ClCG01G017490.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G017490.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	formin homolog 6 LENGTH=899
Location	CG_Chr01 : 32046639 .. 32047472 (+)
Sequence length	834

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

mRNA sequence

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

Coding sequence (CDS)

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAACCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

Protein sequence

MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAKGTSPLPYLEDSSIKQDAASTPPHPTTTL

Homology

[Close]

BLAST of ClCG01G017490.1 vs. Swiss-Prot
Match: FH6_ARATH (Formin-like protein 6 OS=Arabidopsis thaliana GN=FH6 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 110/271 (40.59%), Postives = 137/271 (50.55%), Query Frame = 1


Query: 23  VNANSQRRSLHQPLDPTT-------FSSPPSPP----PPLGSADSNQPTP---------- 82
           V++ + RR LHQPL P +       F S PSPP    P       N  TP          
Sbjct: 22  VSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQQTLFPPPPP 81

Query: 83  ---APSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSR 142
              A  N  LP +P++T QS KP K + IV SV IVTLGMLSALAFFLYR + K+   ++
Sbjct: 82  PVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRHKAKHASDTQ 141

Query: 143 MLV----EKERSLSFRPDSGIP---PSSFLNFGTMERRPCSIIERKGG-KGEDQSSPHRP 202
            LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G   SSP+R 
Sbjct: 142 KLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNGPVNSSPYRK 201

Query: 203 VDSVNKLDSHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETVFHTPEWSAA 254
           ++S  + + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T F+TP  SA 
Sbjct: 202 LNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTAFYTPHGSAI 261

[Close]

BLAST of ClCG01G017490.1 vs. Swiss-Prot
Match: FH8_ORYSJ (Formin-like protein 8 OS=Oryza sativa subsp. japonica GN=FH8 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 85/325 (26.15%), Postives = 116/325 (35.69%), Query Frame = 1


Query: 3   PSFLIFFLSLDLLVLLNHPRVNANS-------QRRSLHQPLDPTTFSSPPSPPPP----L 62
           P  +  F+++  ++L  H  V A S        RR LHQPL P  ++ PPSPPPP     
Sbjct: 2   PPAIARFVAIAAVLLCGHVAVAAESGGVGGGSARRVLHQPLFPIEWTPPPSPPPPPAPDF 61

Query: 63  GSADSNQPTP-APSNVSLPNLPSSTQQSFKP----------------------------- 122
            S  S  P P APS    P  P +T     P                             
Sbjct: 62  TSDPSTPPAPDAPSGDFFPPAPPTTTTPTSPGTTPSPTTVAADVSKTPSGSGSGHHGGGP 121

Query: 123 ----IKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPP 182
               I   G   + A+  LG   A   FL   R + R  S+ L+  +R+ + R  +    
Sbjct: 122 TKATIVAAGAGAAAAVALLGFACA---FLITGRARRRGDSQKLLGPDRAGAHR-SAATSA 181

Query: 183 SSFLNFGTMERRPCSIIERKGGKGED-QSSPHRPVDSVNKL-------DSHLLSPELQPL 242
           + FL  GT+E  P +     G    D   SP+R + S           D+   SPEL+PL
Sbjct: 182 ADFLYVGTVE--PTTPARHHGPTTADLVGSPYRKLRSERARRGVSRDEDADHPSPELRPL 241

Query: 243 PPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAK 274
           PPL +   +            S E  ++TP   +  S GGG        S +        
Sbjct: 242 PPLRRAATLG----------SSDEDGYYTPRQLSGGSGGGGAAEAWSSASASSPPTTTTA 301

HSP 2 Score: 35.0 bits (79), Expect = 1.5e+00
Identity = 18/47 (38.30%), Postives = 22/47 (46.81%), Query Frame = 1


Query: 40  TFSSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLG 87
           T   PP PPPP  S  SN   P P+    P +P+S ++  KP+   G
Sbjct: 369 TAPKPPPPPPPPPSVPSNNNLPKPAEP--PAVPTSRRRLLKPLPPEG 413

[Close]

BLAST of ClCG01G017490.1 vs. Swiss-Prot
Match: FH9_ARATH (Formin-like protein 9 OS=Arabidopsis thaliana GN=FH9 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 65/230 (28.26%), Postives = 90/230 (39.13%), Query Frame = 1


