 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 1.3e-63 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. NCBI nr
Match: gi|1021494247|ref|XP_016190113.1| (PREDICTED: centromere protein V [Arachis ipaensis]) HSP 1 Score: 209.5 bits (532), Expect = 3.4e-51 Identity = 88/116 (75.86%), Postives = 102/116 (87.93%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. NCBI nr
Match: gi|388501428|gb|AFK38780.1| (unknown [Lotus japonicus]) HSP 1 Score: 208.4 bits (529), Expect = 7.7e-51 Identity = 87/120 (72.50%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. NCBI nr
Match: gi|702374682|ref|XP_010062288.1| (PREDICTED: centromere protein V-like isoform X3 [Eucalyptus grandis]) HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50 Identity = 85/120 (70.83%), Postives = 105/120 (87.50%), Query Frame = 1
BLAST of ClCG03G008860.1 vs. NCBI nr
Match: gi|702374676|ref|XP_010062287.1| (PREDICTED: centromere protein V-like isoform X2 [Eucalyptus grandis]) HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50 Identity = 85/120 (70.83%), Postives = 105/120 (87.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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