ClCG02G007540.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATGATAATTTCATCAACACGCTCTCTCCAGTGGCATAATTCTCCAACGGATCTTAAAGGATTCGAATTTAGTGGCCCATCTGCAACCCGATCCCTCAACTTGGCGTTTTTCTTCCAAAATCAGAATCTCTTTTTCACTTCCAAAATCAGAAAGTTTTCCATTGTTTTTACTTCCTTCTGACATCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTTCAGTTACGGGACCTGGGAAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGCGCCTCCCCTCTCGGCAGCGTCTTCAGCCCCGTTTCTGAGGAGGATGCCGTCGCCGCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCCCCGTATGTAAATTCATTCTGTTTCTCTGAGAATGAGGGTGGATATCTACGATGATTCTGTTTGTTTACTCGAAGTTTTGTATTGCGTTTTGTTTTGTTTTGTTTTTTAATGTTGAGATTGGTTTAGGTAAATGGGAGATGAAACAATGGTCAAAATTGCAACGTTTGTTCAAGTTTGATGTTTAATGGGATGTTGTTGAAAGTTTAGGTATTTGGCTAACCTGCCAAAGGCTTTGGGAAATTATATAGAGGTTTTTGTACGATGACCAATCTCAGATGCTTTAACGCGAAATGACCCAATCCTAAAAAAATGAATGAAAACTAATCTTGAACCCATGCCACAGACTACTATCGCAATAGCCCTCTTTCCCATCGCCAAATAATTGGCGCTTAATGCAATATTCATTTCAATCGTGATTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTAATCAACTGTCGTTTTCTTTAAATCACAGGTGATTAAAAATGAAAGTTGTGTTAGGGCTCTGACCATTTTGCGATGGTTGAAAAGTTCCTAACGCGATAATAATTGGTGAAATGTTCTATAACGTAAGTAGGAGGTTAGTTTTTATTGATTTTTTAGAATTGGGTTATTCAACGTTAACGTCGCAGTAATTAGCTCATCCGTACAAAAATCTTAAATTTTATATATCATTTCTTTTTATATGTCTAATTCATCGGCAATGATATGGAATGGTTTGCTTGTTTAGTTATCTTCTCTAGTACTTAATTTGGGGTTGCCTCGTTTACTACATGGATGAAGGTACTATGGTAGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTGAAAGCTCTAGGAGTTCCAAGGAGTGAGTATATTGTGTCAACAAAGTGTGGGAGATATGGTGACGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGACTACAACTAGATTATGTCGATATACTGCATTGCCATGATATTGAATTTGGATCTCTTGATCAGGTGTGTAACTTGTCTGATGTTTGTTACTTTTCTCAAGAACTTACTCACCATTGACTCTTAGTTTTTAATATGGTCATGTGACCTTTTGTTTTATTGGTTACAACTTTATCCTTGAGTTCTAAATAGTTATTAACATGGTTATTGTCATTATAATATAAAAGAAACAATGGATCTTCAGCCGCTTAAGTTTATTTCAGGTTGTGAATGAGACGGTTCCTGCACTTCAAAAGCTAAAGGAAGCTGGGAAGACTCGTTTCATTGGTATTACAGGACTTCCATTGGAAATATTTACATATGTGCTCGATCGAGTACCACCTGGCACCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACACTGTTAGATTTGCTACCTTACTTGAAGAGTAAGGGAGTTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACCGATCATGGTCCCCCAGAATGGCACCCGGCTTCACCAGAATTGAAGGTATAGTTCCTCACCCCTTTTCTTTCATTGGCTTGGAAGTTGAATTGTGAAACTTAAAAGCTTGAGCAGGGAAAGCTCTTTCAGTTGATTAATGTCATGTAAAGAAGACACATTTGTCTGGAGGAGTACATTTCTCGTCGGCTACTCTGATGAGGTTTAGGTCCCATTGTGGAAAAATTTTATCTCGTGAAATGAAAATAATTTATAGGTATTGATTATACTATGCACTAATGACTAGTTCGTTCAACCATACCAGCTAATCCAAAACCATTTGTTCTAGTGCTGTGATTTTTTCTTTTATGTGTCCAACTCTGTTTTGTTTGAGCTTTGGCTTTACATAATTTGAATGATATTGTTCTCTTATTTAAATTCCAACAGTCTGCATGTCAAGCTGCAGCTGCTCATTGTAAAAAGAAGGGAAAAAACATTTCAAAGTTAGCCCTCCAATACAGTCTGGCAAACAAAGATATTTCAACAGTGCTGGTTGGCATGAACTCTGTCAGACAGGTATCTCTCAATAATCTCATTGTTTTTTTTTTTTGGGGGGGGGGAAGCGAATCTCATTGTTTGGTATTCTCTTTCAATATTAATTTCAATATCTTTGAGTCCAATCTCCAGTTTTGAAGACCGTGAATTGTCCCTGTGCCATCGTACATATAGTCATTATGTATCCATTAGTTGTACTTGTACTTCTGTGGCCACTTTTTTGTTAAAAAAACTTGTCTCCACACCAGGTAGGAGGAAGTTCTTATTTTTTGATATGGTTTATCTGGATGCACTTATTAAATGTAATGAAAATATACCAATACAAGTAGGCCACACAAGTTGTAAGAGGTGAGTTTTGTTTTACTTGTGAGAGTTAAGAAAAAGTAAAAAAAGAAAAAAGGAAAAAAAGAATGAAAGACTTCATTGATTCTATGTTTTTAAATGGCAAAGTACTTAATTAACCCTATTTAATGGATGAGCTTTAGGCAAGGACAACAGATTTGAAAATACTGACTTGAAAGAAAGATAGACAAAAAAGAACATTTGTGTTACGAACTCGGCAATTAAAGAATACAAAAGAACGCAAAATATAGGGAAGATCGACACACAAATTTATGTCATTCACTAACAATGTGTTAGTTACGTCCACATAACAGAGGGAGAACAATTTTATTAGAGAGAATGGTACAAGATTATAGAATATCACAAAATGAAAAATGTCTATAGGGTTAGAGAATTTATATAATGTATTTCTCTAAACCCTAGGTGGGAGAAGGAAAATATTTAAATAATTAAATATATCAAATACCAATGCTAATTAGATTTAGGATTCAAGACATTTCAACAAATCTCCACCTTGACTTGAATTCTCTCATAGATAATAGATGTACTAGATGCAACATAAAACACATTGCCAGATGTACCCAGACTTCTTCCACATGCCTTAGATTGTCTCGGAAGAGACCACTAATAATTCAAAATATTTAGCAAGTCCAAGCAATGTTGAAACTTGCTATGTGGAACCGATTGGTGAACATATCAACAAGATTATCTCATCCCCCATAGTAGCAAGCCACTGAGCAAACTTACTACACGAAATAGGTTCTTTATAGGTGGATGACTCATGAGGATCCACCTTTTCAGCAATTTGTAGTGCATAATTCACCATATCTTCAAAACCATACCTCTTTGGAGGCCAGCTCCAACTCTTCTAACTCTATCACGAGCTATACTTGGTTGATCTATTTGTTGACTAGAATTCTCAGGCATAACATTTTTTGACATTTCAGTCACCTCAGTTTCTGGTAGCACAATAGTTTATGTAGTGTTAGTGTTGATCTTCTCCACCTTGGTGTTGTAATTCATTCACAGTTGAAGTGAATTGCATCTCCACTCGTTTATCAACACTACTACTCTCTCCTACACCAGTAAACATCATAACAGACTTTACATTTGAGTTAAGCATGAAATTCTCATCAAAGATCACATTCCTACTGAGTATAACTCTCTAGAAGGTAACAAAACTCTATATCCCTTAACTCCATCCCCAAAGCCAACAAATATACCTTTTTTAGCTCTTGGTTCTAATTTACCTTCATTAACATGATAGTAAACAGTACAACAAAAAACCTTTAATAAATAACTCCACGTAATTCTTTTCTCAAATTACCTCTTGTGTATTTCCTTTCTTGCCCCTTCTCTTATAAGTGTGAATGAACGGACGTCCAATATGATCAAGACTGTAGTAGAATTGCAAAAATGATTAGAAAGAGAGAATCAAGGAGAGATTAATTGGAGTTTCCTGTTGATACGGATCGTCTCTTCCTATGTGTCAAATTCCTTTTCATTTTTCTAGAAAAGTTGGGAGTTTCTTGTTGCTAGTTTGAATACGACTAGTAAGCTTGTTTTTAGAAGTATAATTTCCATCCTATATTCCTATCTAGAATGTTAAAATCTTATGAACTTTTATACGACCAAATATTACAAAGTTGGAAATCAGTAAGATTAGATGAGGTGCGTCTAAGTTGGTCCAAATGCTCATGAAAATTATTCTCTTACAATGTTAGTTTCCAAACTAGTTCCTAAGTCGGCTGACTTAAATATAACATTCTAACCAAGTTCTAAAAATTTGGAAGCAGGTGGAGGAAAACGTAGCTGCTGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTGTCGGAGGTTGAAGCTATCCTTATCCCCGTCAAGAATCAGACATGGCCAAGTGGAATCCAAAAGAGCTGATGTTTTAGCCGCTGCTTGGTATGTGTAACATATTTTTTCTTTTAATAATGAATAACAGAAGTTTCATTGAGAATAAATGAAAGAATATAAAGGCAACTATCATGTGTACCATGCTCATATGAGTGTAGATCGACTGTTGTATTTAACTTGATTCAAACCATCATGTTGGAGCTCCATTCTCATCTGTAGACATTGATTAGACAAGGCCGACATCGTTTCACGACTCAGATGTATATCCAATTTTCTTTTGATCCTATATCTCCCCCTTTGCAGTTTTGTTTTGTGTCAATTTAACTGTGTAAATGATTTATGAGGTTATTCCTTTCCTCGCTATCTCGCTATCATGCCTGTGGGATACCTCATTGCTCTGGTGATTGGACTGATTAGTGTTGTATCAATTTGGTCCTGTTTGGTCAACTGGAA