Query: 35  PLDPTTF---SSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQ-----QSFKP---IK 94
           P+ P  F   SSPPSPPPPL       PTP  +    P  P++       +S KP     
Sbjct: 47  PISPPFFPLESSPPSPPPPL------PPTPPTTFAVFPTFPANISALVLPRSSKPHHTSP 106

Query: 95  TLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFL-N 154
           TL +    A++ +  +  LA FLY    ++R ++R L     S S     G   S    N
Sbjct: 107 TLLLPALSAVLVIATVIGLALFLYG---RHRGQTRHLKNSHCSSSNTSSYGDEQSHITTN 166

Query: 155 FGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSF 214
           F        S +         + S H        L     SPE++PLPPL      + ++
Sbjct: 167 FNMAATTSPSEVFYLN----TEESDHIRTGGTFFLKQD--SPEIRPLPPLPPRSFHHNNY 226

Query: 215 ETPLS--DDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAKG 251
           ET ++  D+E  E VF +P  S          P S   S +HS +    G
Sbjct: 227 ETEVNEEDEEEEEDVFFSPMAS---------LPGSANSSPSHSCSSSCSG 252

[Close]

BLAST of ClCG01G017490.1 vs. TrEMBL
Match: A0A0A0KIH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495090 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.9e-122
Identity = 238/287 (82.93%), Postives = 247/287 (86.06%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPP------LGSA 60
           MK SFLIF LSLD  V+LNH RVN +S RRSLHQPLDP TFSSPPSPPPP      L SA
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPLESA 60

Query: 61  DSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120
            S+QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR
Sbjct: 61  HSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120

Query: 121 CKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSV 180
            KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERKGGKGED SSP R VDSV
Sbjct: 121 YKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSV 180

Query: 181 NKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPK 240
            KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG    
Sbjct: 181 KKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---- 240

Query: 241 SKRESRNHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPHPTTT 277
            KRESRN+SL+V+ K GTSPLPYLEDS IKQD    AAS PPHPTTT
Sbjct: 241 -KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

[Close]

BLAST of ClCG01G017490.1 vs. TrEMBL
Match: W9RIZ3_9ROSA (Formin-like protein OS=Morus notabilis GN=L484_009403 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 119/304 (39.14%), Postives = 162/304 (53.29%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLL---NHPRVNANSQRRSLHQPLDPTTF-------------SSPPSPP 64
           + +FFL L  LVL    +   V+  S RR LHQPL P +              SSPP PP
Sbjct: 6   YFVFFLILPQLVLTLTKSFAIVDNLSHRRILHQPLFPASSAPPPGTDDSTVSSSSPPPPP 65

Query: 65  PPLGSADS-----------NQPTPAPSNVSLPN---------LPSSTQQSFKPIKTLGIV 124
           PP   A S           N PTP  S  S P          +P++TQ   KPIK + I 
Sbjct: 66  PPSPDAYSTPDQPFFHEIPNGPTPDQSQQSTPPNSPSNGTVAIPTATQPP-KPIKKVAIA 125

Query: 125 CSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVE-------KERSLSFRPDSGIPPSSFL 184
            SV IVTLGMLSALAFFLYR R+K+  +++ LV        ++ S SF  DS +PPSSF+
Sbjct: 126 ISVGIVTLGMLSALAFFLYRHRVKHPSETQKLVAGGGGGGGRDNSQSFTEDSRVPPSSFI 185

Query: 185 NFGTMERRPCSIIERKGGKGED---QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIV 244
             GTME    S+ E  GG   +     SP+R ++S+ + D +  SPELQPLPPL++   +
Sbjct: 186 YIGTMEPSRTSLSEANGGHSRELAPNKSPYRKLNSIKRSDRYRPSPELQPLPPLAKPPSM 245

Query: 245 NPSFETPLSDDESRETVFHTPEWSAAVSYGGGVF--PKSKRESRNHSLNVQAKGTSPLPY 261
           N       SD+ESRET FH+P+ S +VSY    +  P S++  ++++ N   K + P+P 
Sbjct: 246 NSPSAMDSSDEESRETAFHSPQCS-SVSYDDSYYYTPVSRQSGKSNNGNASVKSSIPMPS 305

[Close]

