ClCG02G004040.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGAAACAAATGATGACAGTCCTCTCATCTGCTCCTTCTTCTTCCTCCGTTTCTTGGCTTTCATTCTTCTCTTCAAACTCTTTCGCTTACTTCAGAACCCAACCCTCTGCCCCTTCAACCTCCTCTTGCTTTCTCAATCGTCCACCCATTAGAATCTCAAATGTTTTCACCAACCAACAACCTACCTTCCCACTTCACAAATCTAAGTTTAGGGTTTCAGAAGGTGCTTCTGAGGATGAGTTTTGGGCTGCTGCTTGTCTCCGCATTCGCACCTTCAATCACTTCCCCCCCGATTCCTTTGGCATCGATGTGAGTTGTCTAAATTTTATGTTGTATGCTTTTCCGCAATCAATTTATTCAACTGTTTGGTGGAACGTGGATGTTTGATTCTTGAGACCCAATTCTCATTTCTCTGCTTTATTTTAGGTTTAATTATATATAAAAAAATAAAAGAAAAAAACCATCAACTAGGAGGTTGGTTTCAATTATGCCTTCGAATTCTGAAAAGTTTCATTTATTAAAACCCTTAAGTTTGAAAAGTTTTTTCTTTTCAAAACAACCCTTGAAAGCTTTTGTCCTTAAATTCATTGGTGGAAAAGGTAAGTTTGTGTATGTTCATATGTGGTTTAAGTGAACAAATCTAAACACATACGTGAGGTAGAGTTAGCGAAAAAGTCACGAACGAAATAACTGAAGATTTGGGACTTGGTTGTAAGGAGTAAGACGGAAAAAGGTATGGTTTACAGATGCTCATGTGTCTTTATTATTAATATTATTATTTCCATGTATGTATTTAGATAAATACTTTTTGTCTATGAATTTAACCACAAAAGCAAGTTAAAATGAAACTTTAAAAAGTTCAGGTATAATTGAAACCAACTCGATAGTTTAACCATATATATATATATATATATTTTAATTTAACCTTTACTAGCTCATTATCCATAACTACACGAACCTGGTTTCATATTTTCATTTTTAATGTTCTGGAAAGTGGGAACTAATACAAATTTCTTGAAGTCTAATTTAATTTTTAGTTACCATTGTTTTGTAAATTCTCTAAATCCAAATATCGTTCACTTTGAATGGATCTAAAGTTGTGCATGCTTCTATTAGTAGAGTGGATCCAATTTTGTTGGTATATATCTTCGAATGGAATTGAATGGAGAGTGTTGAGGATACCACATCGAAAGGATGAAAACATCTCACAATCTTTATAAGATACATCAGTTGCTCCTTTTGTTGCTAAATGGTTTAGAGATAGAACTTCATGTTTATTGAATATGATATTAGAGCCTCTGAAACCCAAATAGGTAACAAAAGAGGTACAACATTGAGGATTCTACATTGGAAAGAATGAAGAGACCTTACCATTTAGATAAGATATATGTGAAATCTTGTTGTAGAAAGATGAAGGGAATAGTAAATAAAGAAAGATAGAGATGGAAAAATGAACTGTTAGCCCGTCCTACTTAAAGCTTCCATTTCTTATCTTTCGTGACTAAAACTTCATTTTGTATGTGTAATTTTTCTTGCTCTCTATATGATATACTGATGTCGTTCCTTTTTTGTCAAGTTCTATTAGGATCATAAGAAGTACTTGGCTGAGCATGAATTTGAAGCAATGAAAGAACGTATTGCTGGAAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGGTCTGTTTATTTCCTTATTGTTTCGATATGAATGTGGTATGTCATGGTCTCCATTCCTAGATTAACTTGGAACCCATGTTTCAATCCGTTCAAATGGTTATGATGTTTGAAGAATAGGAAATTAGTTAAAATACAAACCTATAAATTCTCAAGTTTTCATATCTGAAAAATGATGAAAGAAAAATTGAAGTGGTTGTTTAAAGAAATTAGGACTTTTTGTCCTTTGTTTAAAATGAAAATGTGAATGTTGATATGCAGGAAAAGCAAGGTTCGTGCGTTAATGAGGCTGCCTCACCTCACATGAAGTGAGTTGCCTCTGTTGCGCTAGACGTGTTAAAACAGTGTATTTGTTTGTCGTTTGCAACAATGTTATGCATACCAAAGTTATGGAAAAAAGATCTTATGAAGATGGGGAAAGAACTAAACATATTCTGGCTATTTTTTCCACATTATGTAAATGTAGGTTATTATAGTGCAAAAAAGCTAGAATGTGATTGTAATGTGATAGGCCCCCGATTTACAAAGGTGTACATGCAAGGGAGGAAAGTGAGCGAGTGAGTGAGGGGGAATTACGTGTACAAGTAGGGGCCGCACTTTGTGTTTGGGCTGTTTGGTTGGGTATATAGCTGGTTGGGTATCTTCTTGCTTCATTTTGGTATGCTCTGTGAGAATTGAGAGAGGTAGGAAGCTGTTTAATCTTTCTTGTTACCTTGCTATCCGACATAAATAAAATTGTTGTTGGGCAAGGCCTATGATAATCCTCTGGCCATGTTTTTTCCTTTCTTGCTGCTGTTGGTTTTGCGTTGAAGCAGATTATGCAACCTTATATATGTCTACTCTTTGAGCTTAGACTGTATTAATTCTACAAACTACAAAGTTGTCCTTTGTTCTGATCCACAATTTGACAATCATTTTCAATTTTAGTTTTCTGATAATGGAGAAGACAGAGTTGTAGTTGGGTCACTTGACCTTAATCAATGTGTAAGGCTTCCAGATGAAATAACAGGACTGAAACCTGAGGTAAATGATTAATTTCTTTATTTTTATAATATTTTTATTTCTGTTTACAGTCTCCTGATTAAAAATCATGACCATGTTTCATTATTATTTTTGAACATCAGAGTTACTCTTTGGCTCAATCTCTGTTCAACCTGGCAAATAATTGACTATCGTTTGGAAAATATTCTTCTGATAATGAACAAGTCTCATTATTATTTATTAGCTCTTGATTTTTGAGTTCTGAATTTGATAGCCAACATGTGTTTTCCAAGATTCAGATAATTGAAATAAAAGTATAGTATTGCTGTTTTTATTGAGAAAAAAAATGAAGGAATACAAGGACATACAAAAAAACCAAGACCACCAAAATCTCCACTAAAGCTACCAATTTAGCTGGAAGAAAAATTACAAAAAGTTTTCAAAATTGAAGTCCAAAGGGATACATGAAACTTCACCACGAACCAAACATCATTAGGGTCTCACTCTACCCTTCCATTCCACCCAAGGCTCCATAACAGATCACACACCCTAGCAAACTACGAAAAATGACCCTTTTTTTTTTTTTAAGGAGGATAGAGGAGGAACTATCTGATCGAATTACTTGTCATCCATATAATAATTGTTTAAGTTCTTTTATACAATAGAAACTAGAAAGGTCGTTCTTGAAATTAGAATGAAGGAAGCCTCTCCATGAAGAAATATCTGAATAAGATGAAGAGTGATGCTGATTTGCTAACCTCATCTTTAAATACAATTGCAGAGATCTGATTCTTGTATTAACCCATATTGAAGAAAGTGTCCATAACAATGTCAATATCAATAAAATGTCAACATGGATGGAAATTTTTGAAAAATAATTGAAAAAAAAACATTTAATAGTGAATTAAAATATTTATTATTTATATTATATTTACATTTGTGACATTTTGTTGCTTATTTTTTATGTATAACAATGGAAATGTCCACCCGACTCACCCCTCATATCAAATATTGAACCCATAAACATGTGGAAATATCAGTAAAATGTTGACTTTTATAAGAGATTTAGATAATAAGTCAAATTTTCATGATATCTAAAATGTTTTTTTTTTCCATCAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCCAAGGAACTGCAAAGGAATGGGTTGGGTTATGCACTTGTTGCCAAGGCAAAAACAATTGCACAAGATTGGGGTAATTATAACCATCTTTTCACACTTATGTTTTACTCAGTTTCATTCATGTCTAAAATGAGAGAAACTGTCATGACCCTTTTTTGCTTTATGAATGATTCCCATCTCCTTGTTTATGGCTTCTACTTCACAATGTGATCTCACCATCGCAAACTCATGGTCCGTTTTGGCTTAGGCCCTGAATTTTTAAGTTTGTGTCTATTTGTTTTTTAAATTTTGTAAGTGTCTAATAAATACCTAAGAATTCAAGTGTTTCTTTAACAAGAATACGATCACATTATGGTTAAATTCAACTGTTTAATAAGTTTCTACACTTCAAATTTTGCATTTAATAGAGGTTCCTAAATTTTCAATTTTGTATCTAATAAATCTGTTTTGTTTTATATATTTTTTTTTTAAAAAAATATTTCATTATTGATCTATTAAATGAAAGATTGAATTTTACGTTTAGTATAATCTTAAAATTTCTATTTTATGTTTGGTTGATACATATTTTTTTAAGAAAATTGTTGAATGAGTCAAAAACAATAAATAAATATCTATGTATCTTATTTCTGTTTGTTCTCCCAATTTTTCAAGTATGGTTTTATCATTATTAAGAAAACGACTGAATTTCTAGTAAAATCCTAAAAACAGAAACAATTTTATGAAAACTACATTTTTAAGTTTTTAAAACTTGACTTGTTTTTGAAAACATTAGTCGAAAATAGCTAATAGAACATGTGCTCTTAATTTTTAGAAACCAAATAGTTAATAGAAGCCTTAAAAATCTGTTGGACACAAAATTGGAAGGGGGAGGATCTATTAAAGTTAAGGAGCTTAATGAAGATTAGACTCGTTTTAAAGTCTTGGTACTTAATGATCAATATTTTGACAAGTTTATTAATCAAATAGACACGAACAAAGGTGAGAGTTAGAAAGATTGAAGTTTATTTATGATATAAATAAATGGATGTGATGTGAGGTGAAATGTTTATGTGTTTATGTTATAGGGATAAGCGATCTATACGTTCATGTAGCATTCGACAACGAAGGTGGAAAGAAGCTTTATATGAAAAGTGGTTTTGTTTATGAAAGCGACGAACCAAGTTGGCAAGCCAGGTTTCTTGATCGTCCTCGCAGGATTCTCTTCTGGACTCCTCTCTCTCAATCTCTTCTCTGATTTTTGTTTTTTTCCTAATTTACTAAAATTTTATTCATTGTAGAATTGTATGAATACGGAG