ClCG03G007830.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCAACTTCTTCTTCTCCTTCTTTCTCACAGTCGCCGACCCCCTCCCTTTCTCAGGGCTTTTCTCCTCCGGCGACGACGCGACATATCCACGAGCACATCTTCAGCGTATTCGACATCGACGAAAAAACCCGCACCTGCCGACGTTCAGCTTTCATAAATCGGCGACAACGTGGGTCTCTTTCTGCCAGTAGTTGCGTCGGCCATCCTCCTTCACGGGAAGATCTGTGATGGCAACACGAATTCATGACGATGAAACCGACGAATCTGACTTGCATTCTGAGCACGACTTTGAACTGCTTCCCCTAGGTTTTCACAGCATCGTTTCTCCTCCATTAGAGACTCCAGCGTGAACAAGTTGTTCATCACGTTTTTGACGATTGGGTGTGTCTTGCAGAAGCGCTTTTGGCTTGGGGAAAGCTTTCAACTGTTACCCACAGTCCGATTGGCTTCAATTAATGTACCCATAACGTTTAAGGTCGACTTCGGACCAGGAAAGTTAGAAGCCTTTTTAGTAAGATTCGGTAAGGATTGTTACTTTAATTCTTGTTCGGATTTTATTCAGGTCTTCATATTAGATTGTAAGTGGTTGGAATTCTATATGGTTATGTTTAGGTAAATTTGTACGTGGTCGAATAAGGTCTGACAAGTTTGAACACATTTTGGACTATTTCGAACTCGAATAAAGTATGTTAGATCAGTTTCTAACATGAAGAAGTTTTCTGTTTGTAGTTTTGGACTATTTCAGGCTGATATCTTGAGGTTTATGGTTGATTTTAGGTAAGGACATCCCTCTTGAACACTCTCAATTTCAATTAAGGTTTCGAATTGAGTTTTAATTTCTAAAATTTATCGTGATTGTTTAGACCTTTCCAGGAAGTTGACATTTGTTCAAGAGGTGGTTTTTTGATTGAGAATTGTAGGATTGTCTATCAAGGTAAGTAGATTCCACATCCCATCCAAAATATAAATTTGACTATTGTGGTTTGATGAATGTAGACTCTAGTAACGTAAGGTTAATCTATTGGTATAGAAGTCCATGCTAGAATATTAAGTTTGGAAAATCCAAAAGAATATTTGGAAGACTGAAATTGAGTGATAGTAACCGGTGTCATGGAAAGATGAAAAATGGCCGATTTCAATCAGTTACACACCGCATTTTCTCATCACTAAGTGACTATGTTCCCTCCTACACTGCAACCCAAATTTCAAACCAAACATCCACTTCTTTGTCATCAGCTCTGCAACATTACATCAATTCAGATGACCCTTCTCATGGCCAAAAGATCCATGCCCATATTCTCAAAACTGGGTTCATACCCAATACAAATATCTCCATTAAGCTCCTCATATTGCACCTGAAATGTGGGTCATTGAAGTTTGCACGCCAAGTGTTCGATGCATTGCCTCAAAAGACTCTTTCGGCTTACAATTATATGATTGGTGGGTACGTAAAGATGGGAAAAGTACCAGAATCCCTCACTCTCGTCCGTGAGCTCATCATTTCAAGTGAAAGGCCTGATGGGTATACATTTTCAATGCTTTTAAAGGCATCTACATGTGCGCGTGGTGACTCTATACCGCGTAGTTTAGGAAGAATGGTCCATGCTCAGGTATTGAAGTCGGATGTGTCACCAGATGATGTACTTTACACGGCGCTTGTTGACTCATACGTTAAAAACGGTGACATATATTTTGCTAGGATGGTGTTTGATTTGATGTTGAAAAAGAATGTGATATGTTCAACATCAATGATTTCAGGATATATGAATCAAGGGTTGGTTGAAGATGCTGAAGAAATTTTTAGCAAGACTGTTGAAAAGGATATAGTTGTATTCAATGCAATGATTGAAGGTTATAGTAAAACGCATGAACATGCCAAGAAATCGCTTGAGGTTTACATTGACATGCAGCGATTGTGTTTTTCACCAAATATTTCAACATTTTCCAGTGTGATTGGTGCTTGTTCAGTGTTGGCAGCATTTGAAACAGGCCAACAAATCCAATGTCAACTTATGAAGACTAAATTCTTCACAGATATCAGAATGGGAAGTGCTCTTCTAGACATGTACTCCAAATGTGGAAGAACGGAAGATGCTCGTCAAGTTTTTGACCAAATGCCAGAAAGAAATGTCTTCTCATGGACGTCTATGATAGATGGATATGGCAAAAATGGATACCCAAGTGAAGCACTTGAGCTACTTTGCATTATGCAAGAGGAACACCAGATTCAGCCGAACTCTGTTACCTTTCTTAGCGCCCTCTCAGCTTGTGCCCATGGAGGGCTAGTAGAGAAAGGCTGGGAAATTTTTGAAAGCATGGAGAGAAACTACTCACTGAAACCAAAAATGGAACATTATGCATGTATGGTTGATCTGCTGGGACGTGCCGGAAGTTTACTTCAGGCATGGGAATTTGTTATGCGAATGCCTGAAACTCCTAATTCTGATGTATGGGCAGCTCTATTGAGCTCAGCAAAGCTTCATGGCAACGTTGAAATGGCCTCAATAGCTGCCAATGAACTATTTAAGCTGAATGCCGACAGTCGACCAGGGGCTTATGTTGCATTGTCTAATACTTTTGCAGAAGCTGGGAAATGGGACAATGTTAGTGAACTGAGAGAGATTATGAAGATAAGAAGAGTTAAATGTAAAGGTAGCAGTTGGGTTGGGGCAGCTGATGGCAGCTTATGACAATGCAGGTTGCTTGTTTTGTCAAATAAGTGTTGTCTAATATAAATGGCTGAATCTTGATGCAGGAATGCTCTTTCCAGATTGCTTTTTGTGTACCTCTGTATATCACTCACTCATTGAAGTTGATAAGATTTTGTAAGTGCCACTGTCATACTTGGTTGGGATCCTGGATTTGAAGCTTTATTTGATTGTTAAGAGGCAGGAATATGGCAGTAGTATAGATTAAGTAGCCCATTCAAGCATTCAAGAAGAGTATTGCTCCAACAATTACCAAGAGGACGGTTTTTGTGCTTAAAAGTCAATGTCTATCAATTGTGCGATTTTGTAATCCCAGAGCTTTATACACATCACCAAAACAACATAAGCGCTTGCTGAGAACATTGTCCATGAATGTTTCTTGTCGATGCTCATTGACAACGTCATAGTAGGTATTGCATAATGTGGTGAAATTTGCAGATTGATGTGGCTGCTGTATTCAAATGTTCTGCATGAGCATTGGAATGACTAACATTCAAAAAGATTTGAGCGAAGGTAGCCGTACACAGAAGGATTCAGCGATGCACCCACATTTTTATCTGAAGAAAAATTTGGATGAGTTATTCATCAAAAGAGATAGCAAACGCCACAAGTTAACCTATCATGGGCCCTTTCAGCTACGAACAGCAAGAGTTGACAATGCCATTGCTTATCCATTCATTTTTGAACTTTTCATGCTTGGTTACAAAGTTCTCCACTGTCCAATTACAATTGAAAAGGCAGGCTGGCACAAGGCGGTACAATGAGATTCATTAGGGAAACGATGTTGGATCATGCTTATAACTGTCTATATTGGCGTTCATCCCAATGAGGAGATTTAGAATTGCTATAAACGATAGTAAAGAGTGATAACATTATGCATGGCAGACTGCAGTTGAATGCTTCTTTGTCAACCTTTCCAGTTATAGTCTAAAAGAAGAGCAATAGATTAGCTTATAATTGATCATGTGTTGCTGCTGTTGTGAGAAATGTAACTGCAGACCTCTTGGGTTTCTTCTCGGCCTGCCTTTTGCCTTTCTCTCCCTCTTCGTTGGCTTTGTCGGTGTTGTTATTTGGATCTTTGGGTTAGTACGTAGTATTACACTTGTGAACATCGAACATCTCTCTCATTTTATGACTGTTTTGTTTTTGGGCTTCTATTTTTTAAAGTTTTGCCAATTCATTTGTTTTTATTTGGTTTCGCAGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTGTGTGTGACTGTGGTAGTTGGGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAGGCTCTTTTTGCTTGAAGATTGAGCATTTATCCAATCTCTACAAGATAATAACAACTTGATCGTTGCCACCAAGCACGTTCAACTAATCAAAGGCATTAATTTCAATTCTTAATTGGTTGAGATGTTTAAGAGTTGATTGGTAATATTCATTGTTTCTTAGTTTTTAATTTTTTAAAAACATAAGCGGTTGATATTGTTCATGTACCTTGTTTTTCATTTTTCAGAATTGTGTAAAATTTTGGTAACAAAACAATACTCCATTTGGGAGTGTTCGGTTTCGATCTTATTTCTCTTGTTTCT