ClCG03G008680.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G008680.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Transcription factor, putative
Location	CG_Chr03 : 10472168 .. 10474835 (-)
Sequence length	882

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTGCAAATTCAGCTCTACAAGAACTGGATGGCATGGAGAAAAATGGTGGTTATTTGAAGACTTTAGCCATTGGAAAAGGCCATGAAAATCCAAATAGTAACTTCGTGTTTCGAAACACAACGAATTACCAACTCGATCAACAACAGCAGCAGCAGCAGCAGCAACAGTCTCTCATCAACTTCAAGTGTGGGATTGACAATACTATTTTGGGTGATAAGATGAATAACAATGAATCTTTGTTGAGCTTTGACGCACAAGGGATTTGTCAATTAGATCAAACTTACAATTGGGATGATCAGCAACGTGTGATGGAGGATCCTAATTGCTTTCAAACAGCTACCAATCACAATAATTATAGCCCTTCAAAAGATCACCATAATAAAAATGGAGATAATGGATCTGTTTATGAGTGGCTTTATTCTGAACCAACTACTCATTTTTCTGATGCCATTCAAGAAGCTGAAGCAACTCAAGAGATTATTGCCAATCACAAACGATCCCATACGGTACTCAGTTTAGTCTTTCAACGTTTAAGTTTTCGTTTCTTTTCAATTTCTTCTTACTTTTAAAAGCTTTTCAGTGCTTGATCAAACAAAATATGTCTCTAGTTTGTTTTACAAATTTGATCTGGTTGAAAATTAAGTGTATAAACACTACTTATATTGATTGATTTCTGTTTTCTTGTCATTTACATTTAAAAAAAAAGGTTCAAAACCAACTTCAAAAATATAAGCAAATTAAACTTTTTATAATGTTTCAAATGTTTAACCAAAAATTTAACTATGGATCCAAATGTTTCATTATAATAACGAAAACCATTGCAAGCACAATTTTTCAAAACAAAAATTCAAATAATTATCAAACAAATACTCATATATCAAATTTTAAAAATGAACCCATCATATTTTATTGGATAAACATGAAGTTCAATCTCAAAACTAATTAATTATAGAAATAACTATGTATCTTATAAAAGATTGTGAGATCTCTACTTCTTTTCAACATTAGATCCTTATCATAGCCTCTTATCCCATTTTTCTTTCTTCTAATTGAAAATTATAAATTTTAATATCATATTAGATAAAGCAGAGTGAAATTGAAAAATCTTGTTCGTTTATAAATTGGTGTGAAGTCAGTAACAAAAATTTGATTGAATATTGAAAGGGGGAGAGCAGTGGGAGTGTTTGTAAGAAGCAATGCACTGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGGTTTTTTGTTTCTATTTTTTTTCATTTTCAACAACGTTAATTAGTTTGCTTGAAATTTAAGCAACAAAAAAAAAAAAAAAAAAAGAAGTAAGATTTAAGGATCTGAAAGAATGTCTGTTGTGTGTTGTTTGTTGTTTGTTTTATTACTTAGAATCGACGAGAAAGGATTAGCGAGAGGCTGAAGATATTGCAAGAATTGGTTCCCAATGGCTCCAAGGTGATTCTTGCTATCTACTATTTTAAAATAAGAAAAATAAAATGTTTGAATTGTATATTTGGTAACTTATCATCTATAATTAGAATTATTTAGTCAGATAAAAACTTCATAAATAATCCTACCTCTACTATGAAGATTTTGTTAAACTATAAAGATCATTTTTTAGATTTTATTAAACTATAGACACTGAATTCAAATTTTTTCAAACAAAAAAGAAATCTTGATATATGGAAGATAGAGTTTTATTGCCCAAATATAACTTTCTTAATAATAATAATAATAATAATAATAAAAAATAATAATAATAATAATAGAGCAATTATTCTAACCTAGATATTTACACTACATTATAATGTGCATAAGAACTCAAACAATTTTTTTTTTCCAAAATTTATGCTGTAAGATAAGAAAAGCCTTGACTTTTTTTTTTTTTTTTCCAATTTATTTTGCAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGCTATGTCAAATTTCTTCAACTACAAGTGAAGGTACATATAAGTTCCATATTGTACTGATTTCTTTCCAAATTTTGAGTTTCTTCATTTGAGATTAGTTAAATCTTTTATTATTGTTGTCCCCAAATTCTTACATTTTAAACTTTTTGAATCTATAGCCTTTCAGGAATGAAAATATAAAACTTAATCTTAACTTTTGTTTATATAGTTTTATTTAAGGATTAAAATATTATTTTCAATATCGATATCGAGATTTCAATTCAATAGATATATCGACAGATATTTCTGTAAGTCAAAAAATTTATAAAATTTATTTAGATATTTGTTAATAGTAATATTATTCATATTCAACTAAATAGATGATACTTTCATGTTTCATGTTTTCGAACATTTATAGATATTGGAGGTATCAATGAATATGTAATATCGATGTTGAATCCTTCAATTTAGGCATATATTGACATGTCAATGGACATTTTCTTCTCTAGTTTTATTTACCCCTCCATTCCTTTTTCGCTTTGATCTTATAATATTTGTCATTAAAATTTTGAATTTCAGATCCTAGCGACCGATGAATTTTGGCCTGTTGAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGTTCAAACAGTGAGAAGTGA

mRNA sequence

ATGGCACTTGCAAATTCAGCTCTACAAGAACTGGATGGCATGGAGAAAAATGGTGGTTATTTGAAGACTTTAGCCATTGGAAAAGGCCATGAAAATCCAAATAGTAACTTCGTGTTTCGAAACACAACGAATTACCAACTCGATCAACAACAGCAGCAGCAGCAGCAGCAACAGTCTCTCATCAACTTCAAGTGTGGGATTGACAATACTATTTTGGGTGATAAGATGAATAACAATGAATCTTTGTTGAGCTTTGACGCACAAGGGATTTGTCAATTAGATCAAACTTACAATTGGGATGATCAGCAACGTGTGATGGAGGATCCTAATTGCTTTCAAACAGCTACCAATCACAATAATTATAGCCCTTCAAAAGATCACCATAATAAAAATGGAGATAATGGATCTGTTTATGAGTGGCTTTATTCTGAACCAACTACTCATTTTTCTGATGCCATTCAAGAAGCTGAAGCAACTCAAGAGATTATTGCCAATCACAAACGATCCCATACGGGGGAGAGCAGTGGGAGTGTTTGTAAGAAGCAATGCACTGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAAAGGATTAGCGAGAGGCTGAAGATATTGCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGCTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGAATTTTGGCCTGTTGAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGTTCAAACAGTGAGAAGTGA

Coding sequence (CDS)

ATGGCACTTGCAAATTCAGCTCTACAAGAACTGGATGGCATGGAGAAAAATGGTGGTTATTTGAAGACTTTAGCCATTGGAAAAGGCCATGAAAATCCAAATAGTAACTTCGTGTTTCGAAACACAACGAATTACCAACTCGATCAACAACAGCAGCAGCAGCAGCAGCAACAGTCTCTCATCAACTTCAAGTGTGGGATTGACAATACTATTTTGGGTGATAAGATGAATAACAATGAATCTTTGTTGAGCTTTGACGCACAAGGGATTTGTCAATTAGATCAAACTTACAATTGGGATGATCAGCAACGTGTGATGGAGGATCCTAATTGCTTTCAAACAGCTACCAATCACAATAATTATAGCCCTTCAAAAGATCACCATAATAAAAATGGAGATAATGGATCTGTTTATGAGTGGCTTTATTCTGAACCAACTACTCATTTTTCTGATGCCATTCAAGAAGCTGAAGCAACTCAAGAGATTATTGCCAATCACAAACGATCCCATACGGGGGAGAGCAGTGGGAGTGTTTGTAAGAAGCAATGCACTGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAAAGGATTAGCGAGAGGCTGAAGATATTGCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGCTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGAATTTTGGCCTGTTGAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGTTCAAACAGTGAGAAGTGA

Protein sequence

MALANSALQELDGMEKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTILGDKMNNNESLLSFDAQGICQLDQTYNWDDQQRVMEDPNCFQTATNHNNYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

Homology

[Close]

BLAST of ClCG03G008680.1 vs. Swiss-Prot
Match: BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana GN=BHLH86 PE=3 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47
Identity = 125/291 (42.96%), Postives = 163/291 (56.01%), Query Frame = 1


Query: 13  GMEKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTIL 72
           G+++      +  I   H+N N  FVF  +     D          S   F         
Sbjct: 30  GLDEGASASSSSTINSDHQN-NQGFVFYPSGETIEDHNSLMDFNASSFFTF--------- 89

