ClCG02G018370.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGGTTAAAGACTTCAGATTTGTCGTTCTGAATTGAGAACCCTTTGGCCCTTTTTACATATTCAAGGTAACATTTTTGCTCTATAGTTAATTTGCGCCATTGTTCGATCAAACTTGAGAAATTATGTGTTTGATTGTTGGAGAAAGAAAGGGGTTTAAATGAGAGAATAGAAATGAGCATTGCTCGTGTTCATATTTTGTTTTACGATCATTTTGTGCAAACCCATGTCAGAATGTTTCTGAATCACAAAGAATTAGTTCCTCAAATTGTTTTGGTTAATTCTTTTCAGCTATGTCAGTGTTTCTAAATATATTAATTAAATATGTTTCTATCCAAAAAAATAATAATAATAAATTTAAGCCCTCTGTCTAGATATTGTATCTCAGTTTTTGGTTTTGTGAGGAAGAAGGAATGAGATGTGCTAGACGGAATGTGTTCGTCCTAAGAGCTCTAGGTCTGGCTTGCTGGTATGCAAATGAAATTATTTGGCAAAAGATGTTGGTCAGATAAGTTATTGTTTATTATGAATTTTATAATCCTGTTTGAGTTTCTGAATTGTCCTGTTCAGAGAGAAAGTGTTGTTCTAACTTCAAAGATTTCTACTAATTATATGAGATAACTACCTAAAAGTTCTAGGGGTTGCTGTAATCAGAGACTTAGAAAGATTGAGGCTTTAAGGTAGGCCACTTGGATCAGTTGACTAGGTGAATAGGGGTTTGCTTAGTAGAGGTTCTAATATGATGGATAGTTTTGTCAAATCTCTTGTAGCTGAAATTATTTATGATGATCTTAATAGAATGCAATGGCTCTCTTTCTTCAGGTATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCAGTTCTTATTGTGTCTGCTTTTCTTTTCCTTTTTGTGATGATGGTGTTATTTCGCAAGGAGTCTCAAGAACATGATCTTTTAGTTGAGGCGACTCCAAAGCAAAAGTGGGATAGCTTCAGCTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAATTCCTGATTCTCCGAAGGCTGTTTTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGATAAATCTCCGGGATGCCCTTTTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTTCATGCTCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACATTGGTGGGTTGAAAAGAACAAGCTCGAGAAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCGGTACTGGCCACTAAGTTGAAATTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTTTGTTTGTCCACATGCCGAAAGATAATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGTTCTGTCGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGAATGCTCAAAGATGGTCGTGCAACACAGTGGAAAGAAGCCCTCAAGACAAGTGGGATTAGTTTACCCGAAAATAGTTTAACCAATCACATTCAAGAAGAGTTGAATCTCGCCTTTGCATACCACGAAATGACTAGCTTACAGGCTGACAAGATTTTCACGTGGTTTGAATCTCACTTGAGATGATTCTGTCAACATTTAAAGAAAACCCAGGTTCTTGTGACCAACACCTTCCCAAACACACACAGACACTAAAGTGCACGCATAAGAAGAAAATGTACAGAGAACAGTCTTTCGTCGACATTTTTTGTAATGCTAGCAATGTTTTGTATTCGTATTTACACTGTTCAGTTAAGAAAGTTGAAGTAAG CTGGGTTAAAGACTTCAGATTTGTCGTTCTGAATTGAGAACCCTTTGGCCCTTTTTACATATTCAAGATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCAGTTCTTATTGTGTCTGCTTTTCTTTTCCTTTTTGTGATGATGGTGTTATTTCGCAAGGAGTCTCAAGAACATGATCTTTTAGTTGAGGCGACTCCAAAGCAAAAGTGGGATAGCTTCAGCTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAATTCCTGATTCTCCGAAGGCTGTTTTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGATAAATCTCCGGGATGCCCTTTTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTTCATGCTCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACATTGGTGGGTTGAAAAGAACAAGCTCGAGAAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCGGTACTGGCCACTAAGTTGAAATTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTTTGTTTGTCCACATGCCGAAAGATAATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGTTCTGTCGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGAATGCTCAAAGATGGTCGTGCAACACAGTGGAAAGAAGCCCTCAAGACAAGTGGGATTAGTTTACCCGAAAATAGTTTAACCAATCACATTCAAGAAGAGTTGAATCTCGCCTTTGCATACCACGAAATGACTAGCTTACAGGCTGACAAGATTTTCACGTGGTTTGAATCTCACTTGAGATGATTCTGTCAACATTTAAAGAAAACCCAGGTTCTTGTGACCAACACCTTCCCAAACACACACAGACACTAAAGTGCACGCATAAGAAGAAAATGTACAGAGAACAGTCTTTCGTCGACATTTTTTGTAATGCTAGCAATGTTTTGTATTCGTATTTACACTGTTCAGTTAAGAAAGTTGAAGTAAG ATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCAGTTCTTATTGTGTCTGCTTTTCTTTTCCTTTTTGTGATGATGGTGTTATTTCGCAAGGAGTCTCAAGAACATGATCTTTTAGTTGAGGCGACTCCAAAGCAAAAGTGGGATAGCTTCAGCTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAATTCCTGATTCTCCGAAGGCTGTTTTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGATAAATCTCCGGGATGCCCTTTTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTTCATGCTCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACATTGGTGGGTTGAAAAGAACAAGCTCGAGAAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCGGTACTGGCCACTAAGTTGAAATTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTTTGTTTGTCCACATGCCGAAAGATAATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGTTCTGTCGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGAATGCTCAAAGATGGTCGTGCAACACAGTGGAAAGAAGCCCTCAAGACAAGTGGGATTAGTTTACCCGAAAATAGTTTAACCAATCACATTCAAGAAGAGTTGAATCTCGCCTTTGCATACCACGAAATGACTAGCTTACAGGCTGACAAGATTTTCACGTGGTTTGAATCTCACTTGAGATGA