BLAST of ClCG01G017490.1 vs. TrEMBL
Match: A0A0A0LJI8_CUCSA (Formin-like protein OS=Cucumis sativus GN=Csa_2G271460 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 119/311 (38.26%), Postives = 158/311 (50.80%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQ---RRSLHQPLDPTTFS-------SPPSPPPPLGSA 64
           F IFFL L          +  +S    RR LHQPL P           SPP PPPP   A
Sbjct: 11  FFIFFLPL-FFTFFTATALTFDSYIPYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPA 70

Query: 65  DS-------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSA 124
           D              +QP P+ SN ++P +P++T Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 71  DDQPFFHELPTTPDQSQPPPSSSNGTMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSA 130

Query: 125 LAFFLYRQRIKYRCKSRMLVEKERSLS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGK 184
           LAFFLYR R K+  +S+ LV    +   F  DS  PPSSF   GT+E    S++E+ G  
Sbjct: 131 LAFFLYRHRAKHPGESQKLVGGSNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGAN 190

Query: 185 GEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPE 244
           G + SSP+R ++S+ + D +  SPELQPLPPL +  +         SD+ES +T FHTP+
Sbjct: 191 GAN-SSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESLDTAFHTPQ 250

Query: 245 WSAAVSYGGGVFPKSKRES-----------RNHSLN-------VQAKGTSPLPYLEDSSI 274
            S+ VS+  G F  + R S           +N  +N         +K TSP      SS 
Sbjct: 251 CSSIVSHEDGYFSPASRRSNSVKSCSAASYKNDHMNSNPPPPIPHSKRTSPKSRFSVSST 310

[Close]

BLAST of ClCG01G017490.1 vs. TrEMBL
Match: F6HST7_VITVI (Formin-like protein OS=Vitis vinifera GN=VIT_07s0129g00220 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 121/296 (40.88%), Postives = 166/296 (56.08%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTF-----SSPPSPPP---------- 64
           F +FF+ L  L    H    A SQRR LHQPL P +       SPP PPP          
Sbjct: 6   FYLFFVLL--LSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQ 65

Query: 65  ------PLG-SADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 124
                 P G + D++QP PA +N + P +P++TQ + KP K + I  SV IVTLGMLSAL
Sbjct: 66  PFFPEVPTGPTTDASQPPPATTNGTAP-IPTATQPT-KPTKKVAIAISVGIVTLGMLSAL 125

Query: 125 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 184
           AFFLYR R+K+  +S+ LV    S SF+ +S +PPSSFL  GT+E    S  E  G  G 
Sbjct: 126 AFFLYRHRVKHPGESQKLV-GGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGT 185

Query: 185 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFET-PLSDDESRETVFHTPEW 244
           +  SP+  ++S+ + D +  SPELQPLPPL+   + N S +    SD+E  ETVF+TP+ 
Sbjct: 186 N-GSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQA 245

Query: 245 SAAVSYGGGVFPKSKRESR--NHSLNVQAK----GTSPLPYLEDSSIKQDAASTPP 272
           S+  +  G   P S++ S   N S    AK    GTSP+P+ + +S K   +++ P
Sbjct: 246 SSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASSP 295

[Close]

BLAST of ClCG01G017490.1 vs. TrEMBL
Match: K4BD43_SOLLC (Formin-like protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 118/313 (37.70%), Postives = 156/313 (49.84%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLN---HPRVNANSQRRSLHQPLDPTTFSSPP----SPPPPLGS 60
           M+ + L  F  L LL          V     RR LHQPL P + + PP    SPPPP   
Sbjct: 1   MRAAGLSIFFILSLLSSFTCQFQDLVVKEKNRRILHQPLFPVSSTPPPDSEISPPPPAEP 60

Query: 61  ADS----------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLG 120
            +S                +QP   P+N   P   S   Q+ KP+K + I  SV IVTLG
Sbjct: 61  VNSQPFFPEVPTGTTPDQTHQPQVTPAN-GTPVSNSVATQTAKPVKKVAIAISVGIVTLG 120

Query: 121 MLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERK 180
           MLSALAF+LY+ R+K+  +++ LV +        +S  PPS+FL  GT+E  P +     
Sbjct: 121 MLSALAFYLYKHRVKHPDETQKLVRRNSDQRINEESRTPPSTFLYIGTVE--PPAKTSAM 180