Query: 73  GDKMNNNESLLSFDAQG----ICQLDQTYNWDD---------QQRVMEDPNCFQTATNHN 132
               +N+ SL+S    G    +   + +Y++D            RV++ PN F+T ++  
Sbjct: 90  ----DNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFG 149

Query: 133 NYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVC 192
             S S      N  NG   +WLYS  T    +     E+T   +A +KR  TGE++  + 
Sbjct: 150 LTSNSMSKPATNHGNG---DWLYSGST--IVNIGSRHESTSPKLAGNKRPFTGENT-QLS 209

Query: 193 KKQCTVAAKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 252
           KK  +    K KPK++T+ KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKA
Sbjct: 210 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 269

Query: 253 ISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSS 290
           I YVKFLQ+QVK+LA DEFWP +GGKAPDISQVKEAID ILSS +  S+S+
Sbjct: 270 IGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of ClCG03G008680.1 vs. Swiss-Prot
Match: BH083_ARATH (Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-45
Identity = 102/152 (67.11%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 139 EWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTA- 198
           +WLYS+ T   + +  E+ + +   A +KRSHTGES+    KK  +    K KPK +T+ 
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKS--AGNKRSHTGEST-QPSKKLSSGVTGKTKPKPTTSP 205

Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEF 258
           KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEF
Sbjct: 206 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEF 265

Query: 259 WPVEGGKAPDISQVKEAIDVIL-SSQRERSSS 289
           WP +GGKAPDISQVK+AID IL SSQR+R+S+
Sbjct: 266 WPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of ClCG03G008680.1 vs. Swiss-Prot
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.8e-19
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 1


Query: 155 EAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISE 214
           E+    E   N     +  +S    K   T    K +    TA DPQS+ A+ RRE+I+E
Sbjct: 132 ESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINE 191

Query: 215 RLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 259
           RLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 192 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of ClCG03G008680.1 vs. Swiss-Prot
Match: BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 189 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 248
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295

Query: 249 VKILATDEFW 259
           +K+L++D+ W
Sbjct: 296 IKLLSSDDLW 305

[Close]

BLAST of ClCG03G008680.1 vs. Swiss-Prot
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.3e-18
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 189 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 248
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 249 VKILATDEFW 259
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of ClCG03G008680.1 vs. TrEMBL
Match: A0A0A0KN55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420280 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 3.9e-134
Identity = 257/299 (85.95%), Postives = 268/299 (89.63%), Query Frame = 1


Query: 1   MALANSALQELDGMEKNGG-YLKTLAIGKGHE--NPNSNFVFRNTTNYQLDQQQQQQQQQ 60
           MALANSA+QE+DGMEKNGG YLK+LAIGKGH+  NPN +FVFR+TTNYQL QQQQQ    
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQ---- 60

Query: 61  QSLINFKCGIDNTILGDKMNNNESLLSFDAQGICQLDQTYNWDDQQRVMEDPNCFQTATN 120
            SLINF         G KMNN ESLLSF+AQGICQLD TYNWDDQQRVMEDPNCFQTATN
Sbjct: 61  -SLINF---------GHKMNN-ESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATN 120

Query: 121 HNNYSPSKDHH--NKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHT-GES 180
           HNNYSPSKDHH  NKNGDNGSVYEWLYSE TT FSD+IQEAE TQEI+ NHKRSHT GES
Sbjct: 121 HNNYSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGES 180

Query: 181 SGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 240
           SGSVCKKQCT A KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM
Sbjct: 181 SGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 240

Query: 241 LEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 294
           LEKAISYVKFLQLQVKILATDEFWPV+GGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Sbjct: 241 LEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of ClCG03G008680.1 vs. TrEMBL
Match: B9T2K1_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0285440 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60
Identity = 155/304 (50.99%), Postives = 193/304 (63.49%), Query Frame = 1


Query: 15  EKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQ-QQSLINFKCGIDNTILG 74
           E+    +K LA+   + +   +    N+  +     + Q  +   SLINF+ G D  + G
Sbjct: 41  EEGESNIKNLAMSHSYSSSLGSPSSANSNEFLFHSARHQAHEGAHSLINFRGGYDGFLHG 100

Query: 75  DKMNNNESLLSFD---------AQGICQLDQT--------YNWDDQQ-------RVMEDP 134
                N SLLSF+         + G+ +   T        Y W+          R++E+ 
Sbjct: 101 -----NGSLLSFEQNNKVSSQTSSGLKEDYSTWEVDFNCNYQWNQMNPKSSADPRLVENI 160

