ClCG03G000330.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATGTAAGTTATTTCCTAATTATTAACATCAGTTTGATAGCTATATTTAAAATTAGTTTGTGTAATAATGTTGTTAAGTAGATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGTGAATAATAAATATATCAACCCTTTCATTTAAACAATACCTACAGTTTTATTTATTTATTATTTTTTTAATCTTTGTTTGATACCCGTTTTAACTTGGGTAATTGATTTAAATGATAAAATTGATTGAAATATTTTTAAATATAACAAAATGTCACCGTTTATTCGTGATAGACAACGATAGACAGTAATAAAATACTATTATCATCTATCACTATCCATCCGTCTATCCATTGTATGTCTATTACTAATAGACAATAACATTTTGTTGTATTTCTAAATAAATTGTGTTATTTTTTTATGTTTAAAAACACAACTATTTTATATTTATTATTTTTTTTTTTAAGTTTTTTAATTTTAGCTCGGTTGTTGAAGATATTTTTAAAAAGTAGATGATAAAAGAGAAAACATGTAGCTATATAAACTTGATTTTCAATATATATATTATTTTACAACAATTTTTTTTTTTAGTTTTTAGTTTTTGAAATTTATGTTTCCTTTCTCATCAATTCTATACTATGATTTTCACATGTTCTTTCAAAAAACAAAAAATCACTTGAATTCTTAGTCAAATTATAAAAATAAAAATTACTTTTTTTAAATTAATTTTTTAGTTTTCAAAACTTGACTTAATTTTTTGAAAACCTAGGTCAAAAGTGTATTAAAAAAAACTTACATGGGGGAGTTGTGTTTTATAAAATTAATTTTCAAAAACTAAAAAACCTAAACCAAGACCCCTTTTGATAATCATTTTGTTCTTAATTTCCACACAATTATTTGATAAGTTTTTCAACGTCTTAATTTTTAAAAATTCTAAATAAGCAAAATTCCAAAAATAAAATCTAAGTTTTCTCAAAAGTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTCAAAATTTTACTTAGATTTTGAAATCACACTTAAAAAATTCAAATAGGGTAAAGAAGTAAGAAAAGTATAAAAAAATTGTGAATAATAAGCTTAATTATTGCAAATAAAGTAGGTACAAAACGAAGTGTAAATAGTTATCCAACAAAGTATAATTAAAAACGAAACGATTATCAACGGGATTAGTTTGAAGTTTGGAGGTGAAGAAGGTGTTTTTGTGTTTGACAGGGGCGTTTTGTGAAGACTGTTGAATGA ATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGGGCGTTTTGTGAAGACTGTTGAATGA ATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGGGCGTTTTGTGAAGACTGTTGAATGA MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQPDYHFHHHGQGGVMENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKGRFVKTVE
BLAST of ClCG03G000330.1 vs. Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17 Identity = 58/154 (37.66%), Postives = 73/154 (47.40%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. Swiss-Prot
Match: COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 6.7e-17 Identity = 76/194 (39.18%), Postives = 94/194 (48.45%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. Swiss-Prot
Match: COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-16 Identity = 59/157 (37.58%), Postives = 76/157 (48.41%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. Swiss-Prot
Match: CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14 Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. Swiss-Prot
Match: COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13 Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TrEMBL
Match: A0A0A0LYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533540 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51 Identity = 111/162 (68.52%), Postives = 124/162 (76.54%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TrEMBL
Match: M5WE79_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018053mg PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.2e-30 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TrEMBL
Match: A0A067LLV7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17347 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.1e-29 Identity = 71/102 (69.61%), Postives = 79/102 (77.45%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TrEMBL
Match: B7FH76_MEDTR (CCT motif protein OS=Medicago truncatula GN=MTR_5g072780 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.9e-28 Identity = 67/94 (71.28%), Postives = 75/94 (79.79%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TrEMBL
Match: D7SJR7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07210 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.7e-28 Identity = 70/94 (74.47%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TAIR10
Match: AT1G07050.1 (AT1G07050.1 CCT motif family protein) HSP 1 Score: 105.5 bits (262), Expect = 3.0e-23 Identity = 76/191 (39.79%), Postives = 101/191 (52.88%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TAIR10
Match: AT5G14370.1 (AT5G14370.1 CCT motif family protein) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TAIR10
Match: AT1G73870.1 (AT1G73870.1 B-box type zinc finger protein with CCT domain) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18 Identity = 58/154 (37.66%), Postives = 73/154 (47.40%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TAIR10
Match: AT1G25440.1 (AT1G25440.1 B-box type zinc finger protein with CCT domain) HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18 Identity = 76/194 (39.18%), Postives = 94/194 (48.45%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. TAIR10
Match: AT1G68520.1 (AT1G68520.1 B-box type zinc finger protein with CCT domain) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17 Identity = 59/157 (37.58%), Postives = 76/157 (48.41%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. NCBI nr
Match: gi|700210751|gb|KGN65847.1| (hypothetical protein Csa_1G533540 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51 Identity = 111/162 (68.52%), Postives = 124/162 (76.54%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. NCBI nr
Match: gi|694387629|ref|XP_009369559.1| (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 [Pyrus x bretschneideri]) HSP 1 Score: 139.4 bits (350), Expect = 5.3e-30 Identity = 78/149 (52.35%), Postives = 98/149 (65.77%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. NCBI nr
Match: gi|657985270|ref|XP_008384739.1| (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Malus domestica]) HSP 1 Score: 139.4 bits (350), Expect = 5.3e-30 Identity = 78/149 (52.35%), Postives = 98/149 (65.77%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. NCBI nr
Match: gi|359478521|ref|XP_002274679.2| (PREDICTED: zinc finger protein CONSTANS-LIKE 7 [Vitis vinifera]) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29 Identity = 83/164 (50.61%), Postives = 106/164 (64.63%), Query Frame = 1
BLAST of ClCG03G000330.1 vs. NCBI nr
Match: gi|595832018|ref|XP_007206389.1| (hypothetical protein PRUPE_ppa018053mg [Prunus persica]) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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