ATTTATGATAATTTCATCAACACGCTCTCTCCAGTGGCATAATTCTCCAACGGATCTTAAAGGATTCGAATTTAGTGGCCCATCTGCAACCCGATCCCTCAACTTGGCGTTTTTCTTCCAAAATCAGAATCTCTTTTTCACTTCCAAAATCAGAAAGTTTTCCATTGTTTTTACTTCCTTCTGACATCTTCATCGGAATCAATGGCGGCTTCTTATCCCAAGCTTCAGTTACGGGACCTGGGAAACACCGGCCTCAAAACCAGCAGTGTCGGCTTTGGCGCCTCCCCTCTCGGCAGCGTCTTCAGCCCCGTTTCTGAGGAGGATGCCGTCGCCGCCGTTCGTGAAGCCTTTCGTCTTGGCATCAACTTCTTCGACACCTCCCCGTGATTAAAAATGAAAGTTGTGTTAGGGCTCTGACCATTTTGCGATGGTTGAAAAGTTCCTAACGCGATAATAATTGGTGAAATGTTCTATAACGTACTATGGTAGGACCTTATCAGAAAAGATGCTTGGTAAGGGACTGAAAGCTCTAGGAGTTCCAAGGAGTGAGTATATTGTGTCAACAAAGTGTGGGAGATATGGTGACGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGACTACAACTAGATTATGTCGATATACTGCATTGCCATGATATTGAATTTGGATCTCTTGATCAGGTTGTGAATGAGACGGTTCCTGCACTTCAAAAGCTAAAGGAAGCTGGGAAGACTCGTTTCATTGGTATTACAGGACTTCCATTGGAAATATTTACATATGTGCTCGATCGAGTACCACCTGGCACCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACACTGTTAGATTTGCTACCTTACTTGAAGAGTAAGGGAGTTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACCGATCATGGTCCCCCAGAATGGCACCCGGCTTCACCAGAATTGAAGTCTGCATGTCAAGCTGCAGCTGCTCATTGTAAAAAGAAGGGAAAAAACATTTCAAAGTTAGCCCTCCAATACAGTCTGGCAAACAAAGATATTTCAACAGTGCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCTGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTGTCGGAGGTTGAAGCTATCCTTATCCCCGTCAAGAATCAGACATGGCCAAGTGGAATCCAAAAGAGCTGATGTTTTAGCCGCTGCTTGGTATGTGTAACATATTTTTTCTTTTAATAATGAATAACAGAAGTTTCATTGAGAATAAATGAAAGAATATAAAGGCAACTATCATGTGTACCATGCTCATATGAGTGTAGATCGACTGTTGTATTTAACTTGATTCAAACCATCATGTTGGAGCTCCATTCTCATCTGTAGACATTGATTAGACAAGGCCGACATCGTTTCACGACTCAGATGTATATCCAATTTTCTTTTGATCCTATATCTCCCCCTTTGCAGTTTTGTTTTGTGTCAATTTAACTGTGTAAATGATTTATGAGGTTATTCCTTTCCTCGCTATCTCGCTATCATGCCTGTGGGATACCTCATTGCTCTGGTGATTGGACTGATTAGTGTTGTATCAATTTGGTCCTGTTTGGTCAACTGGAA ATGCTTGGTAAGGGACTGAAAGCTCTAGGAGTTCCAAGGAGTGAGTATATTGTGTCAACAAAGTGTGGGAGATATGGTGACGGTTTTGATTTCAGTGCTGAGAGGGTGACAAGGAGCATTGATGAGAGTTTGGCTAGACTACAACTAGATTATGTCGATATACTGCATTGCCATGATATTGAATTTGGATCTCTTGATCAGGTTGTGAATGAGACGGTTCCTGCACTTCAAAAGCTAAAGGAAGCTGGGAAGACTCGTTTCATTGGTATTACAGGACTTCCATTGGAAATATTTACATATGTGCTCGATCGAGTACCACCTGGCACCATTGATGTGATTCTTTCATATTGTCACTACAGTATTAACGATTCAACACTGTTAGATTTGCTACCTTACTTGAAGAGTAAGGGAGTTGGAATAATCAGTGCGTCTCCTCTAGCAATGGGACTTCTAACCGATCATGGTCCCCCAGAATGGCACCCGGCTTCACCAGAATTGAAGTCTGCATGTCAAGCTGCAGCTGCTCATTGTAAAAAGAAGGGAAAAAACATTTCAAAGTTAGCCCTCCAATACAGTCTGGCAAACAAAGATATTTCAACAGTGCTGGTTGGCATGAACTCTGTCAGACAGGTGGAGGAAAACGTAGCTGCTGCTGAAGAACTTGCCACATTTGGGAGGGATGAGGAAACTCTGTCGGAGGTTGAAGCTATCCTTATCCCCGTCAAGAATCAGACATGGCCAAGTGGAATCCAAAAGAGCTGA