ClCG02G006140.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG02G006140.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 6817791 .. 6820248 (+)
Sequence length1794
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCAACAAATTGCGCCACAAACGCCTATAACTCGTCTAGCATAGCCAAGGATGAGCGAGGAGGAAAGGCCAAGACGTCCCCAAGCATAGCACACGCAAGTGCCAAGGCACCACACATGGTTGCCAAGGGTGCCAGGCCACGCCACTGTCTCAAGAGTGTGGCCTAGCCAAAACCAGACACCCCATCAGATGCTGATGTGCGGAAGCACATGGTCGAGTGGCTGCGCAGCCAGCCACAGATGTGCAGCATACATGCGCTCCTGCCAAGATAGGCAGCGCCGTGTGCCCACCCGCACACGGATGCCAATCATGTGTGCCAAGCACACAACCAAGGCACGCGCTTGTTGATAGGCCTATGCGTGCACCCCGCACATGTACGAGGTGTGCGCCCATTGACTGCTCTGCAAGCGCACCCCTCGCACAACCTATGCACACGTCTGTGCCACAGTGGGCACAACAGTCTTCAGATGCCCCTTGAAGGTCCTAAAACATTCTAGAAGACTTGGCTCAACAAAGACCTATGCGCGTCTGGAAGGATACGCAGCCTGCTAGGCAGTGCCAGCGCCTATGTCCTGGTGCCTAACAAGCCCGGATACCACCACAAGACACTAGAAGGGGCCTGGCTACTCGCCCACGCCCCACACATCCCCGGAAGCCTCTAGACAAACCTCGAAGGCGTCAGACTACTCGAGAAGAGGCTCGATGGTGTTGGTGCGTCTCAGAAGTGTCCCGATAGGTTTTGAAGGCTCACGACGTGCTAGAGAGTGCTAGAAGTGTTTGAACGGTTCAAGAAGCTTTAATGGTAGTCGGACACCTACCCAATTGTACTAGAAGAACCTAGTTGAGTCTAGAAGTCTCTAGGTTAGGTCTTATTTATATAGTTCTAGGCTTGTACATATGTAACCGACACTTGTACATAAAGAATAGCCTAGAAGGGTCCTTGACCGACATTGTAAGTTGGTCATGCTAGGGAATGTCAGCTAGGCACCCCTATAAATACCCGATGGGGCATCATTTGTACACACATCCGAGAATCAAGCAATCCAAGCGACATTCTTCAAGCTTGAGCGATTGTCTCCGGTTGGTGAAGCTCTCTAAGCTCTCATTCACTCAAACTCTTTTAAGTCCTCCTTGCCTAAACACTTCCTCACCATCTCACCTGATTGTGCCTAGGGGAGGAAGATCCTAGAGCCTCAAAAGGCTTACTTGGTGTGTCTTTTGACAGTAAGATCACCCAAGTGTCGCGCGGTTGGTTAGGTCGAAACACTAACCACGTGACAGGTGGTATCAGAGCCTTACTCCTCCATCCTAGATACCCACACACACTTGTATTGTCGATAGTGAGATCGGTGGCCACTGAGGAAGGACGAAGCTCATCGGTGGAGCGTGTGCAAGTTGAAGGACCGGTGACCCAAAGGAAACGGCAAGATGATGCCCGTCTTCCAACTTGGAAAAGGTGCAACTTGTTGTGGGTTGGTTGAGTGAATGATTTGAGGAGCTTGTCCAAGAAAGCACCGAGATCACGGTAGTTACCAAGGAGATGATCAAGGAGCTGGGATGGACAATAAGTAAAGAGGTAAGTACCCTCTTCGATGAAGTAGCCAAACTAAGGAAGTTCGTGGAGGGGGAGCTTCACGAGCTTCGTGGGAAAGTCCACAACACACGTAAGGAGTGTCAGGCAAACCATAGTGCTAATGGAGGCACATCCACCAGCACAACATCATCTATTGCCCATGCCACCTGTGGGGTAAAGGTGCCAAAGCCCTATACTTATGAAGGTACAAGAAGTGTCACGGTTGTGGAGAACTTCTTGTTCGGCCTAGAGCAATACTTTGAGGCCCTAGGCACGTCGTCGATGATGGCGCTAAGATTGCAAATGCTCCTAACTTCCTACGTGAGGCAGCCCAACTATGGTGGCGTAGAAAGCACGCTGAGCGTGAGCTGGACAGATGCAACATTCGAACGTGGGAATAAGTCAAGTCAGAACTTCTAAAGCATTTTGTTCCGCATAATGCCCACATGGAGGCATGAGGCAAATTGAGGCGATTAAGGCAAAGCAGTAGCATCCCCGAGTACATAAAAAAATTCACAATCCTCATGCTGGAAATTGAGGGTCTATCCGACAAAGATGCATTCTTTTATTTCCGCGATGGTCTTAAAGATTGGGCGAGGATTGAGCTCGATAGGCGGAATGTGCAGACGCTTGATGATGCCATAGCCGCTGTTGAGATGCTTACTGACTTCTCGGCCAAGGGAAAGACGACCAACAAATATGAAGGAGAAGTGTCGAAGTTCGAGGAATCTGATGCGCATATAAGATTGAAGGGAGCCATAGGAATGGAAGAAAGAATGGGAAGGCTGCCGACAAGAACAGAGGTAAGCCCTTTAAACATCCTTTCTTCCTTTGCGATGGCCCATATTGGACGAGGGAATGTCCAAAGAGGAAGTCGCTTAA