Query: 181 GGKGEDQSSPHRPVDSVNKLDS-HLLSPELQPLPPLSQNQIVNPSFETPL----SDDESR 240
               +   SP+R + SV ++DS +  SP+LQPLPPLS+ Q   PS  +P     SD+ES 
Sbjct: 181 TDSNDATGSPYRKLSSVKRMDSRYRPSPDLQPLPPLSKPQ-PPPSINSPTAMSSSDEESH 240

Query: 241 ETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNV--QAKGTSPLPYLEDS---------- 274
           +T FHTP+ S  VS   G +  S RES + + N    +K TSP   L DS          
Sbjct: 241 DTAFHTPQGS-TVSNEEGYYTPSLRESYSSNKNYVPYSKRTSPRSRLSDSSAEVKHTMIP 300

[Close]

BLAST of ClCG01G017490.1 vs. TAIR10
Match: AT5G67470.1 (AT5G67470.1 formin homolog 6)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 110/271 (40.59%), Postives = 137/271 (50.55%), Query Frame = 1


Query: 23  VNANSQRRSLHQPLDPTT-------FSSPPSPP----PPLGSADSNQPTP---------- 82
           V++ + RR LHQPL P +       F S PSPP    P       N  TP          
Sbjct: 22  VSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQQTLFPPPPP 81

Query: 83  ---APSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSR 142
              A  N  LP +P++T QS KP K + IV SV IVTLGMLSALAFFLYR + K+   ++
Sbjct: 82  PVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRHKAKHASDTQ 141

Query: 143 MLV----EKERSLSFRPDSGIP---PSSFLNFGTMERRPCSIIERKGG-KGEDQSSPHRP 202
            LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G   SSP+R 
Sbjct: 142 KLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNGPVNSSPYRK 201

Query: 203 VDSVNKLDSHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETVFHTPEWSAA 254
           ++S  + + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T F+TP  SA 
Sbjct: 202 LNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTAFYTPHGSAI 261

[Close]

BLAST of ClCG01G017490.1 vs. TAIR10
Match: AT5G48360.1 (AT5G48360.1 Actin-binding FH2 (formin homology 2) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 8.1e-08
Identity = 65/230 (28.26%), Postives = 90/230 (39.13%), Query Frame = 1


Query: 35  PLDPTTF---SSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQ-----QSFKP---IK 94
           P+ P  F   SSPPSPPPPL       PTP  +    P  P++       +S KP     
Sbjct: 47  PISPPFFPLESSPPSPPPPL------PPTPPTTFAVFPTFPANISALVLPRSSKPHHTSP 106

Query: 95  TLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFL-N 154
           TL +    A++ +  +  LA FLY    ++R ++R L     S S     G   S    N
Sbjct: 107 TLLLPALSAVLVIATVIGLALFLYG---RHRGQTRHLKNSHCSSSNTSSYGDEQSHITTN 166

Query: 155 FGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSF 214
           F        S +         + S H        L     SPE++PLPPL      + ++
Sbjct: 167 FNMAATTSPSEVFYLN----TEESDHIRTGGTFFLKQD--SPEIRPLPPLPPRSFHHNNY 226

Query: 215 ETPLS--DDESRETVFHTPEWSAAVSYGGGVFPKSKRESRNHSLNVQAKG 251
           ET ++  D+E  E VF +P  S          P S   S +HS +    G
Sbjct: 227 ETEVNEEDEEEEEDVFFSPMAS---------LPGSANSSPSHSCSSSCSG 252

[Close]

BLAST of ClCG01G017490.1 vs. TAIR10
Match: AT3G25500.1 (AT3G25500.1 formin homology 1)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 74/278 (26.62%), Postives = 103/278 (37.05%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFS--SPPSPPP----------PLG 64
           F +FF  L    LL+       + RR LH+P  P      SPPSPPP          P  
Sbjct: 3   FFLFFFYL----LLSSSSDLVFADRRVLHEPFFPIDSPPPSPPSPPPLPKLPFSSTTPPS 62

Query: 65  SADSNQ-------------PTPA-----PSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIV 124
           S+D N              P+PA     P+N+S   +P +T+      K L IV   A+ 
Sbjct: 63  SSDPNASPFFPLYPSSPPPPSPASFASFPANISSLIVPHATKSPPNSKKLL-IVAISAVS 122