MLGKGLKALGVPRSEYIVSTKCGRYGDGFDFSAERVTRSIDESLARLQLDYVDILHCHDIEFGSLDQVVNETVPALQKLKEAGKTRFIGITGLPLEIFTYVLDRVPPGTIDVILSYCHYSINDSTLLDLLPYLKSKGVGIISASPLAMGLLTDHGPPEWHPASPELKSACQAAAAHCKKKGKNISKLALQYSLANKDISTVLVGMNSVRQVEENVAAAEELATFGRDEETLSEVEAILIPVKNQTWPSGIQKS
BLAST of ClCG02G007540.1 vs. Swiss-Prot
Match: GALDH_ARATH (L-galactose dehydrogenase OS=Arabidopsis thaliana GN=LGALDH PE=1 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 5.2e-120 Identity = 211/253 (83.40%), Postives = 231/253 (91.30%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. Swiss-Prot
Match: ARA2_YEAST (D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARA2 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.0e-22 Identity = 69/254 (27.17%), Postives = 135/254 (53.15%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. Swiss-Prot
Match: GPR_ECO57 (L-glyceraldehyde 3-phosphate reductase OS=Escherichia coli O157:H7 GN=gpr PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16 Identity = 74/269 (27.51%), Postives = 135/269 (50.19%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. Swiss-Prot
Match: GPR_ECOLI (L-glyceraldehyde 3-phosphate reductase OS=Escherichia coli (strain K12) GN=gpr PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.7e-15 Identity = 72/269 (26.77%), Postives = 134/269 (49.81%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase YdjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14 Identity = 75/245 (30.61%), Postives = 107/245 (43.67%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TrEMBL
Match: E5GCR2_CUCME (L-galactose dehydrogenase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 4.4e-134 Identity = 240/253 (94.86%), Postives = 248/253 (98.02%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TrEMBL
Match: A0A0D2T010_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G042900 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 5.8e-126 Identity = 226/253 (89.33%), Postives = 241/253 (95.26%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TrEMBL
Match: A0A0B0NLB1_GOSAR (D-arabinose 1-dehydrogenase OS=Gossypium arboreum GN=F383_18998 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 5.8e-126 Identity = 227/253 (89.72%), Postives = 241/253 (95.26%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TrEMBL