Query: 135 NCFQTATNHNNYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIAN-HKR 194
           NCF TA+N N+   S+       D G   +WLYSE T     +IQE   TQ+  AN HKR
Sbjct: 161 NCFHTASNFNSIDNSEKE-----DPG---DWLYSEGTIITDHSIQEP-GTQD--ANFHKR 220

Query: 195 SHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSK 254
            H GES+ +V KKQC  A KKQKPK+S +KDPQSIAAKNRRERISERLKILQELVPNGSK
Sbjct: 221 PHMGESTQAV-KKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSK 280

Query: 255 VDLVTMLEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSS 293
           VDLVTMLEKAISYVKFLQLQVK+LATDEFWPV+GGKAPD+SQVKEAID ILSSQ++R+SS
Sbjct: 281 VDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDVSQVKEAIDAILSSQKDRNSS 327

[Close]

BLAST of ClCG03G008680.1 vs. TrEMBL
Match: A0A067KLM1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13420 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.0e-58
Identity = 147/263 (55.89%), Postives = 175/263 (66.54%), Query Frame = 1


Query: 34  NSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTILGDKMNNNESLLSFDAQGICQL 93
           NSN    ++ N  +  Q ++     SLINF  G DN I     + N SLLSF        
Sbjct: 49  NSNDFLFHSNNSGISNQTEEAH---SLINFAGGFDNFI-----HANGSLLSFQHNNN-NF 108

Query: 94  DQTYNWDD-QQRVMEDPNCFQTATNHNNYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSD- 153
           + +Y  +    R+ ED NCFQTATN N  +        N    ++ +WLY E T    D 
Sbjct: 109 NYSYKCNSVDPRLSEDINCFQTATNSNPMT--------NFGKENIGDWLYCEKTMGTDDD 168

Query: 154 -AIQEAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQK-PKSSTAKDPQSIAAKNRR 213
             IQE+   QE+   HKR + GE+  ++ KKQC  A KK K  K S +KDPQSIAAKNRR
Sbjct: 169 SIIQESGEVQEVNF-HKRPNLGENMQAL-KKQCNSATKKSKITKPSPSKDPQSIAAKNRR 228

Query: 214 ERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVEGGKAPDIS 273
           ERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK+LATDEFWPV+GGKAPDIS
Sbjct: 229 ERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDIS 288

Query: 274 QVKEAIDVILSSQRERSSSSNSE 293
           QVKEAID ILSSQ++R+SSS+S+
Sbjct: 289 QVKEAIDAILSSQKDRNSSSSSK 292

[Close]

BLAST of ClCG03G008680.1 vs. TrEMBL
Match: A0A061EH34_THECC (Rhd six-like 1, putative OS=Theobroma cacao GN=TCM_019210 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 147/304 (48.36%), Postives = 190/304 (62.50%), Query Frame = 1


Query: 9   QELDGMEKNGGYLKTLAIGKG--HENPNS----NFVFRNTTNYQLDQQQQQQQQQQSLIN 68
           +E  G+EK GG +K  +        +PNS       FR    +  + Q     +     N
Sbjct: 33  KEGGGLEKLGGVVKNFSTSSSTSFSSPNSVNSDGLAFRAVNYHPEEAQSLINFKGAGYDN 92

Query: 69  FKCGIDNTILGDKMNNNESLLSF-------DAQGIC--QLDQTYNWDD-------QQRVM 128
           F  G + ++L  + N      ++       D   I    L+Q Y W+          RV+
Sbjct: 93  FMHGTNGSLLSFEQNERVLQNTYLKTSSHKDEYSIWAGSLNQNYQWNQVNPKSSTDPRVV 152

Query: 129 EDPNCFQTATNHNNY-SPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIAN 188
           ED +CF+TA+N N+  S +K++H          +WLYSE     +++IQE+ + +   + 
Sbjct: 153 EDFSCFETASNFNSMTSATKENHG---------DWLYSEAAV-VANSIQESGSPEA--SG 212

Query: 189 HKRSHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPN 248
            KR HTGES+ ++ KKQC+  AKK K KS  +KDPQSIAAKNRRERISERLKILQELVPN
Sbjct: 213 LKRPHTGESNQAL-KKQCSNEAKKAKTKSGPSKDPQSIAAKNRRERISERLKILQELVPN 272