mRNA sequence

ATGGCCCAACAAATTGCGCCACAAACGCCTATAACTCGAGGAAAGGCCAAGACGTCCCCAAGCATAGCACACGCAAGTGCCAAGGCACCACACATGGTTGCCAAGGGTGCCAGGCCACGCCACTGTCTCAAGACACATGGTCGAGTGGCTGCGCAGCCAGCCACAGATGTGCAGCATACATGCGCTCCTGCCAAGATAGGCAGCGCCGTGTGCCCACCCGCACACGGATGCCAATCATGTGTGCCAAGCACACAACCAAGGCACGCGCTTGTTGATAGGCCTATGCGTGCACCCCGCACATGTACGAGGTGTGCGCCCATTGACTGCTCTGCAAGCGCACCCCTCGCACAACCTATGCACACGTCTGTGCCACAGTGGGCACAACAACCTATGCGCGTCTGGAAGGATACGCAGCCTGCTAGGCAGTGCCAGCGCCTATGTCCTGACACTAGAAGGGGCCTGGCTACTCGCCCACGCCCCACACATCCCCGGAAGCCTCTAGACAAACCTCGAAGGCGTCAGACTACTCGAGAAGAGGCTCGATGGTGTTGGTGCGTCTCAGAAGGAATGTCAGCTAGGCACCCCTATAAATACCCGATGGGGCATCATTTGTACACACATCCGAGAATCAAGCAATCCAAGCGACATTCTTCAAGCTTGAGCGATTGTCTCCGGTTGGAAGATCCTAGAGCCTCAAAAGGCTTACTTGGTGTGTCTTTTGACAGTAAGATCACCCAAGTGTCGCGCGGTTGGTTAGGTCGAAACACTAACCACGTGACAGGTGGTATCAGAGCCTTACTCCTCCATCCTAGATACCCACACACACTTGTATTGTCGATAGTGAGATCGGTGGCCACTGAGGAAGGACGAAGCTCATCGGTGGAGCGTGTGCAAGTTGAAGGACCGGTGACCCAAAGGAAACGGCAAGATGATGCCCGTCTTCCAACTTGGAAAAGCACCGAGATCACGGTAGTTACCAAGGAGATGATCAAGGAGCTGGGATGGACAATAAGTAAAGAGGTAAGTACCCTCTTCGATGAAGTAGCCAAACTAAGGAAGTTCGTGGAGGGGGAGCTTCACGAGCTTCGTGGGAAAGTCCACAACACACGTAAGGAGTGTCAGGCAAACCATAGTGCTAATGGAGGCACATCCACCAGCACAACATCATCTATTGCCCATGCCACCTGTGGGGTAAAGGTGCCAAAGCCCTATACTTATGAAGGTACAAGAAGTGTCACGGTTGTGGAGAACTTCTTGTTCGGCCTAGAGCAATACTTTGAGGCCCTAGGCACGTCGTCGATGATGGCGCTAAGATTGCAAATGCTCCTAACTTCCTACGTGAGGCAGCCCAACTATGGTGGCGTAGAAAGCACGCTGAGCGTGAGCTGGACAGATGCAACATTCGAACGTGGGAATAAGTCAAGCAAATTGAGGCGATTAAGGCAAAGCAGTAGCATCCCCGAGTACATAAAAAAATTCACAATCCTCATGCTGGAAATTGAGGGTCTATCCGACAAAGATGCATTCTTTTATTTCCGCGATGGTCTTAAAGATTGGGCGAGGATTGAGCTCGATAGGCGGAATGTGCAGACGCTTGATGATGCCATAGCCGCTGTTGAGATGCTTACTGACTTCTCGGCCAAGGGAAAGACGACCAACAAATATGAAGGAGAAGTGTCGAAGTTCGAGGAATCTGATGCGCATATAAGATTGAAGGGAGCCATAGGAATGGAAGAAAGAATGGGAAGGCTGCCGACAAGAACAGAGGGAATGTCCAAAGAGGAAGTCGCTTAA