Query: 125 TLGMLSALAFFLYRQRIKYRC-------KSRMLVEKERSLSFRPDSGIPP---------- 184
           +  +++ L   LY +R K                +  R +   P +  PP          
Sbjct: 123 SAALVALLIALLYWRRSKRNQDLNFSDDSKTYTTDSSRRVYPPPPATAPPTRRNAEARSK 182

Query: 185 ------------SSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPE 223
                       S FL  GTM  +          +G D+ S      S  KL+    SP+
Sbjct: 183 QRTTTSSTNNNSSEFLYLGTMVNQ----------RGIDEQSLSNNGSSSRKLE----SPD 242

[Close]

BLAST of ClCG01G017490.1 vs. NCBI nr
Match: gi|700193400|gb|KGN48604.1| (hypothetical protein Csa_6G495090 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 2.7e-122
Identity = 238/287 (82.93%), Postives = 247/287 (86.06%), Query Frame = 1


Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPP------LGSA 60
           MK SFLIF LSLD  V+LNH RVN +S RRSLHQPLDP TFSSPPSPPPP      L SA
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPLESA 60

Query: 61  DSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120
            S+QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR
Sbjct: 61  HSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120

Query: 121 CKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSV 180
            KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERKGGKGED SSP R VDSV
Sbjct: 121 YKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSV 180

Query: 181 NKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPK 240
            KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG    
Sbjct: 181 KKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---- 240

Query: 241 SKRESRNHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPHPTTT 277
            KRESRN+SL+V+ K GTSPLPYLEDS IKQD    AAS PPHPTTT
Sbjct: 241 -KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

[Close]

BLAST of ClCG01G017490.1 vs. NCBI nr
Match: gi|703123243|ref|XP_010102774.1| (Formin-like protein 6 [Morus notabilis])

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 119/304 (39.14%), Postives = 162/304 (53.29%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLL---NHPRVNANSQRRSLHQPLDPTTF-------------SSPPSPP 64
           + +FFL L  LVL    +   V+  S RR LHQPL P +              SSPP PP
Sbjct: 6   YFVFFLILPQLVLTLTKSFAIVDNLSHRRILHQPLFPASSAPPPGTDDSTVSSSSPPPPP 65

Query: 65  PPLGSADS-----------NQPTPAPSNVSLPN---------LPSSTQQSFKPIKTLGIV 124
           PP   A S           N PTP  S  S P          +P++TQ   KPIK + I 
Sbjct: 66  PPSPDAYSTPDQPFFHEIPNGPTPDQSQQSTPPNSPSNGTVAIPTATQPP-KPIKKVAIA 125

Query: 125 CSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVE-------KERSLSFRPDSGIPPSSFL 184
            SV IVTLGMLSALAFFLYR R+K+  +++ LV        ++ S SF  DS +PPSSF+
Sbjct: 126 ISVGIVTLGMLSALAFFLYRHRVKHPSETQKLVAGGGGGGGRDNSQSFTEDSRVPPSSFI 185

Query: 185 NFGTMERRPCSIIERKGGKGED---QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIV 244
             GTME    S+ E  GG   +     SP+R ++S+ + D +  SPELQPLPPL++   +
Sbjct: 186 YIGTMEPSRTSLSEANGGHSRELAPNKSPYRKLNSIKRSDRYRPSPELQPLPPLAKPPSM 245

Query: 245 NPSFETPLSDDESRETVFHTPEWSAAVSYGGGVF--PKSKRESRNHSLNVQAKGTSPLPY 261
           N       SD+ESRET FH+P+ S +VSY    +  P S++  ++++ N   K + P+P 
Sbjct: 246 NSPSAMDSSDEESRETAFHSPQCS-SVSYDDSYYYTPVSRQSGKSNNGNASVKSSIPMPS 305

[Close]

BLAST of ClCG01G017490.1 vs. NCBI nr
Match: gi|659115778|ref|XP_008457732.1| (PREDICTED: formin-like protein 6 [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 114/286 (39.86%), Postives = 152/286 (53.15%), Query Frame = 1


Query: 27  SQRRSLHQPLDPTTFS-------SPPSPPPPLGSADS-------------NQPTPAPSNV 86
           S RR LHQPL P           SPP PPPP   AD              +QP P+ SN 
Sbjct: 35  SYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPADDQPFFHELPTSPDQSQPPPSSSNG 94