Query: 249 GSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRER 290
           GSKVDLVTMLEKAISYVKFLQLQVK+LATDEFWPV+GGKAPDISQV+EAID ILSSQ++R
Sbjct: 273 GSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQKDR 323

[Close]

BLAST of ClCG03G008680.1 vs. TrEMBL
Match: V4SXU2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013420mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.0e-57
Identity = 151/293 (51.54%), Postives = 193/293 (65.87%), Query Frame = 1


Query: 13  GMEKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTIL 72
           G +K  G++K++ I     +P+S     N+  Y+       ++ + SLINFK G D+ + 
Sbjct: 22  GSKKAPGFVKSIGISNT-SSPSS----ANSNGYEF---HNAEEARDSLINFKSGHDHFMH 81

Query: 73  GDKMNNNESLLSFDAQ------------GICQLDQTYNWDDQQRVMEDPNCFQTATNHNN 132
            +  N    LLSF+                 Q++Q Y+ D   R+MED NCF TA+N+  
Sbjct: 82  ANASN----LLSFEQNETKDDEYSMWEGNFNQINQKYSSD--HRLMEDFNCFDTASNYG- 141

Query: 133 YSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCK 192
           +  +    + +GD      WLY+E T   +D I E+  +Q+  ++ KR +TGES  +V K
Sbjct: 142 FMINNSARDCHGD------WLYTEATA-VTDTILES-GSQDASSSLKRPNTGESMQAV-K 201

Query: 193 KQCTVAAKKQ---KPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 252
           KQC +AA K+   K K+S   KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE
Sbjct: 202 KQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 261

Query: 253 KAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSS 290
           KAISYVKFLQLQVK+LATDEFWPV+GGKAPDISQV+EAID ILSSQR+RSSSS
Sbjct: 262 KAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQRDRSSSS 290

[Close]

BLAST of ClCG03G008680.1 vs. TAIR10
Match: AT5G37800.1 (AT5G37800.1 RHD SIX-LIKE 1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 125/291 (42.96%), Postives = 163/291 (56.01%), Query Frame = 1


Query: 13  GMEKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTIL 72
           G+++      +  I   H+N N  FVF  +     D          S   F         
Sbjct: 30  GLDEGASASSSSTINSDHQN-NQGFVFYPSGETIEDHNSLMDFNASSFFTF--------- 89

Query: 73  GDKMNNNESLLSFDAQG----ICQLDQTYNWDD---------QQRVMEDPNCFQTATNHN 132
               +N+ SL+S    G    +   + +Y++D            RV++ PN F+T ++  
Sbjct: 90  ----DNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFG 149

Query: 133 NYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVC 192
             S S      N  NG   +WLYS  T    +     E+T   +A +KR  TGE++  + 
Sbjct: 150 LTSNSMSKPATNHGNG---DWLYSGST--IVNIGSRHESTSPKLAGNKRPFTGENT-QLS 209

Query: 193 KKQCTVAAKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 252
           KK  +    K KPK++T+ KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKA
Sbjct: 210 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 269

Query: 253 ISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSS 290
           I YVKFLQ+QVK+LA DEFWP +GGKAPDISQVKEAID ILSS +  S+S+
Sbjct: 270 IGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of ClCG03G008680.1 vs. TAIR10
Match: AT1G66470.1 (AT1G66470.1 ROOT HAIR DEFECTIVE6)

HSP 1 Score: 184.5 bits (467), Expect = 9.4e-47
Identity = 102/152 (67.11%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 139 EWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTA- 198
           +WLYS+ T   + +  E+ + +   A +KRSHTGES+    KK  +    K KPK +T+ 
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKS--AGNKRSHTGEST-QPSKKLSSGVTGKTKPKPTTSP 205

Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEF 258
           KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEF
Sbjct: 206 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEF 265

Query: 259 WPVEGGKAPDISQVKEAIDVIL-SSQRERSSS 289
           WP +GGKAPDISQVK+AID IL SSQR+R+S+
Sbjct: 266 WPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of ClCG03G008680.1 vs. TAIR10
Match: AT1G27740.1 (AT1G27740.1 root hair defective 6-like 4)

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-20
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 1


Query: 155 EAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISE 214
           E+    E   N     +  +S    K   T    K +    TA DPQS+ A+ RRE+I+E
Sbjct: 132 ESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINE 191

Query: 215 RLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 259
           RLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 192 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of ClCG03G008680.1 vs. TAIR10
Match: AT4G33880.1 (AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 189 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 248
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 249 VKILATDEFW 259
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of ClCG03G008680.1 vs. TAIR10
Match: AT5G43175.1 (AT5G43175.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-19
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = 1


Query: 141 LYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCKKQCTVAAKKQKPKSSTAKDP 200
           L +EP T + D         + ++++  S   ++ G V     ++  +K K     A DP
Sbjct: 92  LVTEPKTAWRDG--------QSLSSYNSSDDEKALGLVSNTSKSLK-RKAKANRGIASDP 151

Query: 201 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 259
           QS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQLQ+K+L++++ W
Sbjct: 152 QSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLW 200

[Close]

BLAST of ClCG03G008680.1 vs. NCBI nr
Match: gi|449445206|ref|XP_004140364.1| (PREDICTED: putative transcription factor bHLH086 [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 5.6e-134
Identity = 257/299 (85.95%), Postives = 268/299 (89.63%), Query Frame = 1


Query: 1   MALANSALQELDGMEKNGG-YLKTLAIGKGHE--NPNSNFVFRNTTNYQLDQQQQQQQQQ 60
           MALANSA+QE+DGMEKNGG YLK+LAIGKGH+  NPN +FVFR+TTNYQL QQQQQ    
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQ---- 60

Query: 61  QSLINFKCGIDNTILGDKMNNNESLLSFDAQGICQLDQTYNWDDQQRVMEDPNCFQTATN 120
            SLINF         G KMNN ESLLSF+AQGICQLD TYNWDDQQRVMEDPNCFQTATN
Sbjct: 61  -SLINF---------GHKMNN-ESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATN 120

Query: 121 HNNYSPSKDHH--NKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHT-GES 180
           HNNYSPSKDHH  NKNGDNGSVYEWLYSE TT FSD+IQEAE TQEI+ NHKRSHT GES
Sbjct: 121 HNNYSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGES 180

Query: 181 SGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 240
           SGSVCKKQCT A KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM
Sbjct: 181 SGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 240

Query: 241 LEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 294
           LEKAISYVKFLQLQVKILATDEFWPV+GGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Sbjct: 241 LEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of ClCG03G008680.1 vs. NCBI nr
Match: gi|659121136|ref|XP_008460515.1| (PREDICTED: putative transcription factor bHLH086 [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 4.2e-129
Identity = 247/297 (83.16%), Postives = 265/297 (89.23%), Query Frame = 1


Query: 1   MALANSALQELDGMEKNGG-YLKTLAIGKGHE-NPNSNFVFRNTTNYQLDQQQQQQQQQQ 60
           M+LANSA+QE+DGMEKNGG YLK+LAIGKGH+ NPN +FVFR+ TNYQL  QQQQ     
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQQ----- 60

Query: 61  SLINFKCGIDNTILGDKMNNNESLLSFDAQGICQLDQTYNWDDQQRVMEDPNCFQTATNH 120
           SLINF         G KMNN ESLLSF+AQGICQLD TYNWDDQ+RVMEDPNCFQTAT+H
Sbjct: 61  SLINF---------GHKMNN-ESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSH 120

Query: 121 NNYSPSKDHH-NKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSH-TGESSG 180
           NNYSPSKDHH NKNG++GSVYEWLY E TT FSD+IQ+AE TQEI+ NHKRSH TGESSG
Sbjct: 121 NNYSPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSG 180

Query: 181 SVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 240
           SVCKKQCT A KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE
Sbjct: 181 SVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 240

Query: 241 KAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 294
           KAISYVKFLQLQVKILATDEFWPV+GGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Sbjct: 241 KAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of ClCG03G008680.1 vs. NCBI nr
Match: gi|255583421|ref|XP_002532470.1| (PREDICTED: transcription factor bHLH83 [Ricinus communis])

HSP 1 Score: 241.5 bits (615), Expect = 1.8e-60
Identity = 155/304 (50.99%), Postives = 193/304 (63.49%), Query Frame = 1


Query: 15  EKNGGYLKTLAIGKGHENPNSNFVFRNTTNYQLDQQQQQQQQ-QQSLINFKCGIDNTILG 74
           E+    +K LA+   + +   +    N+  +     + Q  +   SLINF+ G D  + G
Sbjct: 41  EEGESNIKNLAMSHSYSSSLGSPSSANSNEFLFHSARHQAHEGAHSLINFRGGYDGFLHG 100