Coding sequence (CDS)

ATGGCCCAACAAATTGCGCCACAAACGCCTATAACTCGAGGAAAGGCCAAGACGTCCCCAAGCATAGCACACGCAAGTGCCAAGGCACCACACATGGTTGCCAAGGGTGCCAGGCCACGCCACTGTCTCAAGACACATGGTCGAGTGGCTGCGCAGCCAGCCACAGATGTGCAGCATACATGCGCTCCTGCCAAGATAGGCAGCGCCGTGTGCCCACCCGCACACGGATGCCAATCATGTGTGCCAAGCACACAACCAAGGCACGCGCTTGTTGATAGGCCTATGCGTGCACCCCGCACATGTACGAGGTGTGCGCCCATTGACTGCTCTGCAAGCGCACCCCTCGCACAACCTATGCACACGTCTGTGCCACAGTGGGCACAACAACCTATGCGCGTCTGGAAGGATACGCAGCCTGCTAGGCAGTGCCAGCGCCTATGTCCTGACACTAGAAGGGGCCTGGCTACTCGCCCACGCCCCACACATCCCCGGAAGCCTCTAGACAAACCTCGAAGGCGTCAGACTACTCGAGAAGAGGCTCGATGGTGTTGGTGCGTCTCAGAAGGAATGTCAGCTAGGCACCCCTATAAATACCCGATGGGGCATCATTTGTACACACATCCGAGAATCAAGCAATCCAAGCGACATTCTTCAAGCTTGAGCGATTGTCTCCGGTTGGAAGATCCTAGAGCCTCAAAAGGCTTACTTGGTGTGTCTTTTGACAGTAAGATCACCCAAGTGTCGCGCGGTTGGTTAGGTCGAAACACTAACCACGTGACAGGTGGTATCAGAGCCTTACTCCTCCATCCTAGATACCCACACACACTTGTATTGTCGATAGTGAGATCGGTGGCCACTGAGGAAGGACGAAGCTCATCGGTGGAGCGTGTGCAAGTTGAAGGACCGGTGACCCAAAGGAAACGGCAAGATGATGCCCGTCTTCCAACTTGGAAAAGCACCGAGATCACGGTAGTTACCAAGGAGATGATCAAGGAGCTGGGATGGACAATAAGTAAAGAGGTAAGTACCCTCTTCGATGAAGTAGCCAAACTAAGGAAGTTCGTGGAGGGGGAGCTTCACGAGCTTCGTGGGAAAGTCCACAACACACGTAAGGAGTGTCAGGCAAACCATAGTGCTAATGGAGGCACATCCACCAGCACAACATCATCTATTGCCCATGCCACCTGTGGGGTAAAGGTGCCAAAGCCCTATACTTATGAAGGTACAAGAAGTGTCACGGTTGTGGAGAACTTCTTGTTCGGCCTAGAGCAATACTTTGAGGCCCTAGGCACGTCGTCGATGATGGCGCTAAGATTGCAAATGCTCCTAACTTCCTACGTGAGGCAGCCCAACTATGGTGGCGTAGAAAGCACGCTGAGCGTGAGCTGGACAGATGCAACATTCGAACGTGGGAATAAGTCAAGCAAATTGAGGCGATTAAGGCAAAGCAGTAGCATCCCCGAGTACATAAAAAAATTCACAATCCTCATGCTGGAAATTGAGGGTCTATCCGACAAAGATGCATTCTTTTATTTCCGCGATGGTCTTAAAGATTGGGCGAGGATTGAGCTCGATAGGCGGAATGTGCAGACGCTTGATGATGCCATAGCCGCTGTTGAGATGCTTACTGACTTCTCGGCCAAGGGAAAGACGACCAACAAATATGAAGGAGAAGTGTCGAAGTTCGAGGAATCTGATGCGCATATAAGATTGAAGGGAGCCATAGGAATGGAAGAAAGAATGGGAAGGCTGCCGACAAGAACAGAGGGAATGTCCAAAGAGGAAGTCGCTTAA