GGAAGAAACAAATGATGACAGTCCTCTCATCTGCTCCTTCTTCTTCCTCCGTTTCTTGGCTTTCATTCTTCTCTTCAAACTCTTTCGCTTACTTCAGAACCCAACCCTCTGCCCCTTCAACCTCCTCTTGCTTTCTCAATCGTCCACCCATTAGAATCTCAAATGTTTTCACCAACCAACAACCTACCTTCCCACTTCACAAATCTAAGTTTAGGGTTTCAGAAGGTGCTTCTGAGGATGAGTTTTGGGCTGCTGCTTGTCTCCGCATTCGCACCTTCAATCACTTCCCCCCCGATTCCTTTGGCATCGATGATCATAAGAAGTACTTGGCTGAGCATGAATTTGAAGCAATGAAAGAACGTATTGCTGGAAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGGAAAAGCAAGGTTCGTGCGTTAATGAGGCTGCCTCACCTCACATGAAGCCCCCGATTTACAAAGGTGTACATGCAAGGGAGGAAAGTGAGCGATTTTCTGATAATGGAGAAGACAGAGTTGTAGTTGGGTCACTTGACCTTAATCAATGTGTAAGGCTTCCAGATGAAATAACAGGACTGAAACCTGAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCCAAGGAACTGCAAAGGAATGGGTTGGGTTATGCACTTGTTGCCAAGGCAAAAACAATTGCACAAGATTGGGGGATAAGCGATCTATACGTTCATGTAGCATTCGACAACGAAGGTGGAAAGAAGCTTTATATGAAAAGTGGTTTTGTTTATGAAAGCGACGAACCAAGTTGGCAAGCCAGGTTTCTTGATCGTCCTCGCAGGATTCTCTTCTGGACTCCTCTCTCTCAATCTCTTCTCTGATTTTTGTTTTTTTCCTAATTTACTAAAATTTTATTCATTGTAGAATTGTATGAATACGGAG ATGATGACAGTCCTCTCATCTGCTCCTTCTTCTTCCTCCGTTTCTTGGCTTTCATTCTTCTCTTCAAACTCTTTCGCTTACTTCAGAACCCAACCCTCTGCCCCTTCAACCTCCTCTTGCTTTCTCAATCGTCCACCCATTAGAATCTCAAATGTTTTCACCAACCAACAACCTACCTTCCCACTTCACAAATCTAAGTTTAGGGTTTCAGAAGGTGCTTCTGAGGATGAGTTTTGGGCTGCTGCTTGTCTCCGCATTCGCACCTTCAATCACTTCCCCCCCGATTCCTTTGGCATCGATGATCATAAGAAGTACTTGGCTGAGCATGAATTTGAAGCAATGAAAGAACGTATTGCTGGAAAAAGGGTTGGGTTTAAAAGAGTATCTTGCATAAATGCTACTCTTCCATTATCAGAAATATCAACCTTAGCTGAAGATTTATGTTCAACATGTAAGGAAAAGCAAGGTTCGTGCGTTAATGAGGCTGCCTCACCTCACATGAAGCCCCCGATTTACAAAGGTGTACATGCAAGGGAGGAAAGTGAGCGATTTTCTGATAATGGAGAAGACAGAGTTGTAGTTGGGTCACTTGACCTTAATCAATGTGTAAGGCTTCCAGATGAAATAACAGGACTGAAACCTGAGGGAATTGGGGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCCAAGGAACTGCAAAGGAATGGGTTGGGTTATGCACTTGTTGCCAAGGCAAAAACAATTGCACAAGATTGGGGGATAAGCGATCTATACGTTCATGTAGCATTCGACAACGAAGGTGGAAAGAAGCTTTATATGAAAAGTGGTTTTGTTTATGAAAGCGACGAACCAAGTTGGCAAGCCAGGTTTCTTGATCGTCCTCGCAGGATTCTCTTCTGGACTCCTCTCTCTCAATCTCTTCTCTGA MMTVLSSAPSSSSVSWLSFFSSNSFAYFRTQPSAPSTSSCFLNRPPIRISNVFTNQQPTFPLHKSKFRVSEGASEDEFWAAACLRIRTFNHFPPDSFGIDDHKKYLAEHEFEAMKERIAGKRVGFKRVSCINATLPLSEISTLAEDLCSTCKEKQGSCVNEAASPHMKPPIYKGVHAREESERFSDNGEDRVVVGSLDLNQCVRLPDEITGLKPEGIGADFARAYLSNVCVAKELQRNGLGYALVAKAKTIAQDWGISDLYVHVAFDNEGGKKLYMKSGFVYESDEPSWQARFLDRPRRILFWTPLSQSLL
BLAST of ClCG02G004040.1 vs. TrEMBL
Match: A0A0A0K1B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G013950 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 1.8e-129 Identity = 238/304 (78.29%), Postives = 252/304 (82.89%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TrEMBL
Match: M5XG35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010119mg PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 2.0e-88 Identity = 167/270 (61.85%), Postives = 198/270 (73.33%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TrEMBL