MVKHGNKSKAWYKQQTISVLIVSAFLFLFVMMVLFRKESQEHDLLVEATPKQKWDSFSSLVQFNPKREFRNGTDIISQIPDSPKAVLFFAHGCNGKAVNFWDKSPGCPFCVGLPEERLIVLHALSRHFAVLTISSSQKCWTLGKELAVVKDIIHWWVEKNKLEKLPLVGLGASSGGYFLSVLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDNFRQQKINENMEFLKGKGIDVAEIECLEFVLSPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATQWKEALKTSGISLPENSLTNHIQEELNLAFAYHEMTSLQADKIFTWFESHLR
BLAST of ClCG02G018370.1 vs. TrEMBL
Match: A0A0A0KH09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G178940 PE=4 SV=1) HSP 1 Score: 661.8 bits (1706), Expect = 4.7e-187 Identity = 321/344 (93.31%), Postives = 335/344 (97.38%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. TrEMBL
Match: M5X049_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020882mg PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 5.8e-129 Identity = 228/348 (65.52%), Postives = 276/348 (79.31%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. TrEMBL
Match: A0A061DLM8_THECC (Secretion-regulating guanine nucleotide exchange factor OS=Theobroma cacao GN=TCM_001852 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 3.3e-124 Identity = 219/346 (63.29%), Postives = 270/346 (78.03%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. TrEMBL
Match: A0A067LEY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00158 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 9.6e-124 Identity = 220/349 (63.04%), Postives = 273/349 (78.22%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. TrEMBL
Match: A0A059A0Z9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01197 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 8.1e-123 Identity = 221/348 (63.51%), Postives = 272/348 (78.16%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. TAIR10
Match: AT3G58800.1 (AT3G58800.1 unknown protein) HSP 1 Score: 376.7 bits (966), Expect = 1.5e-104 Identity = 191/327 (58.41%), Postives = 244/327 (74.62%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. NCBI nr
Match: gi|449450852|ref|XP_004143176.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X1 [Cucumis sativus]) HSP 1 Score: 661.8 bits (1706), Expect = 6.7e-187 Identity = 321/344 (93.31%), Postives = 335/344 (97.38%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. NCBI nr
Match: gi|778713742|ref|XP_011657111.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X2 [Cucumis sativus]) HSP 1 Score: 652.9 bits (1683), Expect = 3.1e-184 Identity = 317/340 (93.24%), Postives = 331/340 (97.35%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. NCBI nr
Match: gi|659112893|ref|XP_008456356.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo]) HSP 1 Score: 643.7 bits (1659), Expect = 1.9e-181 Identity = 315/344 (91.57%), Postives = 330/344 (95.93%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. NCBI nr
Match: gi|659112903|ref|XP_008456361.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo]) HSP 1 Score: 643.7 bits (1659), Expect = 1.9e-181 Identity = 315/344 (91.57%), Postives = 330/344 (95.93%), Query Frame = 1
BLAST of ClCG02G018370.1 vs. NCBI nr
Match: gi|659112907|ref|XP_008456364.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X3 [Cucumis melo]) HSP 1 Score: 634.8 bits (1636), Expect = 8.8e-179 Identity = 311/340 (91.47%), Postives = 326/340 (95.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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