Protein sequence

MAQQIAPQTPITRGKAKTSPSIAHASAKAPHMVAKGARPRHCLKTHGRVAAQPATDVQHTCAPAKIGSAVCPPAHGCQSCVPSTQPRHALVDRPMRAPRTCTRCAPIDCSASAPLAQPMHTSVPQWAQQPMRVWKDTQPARQCQRLCPDTRRGLATRPRPTHPRKPLDKPRRRQTTREEARWCWCVSEGMSARHPYKYPMGHHLYTHPRIKQSKRHSSSLSDCLRLEDPRASKGLLGVSFDSKITQVSRGWLGRNTNHVTGGIRALLLHPRYPHTLVLSIVRSVATEEGRSSSVERVQVEGPVTQRKRQDDARLPTWKSTEITVVTKEMIKELGWTISKEVSTLFDEVAKLRKFVEGELHELRGKVHNTRKECQANHSANGGTSTSTTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALGTSSMMALRLQMLLTSYVRQPNYGGVESTLSVSWTDATFERGNKSSKLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFSAKGKTTNKYEGEVSKFEESDAHIRLKGAIGMEERMGRLPTRTEGMSKEEVA
Homology
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BLAST of ClCG02G006140.1 vs. TrEMBL
Match: A0A0D2V7A9_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_012G1653001 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 86/287 (29.97%), Postives = 135/287 (47.04%), Query Frame = 1 

Query: 327 KEMIKELGWTISKEVSTLFDEVAKLRKFVEGELHELRGKVHNTRKECQANHSANGGTSTS 386
           +E +KE      K+++   D +  +   ++GE+ EL+G++   +         NGG + +
Sbjct: 2   QEQLKEYVTDNMKQLTGRDDAIEAMVVALKGEIAELKGELTIYKVAL-----GNGGLAAA 61

Query: 387 TTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALG--------TSSMMALR 446
                      + VPKP  ++GTRS   V+NFL+G+EQYF A G        T++ M L 
Sbjct: 62  APKP------NIDVPKPKEFQGTRSARDVDNFLWGIEQYFCAKGITEDVTKVTTAAMYLS 121

Query: 447 LQMLLTSYVRQPNY--GGVESTLSVSWTDATFE----------RGNKSSKLRRLRQSSSI 506
              LL    R  +   GG E     +W +   E               ++L RL Q  ++
Sbjct: 122 DVALLWWRRRSTDVRRGGSEIE---TWEEFRCEFKAQFYPEYAEDEARARLHRLAQQGTV 181

Query: 507 PEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFS 566
            EY+++F+ LML+I  + +K+AFF F DGLK WA+ EL RR VQ L  A++  E L +F 
Sbjct: 182 REYVQEFSELMLQISDMEEKEAFFSFMDGLKPWAKQELQRRGVQELTKAMSVAESLAEFG 241

Query: 567 AKGKTTNKYEGEVSKFEESDAHIRLKGAIGMEERMGRLPTRTEGMSK 594
            +   +N             +  RLKG  G ++     PTR +   K
Sbjct: 242 GRKDNSN------------SSKPRLKGNSGGDKER---PTRNDDGKK 259

[Close]
BLAST of ClCG02G006140.1 vs. TrEMBL
Match: A0A0D3AK41_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 8.5e-19
Identity = 81/259 (31.27%), Postives = 118/259 (45.56%), Query Frame = 1 

Query: 337 ISKEVSTLFDEVAKLRKFVEGELHELRGKVHNTR-------------KECQANHSANGGT 396
           + +  + L     +L + V G +  L   +   +             K   AN  A GGT
Sbjct: 94  VKQNTADLDSRFIRLEELVTGSMQALHDDIEGMKTRFTAMEEDITLVKRASANAEAVGGT 153

Query: 397 STSTTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALGTSSMMALRLQMLL 456
           S             V+ PKP  + G R    VENFL+ +E YF+ L   +  A       
Sbjct: 154 SIGK----------VEFPKPNRFNGVRDAKEVENFLWQMEIYFDNLNVVAENAK--VKAA 213

Query: 457 TSYV--------RQPNYGGVESTLSV-SWTDATFERGNK----------SSKLRRLRQSS 516
           TSY+        R+ +    + T  + +W D   E   +            KLR LRQ  
Sbjct: 214 TSYLSDTAMLWWRRKHSEIEQGTCRIDTWYDFKKELKRQLYPENVVYEARKKLRELRQHG 273