Match: A0A067F4Q5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023633mg PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 2.0e-88 Identity = 178/307 (57.98%), Postives = 218/307 (71.01%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TrEMBL
Match: W9RVU4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023026 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 7.7e-88 Identity = 175/304 (57.57%), Postives = 210/304 (69.08%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TrEMBL
Match: D7U1K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01280 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.9e-87 Identity = 176/302 (58.28%), Postives = 213/302 (70.53%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TAIR10
Match: AT4G28030.1 (AT4G28030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 303.5 bits (776), Expect = 1.5e-82 Identity = 165/309 (53.40%), Postives = 196/309 (63.43%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. TAIR10
Match: AT2G39000.1 (AT2G39000.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 5.0e-06 Identity = 22/57 (38.60%), Postives = 32/57 (56.14%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. NCBI nr
Match: gi|659094224|ref|XP_008447948.1| (PREDICTED: uncharacterized protein LOC103490280 isoform X1 [Cucumis melo]) HSP 1 Score: 476.1 bits (1224), Expect = 4.7e-131 Identity = 246/315 (78.10%), Postives = 256/315 (81.27%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. NCBI nr
Match: gi|778722997|ref|XP_011658599.1| (PREDICTED: uncharacterized protein LOC101206225 [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 2.6e-129 Identity = 238/304 (78.29%), Postives = 252/304 (82.89%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. NCBI nr
Match: gi|641843474|gb|KDO62374.1| (hypothetical protein CISIN_1g023633mg [Citrus sinensis]) HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88 Identity = 178/307 (57.98%), Postives = 218/307 (71.01%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. NCBI nr
Match: gi|596202432|ref|XP_007223715.1| (hypothetical protein PRUPE_ppa010119mg [Prunus persica]) HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88 Identity = 167/270 (61.85%), Postives = 198/270 (73.33%), Query Frame = 1
BLAST of ClCG02G004040.1 vs. NCBI nr
Match: gi|645233887|ref|XP_008223557.1| (PREDICTED: uncharacterized protein LOC103323347 [Prunus mume]) HSP 1 Score: 332.8 bits (852), Expect = 6.4e-88 Identity = 169/276 (61.23%), Postives = 200/276 (72.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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