Query: 75  DKMNNNESLLSFD---------AQGICQLDQT--------YNWDDQQ-------RVMEDP 134
                N SLLSF+         + G+ +   T        Y W+          R++E+ 
Sbjct: 101 -----NGSLLSFEQNNKVSSQTSSGLKEDYSTWEVDFNCNYQWNQMNPKSSADPRLVENI 160

Query: 135 NCFQTATNHNNYSPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIAN-HKR 194
           NCF TA+N N+   S+       D G   +WLYSE T     +IQE   TQ+  AN HKR
Sbjct: 161 NCFHTASNFNSIDNSEKE-----DPG---DWLYSEGTIITDHSIQEP-GTQD--ANFHKR 220

Query: 195 SHTGESSGSVCKKQCTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSK 254
            H GES+ +V KKQC  A KKQKPK+S +KDPQSIAAKNRRERISERLKILQELVPNGSK
Sbjct: 221 PHMGESTQAV-KKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSK 280

Query: 255 VDLVTMLEKAISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSS 293
           VDLVTMLEKAISYVKFLQLQVK+LATDEFWPV+GGKAPD+SQVKEAID ILSSQ++R+SS
Sbjct: 281 VDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDVSQVKEAIDAILSSQKDRNSS 327

[Close]

BLAST of ClCG03G008680.1 vs. NCBI nr
Match: gi|645246158|ref|XP_008229223.1| (PREDICTED: putative transcription factor bHLH086 [Prunus mume])

HSP 1 Score: 240.7 bits (613), Expect = 3.1e-60
Identity = 159/292 (54.45%), Postives = 188/292 (64.38%), Query Frame = 1


Query: 30  HENP------NSNFVFRNTTNYQLDQQQQQQQQQQSLINFKCGIDNTILGDKMNNNESLL 89
           HE+P      ++ FVFR T+NY     Q   Q   S+INFK    N+       N+ESLL
Sbjct: 16  HESPQVSSDLSNGFVFRATSNYH----QPDHQVAHSVINFKSSGYNSFF----QNSESLL 75

Query: 90  SFDA---QGICQL----DQTYNWDDQ----------------QRVMEDPNCFQTATNHNN 149
           SF+    Q I +     D+ +N DD                  R+  D NCFQT +N+++
Sbjct: 76  SFEKNSKQNILKTRNDKDEHFNCDDDLHHGNYQWNHTASVSDPRLSGDFNCFQTRSNYSS 135

Query: 150 Y-SPSKDHHNKNGDNGSVYEWLYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVC 209
             + SKD H   GD    Y WLYSE T   +D  QE E+ +     HKR HTGE+   + 
Sbjct: 136 MPNTSKDDH---GDEA--YGWLYSEATV-VADGFQEPESQEGF---HKRPHTGEAMQPL- 195

Query: 210 KKQCTVAA-KKQKPKSST-AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK 269
           KKQCT +  KK KPKSS+  KDPQSIAAKNRRERISERL+ILQELVPNG KVDLVTMLEK
Sbjct: 196 KKQCTNSGTKKPKPKSSSPTKDPQSIAAKNRRERISERLRILQELVPNGCKVDLVTMLEK 255

Query: 270 AISYVKFLQLQVKILATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSS 290
           AISYVKFLQLQVK+LATDEFWPV+GGKAPDISQVKEAID IL+SQR+ SSSS
Sbjct: 256 AISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAILTSQRDTSSSS 289

[Close]

BLAST of ClCG03G008680.1 vs. NCBI nr
Match: gi|470139581|ref|XP_004305526.1| (PREDICTED: putative transcription factor bHLH086 [Fragaria vesca subsp. vesca])

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 151/277 (54.51%), Postives = 180/277 (64.98%), Query Frame = 1


Query: 30  HENPNSNFVFRN----TTNYQLDQQQQQQQQQQSLINFKCGIDNTILGDKMNNNESLLSF 89
           H   N+ FVFR+    T+ YQ D    Q     S+INFK   ++       +N+ SLLSF
Sbjct: 25  HRLSNNGFVFRSAASATSCYQADDDHDQVAAGHSVINFKS--NDYTSSFTHDNSASLLSF 84

Query: 90  DA--QGICQLDQTYNWD---DQQRVMEDPNCFQTATNHNNYSPSKDHHNKNGDNGSVYEW 149
           +     I Q   +YN     D  R   D NCFQTA+ +N+ S +  +     + GS Y W
Sbjct: 85  EKTNNSITQDHDSYNCINSVDPVRHSGDFNCFQTASTYNSSSSNPSNEGHGSELGSAYGW 144