Query: 517 SIPEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTD 562
           SI +Y+K+FT LML+I  ++ +D  FYF DGL+ WA+ EL R  V+T+D+AIA  E LTD
Sbjct: 274 SIRDYVKEFTTLMLQIPNMTAEDLVFYFTDGLQSWAKQELQRWGVKTVDEAIAVAESLTD 333

[Close]
BLAST of ClCG02G006140.1 vs. TrEMBL
Match: A0A0D3AP01_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.5e-18
Identity = 88/306 (28.76%), Postives = 130/306 (42.48%), Query Frame = 1 

Query: 337 ISKEVSTLFDEVAKLRKFVEGELHELRGKVHNTR-------------KECQANHSANGGT 396
           + +  + L     +L + V G +  LR  +   +             K    N  A GGT
Sbjct: 73  VKQNAADLDSRFIRLVELVTGSMQALRDDIEGMKARFTAMEEDITLVKRASVNAEAVGGT 132

Query: 397 STSTTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALGT---------SSM 456
           S             V+ PKP  + G R    VENFL+ +E YF+ L             +
Sbjct: 133 SIGK----------VEFPKPNRFNGVRDAKEVENFLWQMEIYFDNLNLVAENAKPCYGGL 192

Query: 457 MALRLQM-LLTSYV--------RQPNYGGVESTLSV-SWTDATFERGNK----------S 516
           +A   ++   TSY+        R+ +    + T  + +W D   E   +           
Sbjct: 193 VAENAKVKAATSYLSDTAMLWWRRKHSEIEQGTCRIDTWDDFKKELKRQFYPENVVYEAR 252

Query: 517 SKLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDD 576
            KLR LRQS SI EY+K+FT LML+I  ++ +D  F F DGL+ W + EL RR V+T+D+
Sbjct: 253 KKLRELRQSGSIQEYVKEFTTLMLQIPNMTAEDLVFNFTDGLQSWTKQELQRRGVKTVDE 312

Query: 577 AIAAVEMLTDFS----AKGKTTNKYEGEVSKFEESDAHIRLKGAIGMEE--RMGRLPTRT 595
           AIA  E LTDF     ++G     +E   + F         KG   M++  +MG L    
Sbjct: 313 AIAVAESLTDFHTSGLSEGARREDFEARENSFVPKGGCFVCKGPHAMKDCLKMGSLSAIM 368

[Close]
BLAST of ClCG02G006140.1 vs. TrEMBL
Match: V4NVS2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023044mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18
Identity = 77/226 (34.07%), Postives = 109/226 (48.23%), Query Frame = 1 

Query: 349 AKLRKFVEGELHELR---GKVHNTRKECQAN------HSANGGTSTSTTSSIAHATCGVK 408
           AKL + V G +  L+   G++ N   E Q +       +ANGG   + T +       V+
Sbjct: 85  AKLEETVMGAVQVLKDNIGEILNRLGEVQEDLVLCKRAAANGGAGITETRAAR-----VE 144

Query: 409 VPKPYTYEGTRSVTVVENFLFGLEQYFEALGTSSMMALRLQMLLTSYVRQPNYGGVE-ST 468
           +P+P  + G R    VENFL+ +EQYFE LG +                   Y  VE +T
Sbjct: 145 LPRPARFNGVRDAQEVENFLWEMEQYFENLGLTD--------------EGDGYAVVEKAT 204

Query: 469 LSVSWTDAT------FERGNK------------SSKLRRLRQSSSIPEYIKKFTILMLEI 528
              S  D        F+R  K              KLR  RQ  +I +Y+ +FT L+L+I
Sbjct: 205 CGDSLRDRPDRHMEEFKRDMKRQFYPENVVYQAQKKLREFRQKDTIRDYVTEFTALLLQI 264

Query: 529 EGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFS 547
              +  D+ FYF DGL+ WA+ EL RR V ++D+AIAA E L+DFS
Sbjct: 265 PSTNKDDSVFYFIDGLQPWAKQELQRRGVHSVDEAIAAAESLSDFS 291

[Close]
BLAST of ClCG02G006140.1 vs. TrEMBL
Match: V4KQR9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023881mg PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.1e-17
Identity = 71/211 (33.65%), Postives = 108/211 (51.18%), Query Frame = 1 

Query: 357 GELHELRGKVHNTRKECQANHSANGGTSTSTTSSIAHATCGVKVPKPYTYEGTRSVTVVE 416
           GE+    G+VH     C+ + +ANGG   + T +       V+  +P  ++G R    VE
Sbjct: 42  GEILNSLGEVHEDLVLCK-HAAANGGAGITETIAAR-----VEFQRPAWFKGVRDAQEVE 101