CCTCAACTTCTTCTTCTCCTTCTTTCTCACAGTCGCCGACCCCCTCCCTTTCTCAGGGCTTTTCTCCTCCGGCGACGACGCGACATATCCACGAGCACATCTTCAGCGTATTCGACATCGACGAAAAAACCCGCACCTGCCGACGTTCAGCTTTCATAAATCGGCGACAACGTGGGTCTCTTTCTGCCAGTAGTTGCGTCGGCCATCCTCCTTCACGGGAAGATCTGTGATGGCAACACGAATTCATGACGATGAAACCGACGAATCTGACTTGCATTCTGAGCACGACTTTGAACTGCTTCCCCTAGAAGCGCTTTTGGCTTGGGGAAAGCTTTCAACTGTTACCCACAGTCCGATTGGCTTCAATTAATGTACCCATAACGTTTAAGGTCGACTTCGGACCAGGAAAGTTAGAAGCCTTTTTAGTAAGATTCGTTTTGGACTATTTCAGGCTGATATCTTGAGGTTTATGGTTGATTTTAGACCTTTCCAGGAAGTTGACATTTGTTCAAGAGGTGGTTTTTTGATTGAGAATTGTAGGATTGTCTATCAAGGTAAGTAGATTCCACATCCCATCCAAAATATAAATTTGACTATTGTGGTTTGATGAATGTAGACTCTAGTAACGTAAGGTTAATCTATTGGTATAGAAGTCCATGCTAGAATATTAAGTTTGGAAAATCCAAAAGAATATTTGGAAGACTGAAATTGAGTGATAGTAACCGGTGTCATGGAAAGATGAAAAATGGCCGATTTCAATCAGTTACACACCGCATTTTCTCATCACTAAGTGACTATGTTCCCTCCTACACTGCAACCCAAATTTCAAACCAAACATCCACTTCTTTGTCATCAGCTCTGCAACATTACATCAATTCAGATGACCCTTCTCATGGCCAAAAGATCCATGCCCATATTCTCAAAACTGGGTTCATACCCAATACAAATATCTCCATTAAGCTCCTCATATTGCACCTGAAATGTGGGTCATTGAAGTTTGCACGCCAAGTGTTCGATGCATTGCCTCAAAAGACTCTTTCGGCTTACAATTATATGATTGGTGGGTACGTAAAGATGGGAAAAGTACCAGAATCCCTCACTCTCGTCCGTGAGCTCATCATTTCAAGTGAAAGGCCTGATGGGTATACATTTTCAATGCTTTTAAAGGCATCTACATGTGCGCGTGGTGACTCTATACCGCGTAGTTTAGGAAGAATGGTCCATGCTCAGGTATTGAAGTCGGATGTGTCACCAGATGATGTACTTTACACGGCGCTTGTTGACTCATACGTTAAAAACGGTGACATATATTTTGCTAGGATGGTGTTTGATTTGATGTTGAAAAAGAATGTGATATGTTCAACATCAATGATTTCAGGATATATGAATCAAGGGTTGGTTGAAGATGCTGAAGAAATTTTTAGCAAGACTGTTGAAAAGGATATAGTTGTATTCAATGCAATGATTGAAGGTTATAGTAAAACGCATGAACATGCCAAGAAATCGCTTGAGGTTTACATTGACATGCAGCGATTGTGTTTTTCACCAAATATTTCAACATTTTCCAGTGTGATTGGTGCTTGTTCAGTGTTGGCAGCATTTGAAACAGGCCAACAAATCCAATGTCAACTTATGAAGACTAAATTCTTCACAGATATCAGAATGGGAAGTGCTCTTCTAGACATGTACTCCAAATGTGGAAGAACGGAAGATGCTCGTCAAGTTTTTGACCAAATGCCAGAAAGAAATGTCTTCTCATGGACGTCTATGATAGATGGATATGGCAAAAATGGATACCCAAGTGAAGCACTTGAGCTACTTTGCATTATGCAAGAGGAACACCAGATTCAGCCGAACTCTGTTACCTTTCTTAGCGCCCTCTCAGCTTGTGCCCATGGAGGGCTAGTAGAGAAAGGCTGGGAAATTTTTGAAAGCATGGAGAGAAACTACTCACTGAAACCAAAAATGGAACATTATGCATGTATGGTTGATCTGCTGGGACGTGCCGGAAGTTTACTTCAGGCATGGGAATTTGTTATGCGAATGCCTGAAACTCCTAATTCTGATGTATGGGCAGCTCTATTGAGCTCAGCAAAGCTTCATGGCAACGTTGAAATGGCCTCAATAGCTGCCAATGAACTATTTAAGCTGAATGCCGACAGTCGACCAGGGGCTTATGTTGCATTGTCTAATACTTTTGCAGAAGCTGGGAAATGGGACAATGTTAGTGAACTGAGAGAGATTATGAAGATAAGAAGAGTTAAATGTAAAGGTAGCAGTTGGGTTGGGGCAGCTGATGGCAGCTTATGACAATGCAGGTTGCTTGTTTTGTCAAATAAGTGTTGTCTAATATAAATGGCTGAATCTTGATGCAGGAATGCTCTTTCCAGATTGCTTTTTGTGTACCTCTGTATATCACTCACTCATTGAAGTTGATAAGATTTTGTAAGTGCCACTGTCATACTTGGTTGGGATCCTGGATTTGAAGCTTTATTTGATTGTTAAGAGGCAGGAATATGGCAGTAGTATAGATTAAGTAGCCCATTCAAGCATTCAAGAAGAGTATTGCTCCAACAATTACCAAGAGGACGGTTTTTGTGCTTAAAAGTCAATGTCTATCAATTGTGCGATTTTGTAATCCCAGAGCTTTATACACATCACCAAAACAACATAAGCGCTTGCTGAGAACATTGTCCATGAATGTTTCTTGTCGATGCTCATTGACAACGTCATAGTAGGTATTGCATAATGTGGTGAAATTTGCAGATTGATGTGGCTGCTGTATTCAAATGTTCTGCATGAGCATTGGAATGACTAACATTCAAAAAGATTTGAGCGAAGGTAGCCGTACACAGAAGGATTCAGCGATGCACCCACATTTTTATCTGAAGAAAAATTTGGATGAGTTATTCATCAAAAGAGATAGCAAACGCCACAAGTTAACCTATCATGGGCCCTTTCAGCTACGAACAGCAAGAGTTGACAATGCCATTGCTTATCCATTCATTTTTGAACTTTTCATGCTTGGTTACAAAGTTCTCCACTGTCCAATTACAATTGAAAAGGCAGGCTGGCACAAGGCGGTACAATGAGATTCATTAGGGAAACGATGTTGGATCATGCTTATAACTGTCTATATTGGCGTTCATCCCAATGAGGAGATTTAGAATTGCTATAAACGATAGTAAAGAGTGATAACATTATGCATGGCAGACTGCAGTTGAATGCTTCTTTGTCAACCTTTCCAGTTATAGTCTAAAAGAAGAGCAATAGATTAGCTTATAATTGATCATGTGTTGCTGCTGTTGTGAGAAATGTAACTGCAGACCTCTTGGGTTTCTTCTCGGCCTGCCTTTTGCCTTTCTCTCCCTCTTCGTTGGCTTTGTCGGTGTTGTTATTTGGATCTTTGGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTGTGTGTGACTGTGGTAGTTGGGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAGGCTCTTTTTGCTTGAAGATTGAGCATTTATCCAATCTCTACAAGATAATAACAACTTGATCGTTGCCACCAAGCACGTTCAACTAATCAAAGGCATTAATTTCAATTCTTAATTGGTTGAGATGTTTAAGAGTTGATTGGTAATATTCATTGTTTCTTAGTTTTTAATTTTTTAAAAACATAAGCGGTTGATATTGTTCATGTACCTTGTTTTTCATTTTTCAGAATTGTGTAAAATTTTGGTAACAAAACAATACTCCATTTGGGAGTGTTCGGTTTCGATCTTATTTCTCTTGTTTCT ATGTGTTGCTGCTGTTGTGAGAAATGTAACTGCAGACCTCTTGGGTTTCTTCTCGGCCTGCCTTTTGCCTTTCTCTCCCTCTTCGTTGGCTTTGTCGGTGTTGTTATTTGGATCTTTGGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTGTGTGTGACTGTGGTAGTTGGGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAG MCCCCCEKCNCRPLGFLLGLPFAFLSLFVGFVGVVIWIFGSVLSCICPCCLCVTVVVGFALALINAPILVMKWFTSKIPC
BLAST of ClCG03G007830.1 vs. TrEMBL
Match: A0A0A0LV60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G478070 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 3.2e-38 Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TrEMBL