Match: A0A0D2TWW3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G042900 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 5.8e-126 Identity = 226/253 (89.33%), Postives = 241/253 (95.26%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TrEMBL
Match: B9HN60_POPTR (L-galactose dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0009s08490g PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.7e-125 Identity = 223/253 (88.14%), Postives = 245/253 (96.84%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TAIR10
Match: AT4G33670.1 (AT4G33670.1 NAD(P)-linked oxidoreductase superfamily protein) HSP 1 Score: 431.8 bits (1109), Expect = 2.9e-121 Identity = 211/253 (83.40%), Postives = 231/253 (91.30%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. TAIR10
Match: AT1G04690.1 (AT1G04690.1 potassium channel beta subunit 1) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 46/163 (28.22%), Postives = 76/163 (46.63%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. NCBI nr
Match: gi|778724639|ref|XP_004136903.2| (PREDICTED: L-galactose dehydrogenase [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 2.0e-135 Identity = 243/253 (96.05%), Postives = 249/253 (98.42%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. NCBI nr
Match: gi|659110219|ref|XP_008455112.1| (PREDICTED: L-galactose dehydrogenase [Cucumis melo]) HSP 1 Score: 485.3 bits (1248), Expect = 6.3e-134 Identity = 240/253 (94.86%), Postives = 248/253 (98.02%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. NCBI nr
Match: gi|743795568|ref|XP_011002821.1| (PREDICTED: L-galactose dehydrogenase-like [Populus euphratica]) HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-126 Identity = 224/253 (88.54%), Postives = 245/253 (96.84%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. NCBI nr
Match: gi|728833166|gb|KHG12609.1| (D-arabinose 1-dehydrogenase [Gossypium arboreum]) HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-126 Identity = 227/253 (89.72%), Postives = 241/253 (95.26%), Query Frame = 1
BLAST of ClCG02G007540.1 vs. NCBI nr
Match: gi|763780710|gb|KJB47781.1| (hypothetical protein B456_008G042900 [Gossypium raimondii]) HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-126 Identity = 226/253 (89.33%), Postives = 241/253 (95.26%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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