Query: 417 NFLFGLEQYFEALG---------TSSMMALRLQMLLTSYVRQPNYGGVESTLSVSWTDAT 476
           NFL+ +EQ FE LG         T++     + ML   + R+ +   V   + +   D  
Sbjct: 102 NFLWEMEQSFENLGLTYEGSKIKTATSYLAEMAML---WWRRRHAEIVRGIVRIDTWDK- 161

Query: 477 FERGNKSS------------KLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAFFYFRDG 536
           F+R  K              KLR L Q  +I +Y+ +FT L+L+I   S+ D+ FYF DG
Sbjct: 162 FKRDLKRQFYPENVVYQVRKKLRELHQKGTIRDYVMEFTALLLQIPSTSEDDSVFYFIDG 221

Query: 537 LKDWARIELDRRNVQTLDDAIAAVEMLTDFS 547
           L+ WA+ EL RR V ++++AIAA E L+DFS
Sbjct: 222 LQPWAKQELQRRGVYSVNEAIAAAESLSDFS 242

[Close]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match: gi|659068885|ref|XP_008446938.1| (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 116/259 (44.79%), Postives = 146/259 (56.37%), Query Frame = 1 

Query: 318 KSTEITVVTKEMIKELGWTISKEVSTLFDEVAKLRKFVEGELHELRGKV--HNTRK---- 377
           ++ EIT V KEMI+++G T  KE+  L   V  L+ FVEGELH L  K     TR     
Sbjct: 75  ENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHNLHTKSISFETRLDALC 134

Query: 378 -ECQANHSANGGTSTSTTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALG 437
            EC++ H  +   S ST  + +  T  +KVPKP  Y G R+ TVV+NFLF LE+YF ALG
Sbjct: 135 VECRSKHLGSNAPSMSTHPTTS-GTSNIKVPKPDVYNGVRNSTVVDNFLFSLERYFVALG 194

Query: 438 TSSMMALRLQMLLTSYVR-------QPNYGGVESTLSVSWTDATFERGN----------K 497
                A R+  + T ++R       +  Y         SW     E              
Sbjct: 195 VRDDEA-RINHVPT-FLRDAAQLWWRRKYADQSGNAIHSWEQFKTELRKHFVPHNAEIES 254

Query: 498 SSKLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLD 551
             KLRRLR + SI +Y+K+FT LMLEI  L +K+A F F+DGLKDWA+IELDRRNVQTLD
Sbjct: 255 RGKLRRLRHTRSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLD 314

[Close]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match: gi|985465103|ref|XP_015389228.1| (PREDICTED: uncharacterized protein LOC107178484 [Citrus sinensis])

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39
Identity = 125/349 (35.82%), Postives = 172/349 (49.28%), Query Frame = 1 

Query: 231 ASKGLLGVSFDSKITQVSRGWLGRNTNHVTGG-IRALLLHPRYPHTLVLSIVRSVATE-- 290
           A +G++GV       + SRG  G      T G  +A  +    P    L I  S A +  
Sbjct: 8   AQEGVVGVDVPP---EPSRGREGERAQGKTRGKSKAPSVDALEPRVTTLEITLSAAQDSL 67

Query: 291 EGRSSSVERVQVEGPVTQRKRQDDARLPTWKSTEITVVTKEMIKELGWTISKEVSTLFDE 350
           EG    V+ ++ E                    E TV TK +I+E   T+  E     DE
Sbjct: 68  EGLEERVDGLEGE------------------YVEFTVATKALIQEQANTLRGEFRAFHDE 127

Query: 351 VAKLRKFVEGELHELRGKVHNTRKECQANHSANGGTSTSTTSSIAHATCGVKVPKPYTYE 410
           + KLR F + EL  +R +V   R +   +      +  S  SS A     + VPKP TY+
Sbjct: 128 LLKLRSFAQDELRAVRVEVDEVRSDWVWHKRTLSASPASANSSDARR---IDVPKPDTYD 187

Query: 411 GTRSVTVVENFLFGLEQYFEALGTSSMMA--------LRLQMLLTSYVRQPNYGGVESTL 470
           GTR+ T+V+NFLFGL+QYF+A+G     +        LR    L    +    G    T+
Sbjct: 188 GTRNATIVDNFLFGLDQYFDAMGVRDEASKVGTAPTYLRGAAQLWWRRKHGEMGKGICTI 247