Query: 150 LYSEPTTHFSDAIQEAEATQEIIANHKRSHTGESSGSVCKKQCT-------VAAKKQKPK 209
           LYS+ T   +++  E E TQ   +  KR H GE+   + K+QCT          KK KPK
Sbjct: 145 LYSDATL-MAESFPEPE-TQVGASFQKRPHKGENMQPL-KRQCTSDVSAAAATTKKPKPK 204

Query: 210 SST-AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKIL 269
           SS+ +KDPQSIAAKNRRERISERLKILQELVPNG KVDLVTMLEKAISYVKFLQLQVK+L
Sbjct: 205 SSSPSKDPQSIAAKNRRERISERLKILQELVPNGCKVDLVTMLEKAISYVKFLQLQVKVL 264

Query: 270 ATDEFWPVEGGKAPDISQVKEAIDVILSSQRERSSSS 290
           ATDEFWPV+GGKAPDISQVKEAID ILSSQR+ SSSS
Sbjct: 265 ATDEFWPVQGGKAPDISQVKEAIDAILSSQRDTSSSS 296

The following BLAST results are available for this feature:

BLAST of ClCG03G008680.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH086_ARATH	3.0e-47	42.96	Putative transcription factor bHLH086 OS=Arabidopsis thaliana GN=BHLH86 PE=3 SV=...	[more]
BH083_ARATH	1.7e-45	67.11	Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2 SV=1	[more]
BH054_ARATH	7.8e-19	47.12	Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1	[more]
BH084_ARATH	1.7e-18	61.43	Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1	[more]
BH085_ARATH	2.3e-18	61.43	Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1	[more]

BLAST of ClCG03G008680.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN55_CUCSA	3.9e-134	85.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420280 PE=4 SV=1	[more]
B9T2K1_RICCO	1.3e-60	50.99	DNA binding protein, putative OS=Ricinus communis GN=RCOM_0285440 PE=4 SV=1	[more]
A0A067KLM1_JATCU	6.0e-58	55.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13420 PE=4 SV=1	[more]
A0A061EH34_THECC	1.7e-57	48.36	Rhd six-like 1, putative OS=Theobroma cacao GN=TCM_019210 PE=4 SV=1	[more]
V4SXU2_9ROSI	3.0e-57	51.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013420mg PE=4 SV=1	[more]

BLAST of ClCG03G008680.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37800.1	1.7e-48	42.96	RHD SIX-LIKE 1	[more]
AT1G66470.1	9.4e-47	67.11	ROOT HAIR DEFECTIVE6	[more]
AT1G27740.1	4.4e-20	47.12	root hair defective 6-like 4	[more]
AT4G33880.1	1.3e-19	61.43	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT5G43175.1	3.7e-19	42.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of ClCG03G008680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445206\|ref\|XP_004140364.1\|	5.6e-134	85.95	PREDICTED: putative transcription factor bHLH086 [Cucumis sativus]	[more]
gi\|659121136\|ref\|XP_008460515.1\|	4.2e-129	83.16	PREDICTED: putative transcription factor bHLH086 [Cucumis melo]	[more]
gi\|255583421\|ref\|XP_002532470.1\|	1.8e-60	50.99	PREDICTED: transcription factor bHLH83 [Ricinus communis]	[more]
gi\|645246158\|ref\|XP_008229223.1\|	3.1e-60	54.45	PREDICTED: putative transcription factor bHLH086 [Prunus mume]	[more]
gi\|470139581\|ref\|XP_004305526.1\|	1.2e-59	54.51	PREDICTED: putative transcription factor bHLH086 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG03G008680	ClCG03G008680	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG03G008680.1	ClCG03G008680.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG03G008680.1.cds5	ClCG03G008680.1.cds5	CDS
ClCG03G008680.1.cds4	ClCG03G008680.1.cds4	CDS
ClCG03G008680.1.cds3	ClCG03G008680.1.cds3	CDS
ClCG03G008680.1.cds2	ClCG03G008680.1.cds2	CDS
ClCG03G008680.1.cds1	ClCG03G008680.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 193..253 score: 3.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 204..246 score: 4.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 202..251 score: 1.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 196..245 score: 15
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 194..254 score: 9.95
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 52..284 score: 1.5
None	No IPR available	PANTHER	PTHR16223:SF19	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 52..284 score: 1.5