Match: A0A0D2UNA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G164200 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.2e-32 Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TrEMBL
Match: A0A0B0MX65_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09431 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.2e-32 Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TrEMBL
Match: A0A151R3J1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_041720 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 8.4e-31 Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TrEMBL
Match: A0A059C6S9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02672 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.1e-30 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TAIR10
Match: AT2G31090.1 (AT2G31090.1 unknown protein) HSP 1 Score: 118.6 bits (296), Expect = 1.7e-27 Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. TAIR10
Match: AT2G20562.1 (AT2G20562.1 unknown protein) HSP 1 Score: 103.6 bits (257), Expect = 5.8e-23 Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. NCBI nr
Match: gi|659068158|ref|XP_008443051.1| (PREDICTED: uncharacterized protein LOC103486760 [Cucumis melo]) HSP 1 Score: 167.5 bits (423), Expect = 9.2e-39 Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. NCBI nr
Match: gi|449462643|ref|XP_004149050.1| (PREDICTED: uncharacterized protein LOC101203267 [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 4.6e-38 Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. NCBI nr
Match: gi|823224811|ref|XP_012445185.1| (PREDICTED: uncharacterized protein LOC105769242 [Gossypium raimondii]) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-32 Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. NCBI nr
Match: gi|728820041|gb|KHG03536.1| (hypothetical protein F383_09431 [Gossypium arboreum]) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-32 Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of ClCG03G007830.1 vs. NCBI nr
Match: gi|1009106327|ref|XP_015873921.1| (PREDICTED: uncharacterized protein LOC107410941 [Ziziphus jujuba]) HSP 1 Score: 143.7 bits (361), Expect = 1.4e-31 Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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