Query: 471 SVSWTDATFERGNK----------SSKLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAF 530
             +W D   E   +           ++LRRL+QS SI +YI +FT LMLEI  +SDKD+ 
Sbjct: 248 D-TWADFKQELRKQFAPSNAEKEARARLRRLKQSGSIRDYINEFTTLMLEISDMSDKDSL 307

Query: 531 FYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFSAKGKTTNKYEGE 559
           FYF+DGLKDWA+ ELDRR VQTLDDAIA  E LT++S + K     +G+
Sbjct: 308 FYFQDGLKDWAKTELDRRGVQTLDDAIAVAESLTEYSTQSKDKKANQGK 331

[Close]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match: gi|568882001|ref|XP_006493831.1| (PREDICTED: uncharacterized protein LOC102625991 [Citrus sinensis])

HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39
Identity = 127/348 (36.49%), Postives = 174/348 (50.00%), Query Frame = 1 

Query: 231 ASKGLLGVSFDSKITQVSRGWLGRNTNHVTGG-IRALLLHPRYPHTLVLSIVRSVATEEG 290
           A +G++GV       + SRG  G      T G  +AL +    P    L I  S A ++ 
Sbjct: 8   AQEGVVGVDVPP---EPSRGREGERAQGKTRGKSKALSVDALEPRVGTLEIALSAA-QDS 67

Query: 291 RSSSVERVQ-VEGPVTQRKRQDDARLPTWKSTEITVVTKEMIKELGWTISKEVSTLFDEV 350
                ERV  +EG                +  E TV TK +I E    +  E  +  DE+
Sbjct: 68  LMGLEERVDGLEG----------------EYAEFTVATKALIHEQANILRGEFRSFHDEL 127

Query: 351 AKLRKFVEGELHELRGKVHNTRKECQANHSANGGTSTSTTSSIAHATCGVKVPKPYTYEG 410
            KLR FV+ EL  +R +V   R +   +      +  S  SS A     + VPKP TY+G
Sbjct: 128 LKLRSFVQDELRTVRAEVDEVRSDWTWHKRTLSVSPASANSSDARR---IDVPKPDTYDG 187

Query: 411 TRSVTVVENFLFGLEQYFEALGTSSMMA--------LRLQMLLTSYVRQPNYGGVESTLS 470
           TR+ T+V+NFLFGL+QYF+A+G     +        LR    L    +    G    T+ 
Sbjct: 188 TRNATIVDNFLFGLDQYFDAMGVRDEASKVGTAPTYLRGAAQLWWRRKHGEMGKGICTID 247

Query: 471 VSWTDATFERGNKSS----------KLRRLRQSSSIPEYIKKFTILMLEIEGLSDKDAFF 530
            +W D   E   + +          +LRRL+QS SI +YI +FT LMLEI  +SDKD+ F
Sbjct: 248 -TWADFKQELRKQFAPSNAEKEARVRLRRLKQSGSIRDYINEFTTLMLEISDMSDKDSLF 307

Query: 531 YFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFSAKGKTTNKYEGE 559
           YF+DGLKDWA+ ELDRR VQTLDDAIA  E LT++S + K     +G+
Sbjct: 308 YFQDGLKDWAKTELDRRGVQTLDDAIAIAESLTEYSTQSKDKKANQGK 331

[Close]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match: gi|659111573|ref|XP_008455798.1| (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 107/239 (44.77%), Postives = 134/239 (56.07%), Query Frame = 1 

Query: 336 TISKEVSTLFDEVAKLRKFVEGELHELRGKV--HNTRK-----ECQANHSANGGTSTSTT 395
           T  +E+  L   V  L+ FVEGELH L  K     TR      EC++ H  +   STST 
Sbjct: 4   TFQEELKELASTVTTLKAFVEGELHNLHTKSISFETRLDALCVECRSKHLGSNAPSTSTH 63

Query: 396 SSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALGTSSMMALRLQMLLTSYVR 455
            + +  T  +KVPKP  Y G R+ T+V+NFLFGLE+YF ALG     A R+    T ++R
Sbjct: 64  PTTS-GTSNIKVPKPDVYNGVRNATIVDNFLFGLERYFVALGVRDDEA-RINHAPT-FLR 123

Query: 456 -------QPNYGGVESTLSVSWTDATFERGN----------KSSKLRRLRQSSSIPEYIK 515
                  +  Y         SW     E                KLRRLR + SI +Y+K
Sbjct: 124 DAAQLWWRRKYADQSGNTIHSWEQFKTELRKHFVPHNAEIESRGKLRRLRHTGSILDYVK 183

Query: 516 KFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLTDFSAKGK 551
           +FT LMLEI  L +K+A F F+DGLKDWA+IELDRRNVQTLDDAIAAVE L D+SA+ K
Sbjct: 184 EFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAVETLVDYSAQSK 239

[Close]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match: gi|985470854|ref|XP_015381093.1| (PREDICTED: uncharacterized protein LOC107174589 [Citrus sinensis])

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-35
Identity = 106/292 (36.30%), Postives = 153/292 (52.40%), Query Frame = 1 

Query: 321 EITVVTKEMIKELGWTISKEVSTLFDEVAKLRKFVEGELHELRGKVHNTRKECQANHSAN 380
           E TV TK ++++   ++  E     DE+  LR FV+ ELH +R +V   R +  A H   
Sbjct: 80  EFTVATKALMQDQADSLRGEFRAFHDELLSLRTFVQNELHAVRAEVDEVRLDW-AWHKRT 139

Query: 381 GGTSTSTTSSIAHATCGVKVPKPYTYEGTRSVTVVENFLFGLEQYFEALGT---SSMMAL 440
              S +   + +     + VPKP TY+G R+  VV+NFLFGLEQYF+A+G    +S +  
Sbjct: 140 LTPSPAAVPASSSDARRIDVPKPDTYDGARNAIVVDNFLFGLEQYFDAMGVRDDASKVGT 199

Query: 441 RLQMLLTSYVR--QPNYGGVESTLSVSWTDATFERGNKS------------SKLRRLRQS 500
               L  S     +  +G +   +    T A F++  +             ++LRRL+Q+
Sbjct: 200 APTFLRGSAQLWWRRKHGEMGKGICAISTWAEFQQELRKHFAPSNAEKEARARLRRLKQT 259

Query: 501 SSIPEYIKKFTILMLEIEGLSDKDAFFYFRDGLKDWARIELDRRNVQTLDDAIAAVEMLT 560
            S+ +YI  FT LMLEI  +SDKD+ FYF+DGLK+WA+ ELDRR VQTLDDAIA  + L+
Sbjct: 260 GSVRDYINDFTTLMLEISDMSDKDSLFYFQDGLKNWAKTELDRRAVQTLDDAIAIAKSLS 319

Query: 561 DFSAKGKTTNKYEGEVSKFEESDAHIRLKGAIGMEERMGRLPTRTEGMSKEE 596
           D+SA+ K      G+       D     KG    E    + P+   G  K E
Sbjct: 320 DYSAQPKDKRPSHGKGGGEGRKD-----KGRNRKEWGQKKPPSSKSGQGKTE 365

The following BLAST results are available for this feature:
BLAST of ClCG02G006140.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2V7A9_GOSRA1.7e-1929.97Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_012G1653001 PE... [more]
A0A0D3AK41_BRAOL8.5e-1931.27Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A0D3AP01_BRAOL2.5e-1828.76Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
V4NVS2_EUTSA4.2e-1834.07Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023044mg PE=4 SV=1[more]
V4KQR9_EUTSA6.1e-1733.65Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023881mg PE=4 SV=1[more]
BLAST of ClCG02G006140.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068885|ref|XP_008446938.1|1.1e-4044.79PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo][more]
gi|985465103|ref|XP_015389228.1|2.1e-3935.82PREDICTED: uncharacterized protein LOC107178484 [Citrus sinensis][more]
gi|568882001|ref|XP_006493831.1|4.8e-3936.49PREDICTED: uncharacterized protein LOC102625991 [Citrus sinensis][more]
gi|659111573|ref|XP_008455798.1|1.2e-3744.77PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo][more]
gi|985470854|ref|XP_015381093.1|1.9e-3536.30PREDICTED: uncharacterized protein LOC107174589 [Citrus sinensis][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG02G006140ClCG02G006140gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG02G006140.1ClCG02G006140.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG02G006140.1.cds1ClCG02G006140.1.cds1CDS
ClCG02G006140.1.cds2ClCG02G006140.1.cds2CDS
ClCG02G006140.1.cds3ClCG02G006140.1.cds3CDS
ClCG02G006140.1.cds4ClCG02G006140.1.cds4CDS
ClCG02G006140.1.cds5ClCG02G006140.1.cds5CDS
ClCG02G006140.1.cds6ClCG02G006140.1.cds6CDS
ClCG02G006140.1.cds7ClCG02G006140.1.cds7CDS
ClCG02G006140.1.cds8ClCG02G006140.1.cds8CDS
ClCG02G006140.1.cds9ClCG02G006140.1.cds9CDS
ClCG02G006140.1.cds10ClCG02G006140.1.cds10CDS