Query: 87  SLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERS 146
           ++P +P++T Q  KP KT+ I  SV IVTLGMLSALAFFLYR R K+  +S+ LV    +
Sbjct: 95  TMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNN 154

Query: 147 LS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPE 206
              F  DS  PPSSF   GT+E    S++E+ G  G + SSP+R ++S+ + D +  SPE
Sbjct: 155 PERFMEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGAN-SSPYRKLNSIKRSDRYRPSPE 214

Query: 207 LQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRES------ 266
           LQPLPPL +  +V        SD+ES +T FHTP+ S+ VS+  G F  + R S      
Sbjct: 215 LQPLPPLPKPPVVMSPPALSSSDEESLDTAFHTPQCSSIVSHEDGYFSPASRRSNSVKSC 274

Query: 267 -----RNHSLN-------VQAKGTSPLPYLEDSSIKQDAASTPPHP 274
                +N  +N         +K TSP      SS K++++   P P
Sbjct: 275 STATYKNDHINSNPPPPIPHSKRTSPKSRFSVSSTKRNSSQPQPPP 318

[Close]

BLAST of ClCG01G017490.1 vs. NCBI nr
Match: gi|778669821|ref|XP_011649306.1| (PREDICTED: formin-like protein 6 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 119/311 (38.26%), Postives = 158/311 (50.80%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQ---RRSLHQPLDPTTFS-------SPPSPPPPLGSA 64
           F IFFL L          +  +S    RR LHQPL P           SPP PPPP   A
Sbjct: 11  FFIFFLPL-FFTFFTATALTFDSYIPYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPA 70

Query: 65  DS-------------NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSA 124
           D              +QP P+ SN ++P +P++T Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 71  DDQPFFHELPTTPDQSQPPPSSSNGTMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSA 130

Query: 125 LAFFLYRQRIKYRCKSRMLVEKERSLS-FRPDSGIPPSSFLNFGTMERRPCSIIERKGGK 184
           LAFFLYR R K+  +S+ LV    +   F  DS  PPSSF   GT+E    S++E+ G  
Sbjct: 131 LAFFLYRHRAKHPGESQKLVGGSNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGAN 190

Query: 185 GEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPE 244
           G + SSP+R ++S+ + D +  SPELQPLPPL +  +         SD+ES +T FHTP+
Sbjct: 191 GAN-SSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESLDTAFHTPQ 250

Query: 245 WSAAVSYGGGVFPKSKRES-----------RNHSLN-------VQAKGTSPLPYLEDSSI 274
            S+ VS+  G F  + R S           +N  +N         +K TSP      SS 
Sbjct: 251 CSSIVSHEDGYFSPASRRSNSVKSCSAASYKNDHMNSNPPPPIPHSKRTSPKSRFSVSST 310

[Close]

BLAST of ClCG01G017490.1 vs. NCBI nr
Match: gi|225438990|ref|XP_002279613.1| (PREDICTED: formin-like protein 6 [Vitis vinifera])

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 121/296 (40.88%), Postives = 166/296 (56.08%), Query Frame = 1


Query: 5   FLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTF-----SSPPSPPP---------- 64
           F +FF+ L  L    H    A SQRR LHQPL P +       SPP PPP          
Sbjct: 6   FYLFFVLL--LSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQ 65

Query: 65  ------PLG-SADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 124
                 P G + D++QP PA +N + P +P++TQ + KP K + I  SV IVTLGMLSAL
Sbjct: 66  PFFPEVPTGPTTDASQPPPATTNGTAP-IPTATQPT-KPTKKVAIAISVGIVTLGMLSAL 125

Query: 125 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 184
           AFFLYR R+K+  +S+ LV    S SF+ +S +PPSSFL  GT+E    S  E  G  G 
Sbjct: 126 AFFLYRHRVKHPGESQKLV-GGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGT 185

Query: 185 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFET-PLSDDESRETVFHTPEW 244
           +  SP+  ++S+ + D +  SPELQPLPPL+   + N S +    SD+E  ETVF+TP+ 
Sbjct: 186 N-GSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQA 245

Query: 245 SAAVSYGGGVFPKSKRESR--NHSLNVQAK----GTSPLPYLEDSSIKQDAASTPP 272
           S+  +  G   P S++ S   N S    AK    GTSP+P+ + +S K   +++ P
Sbjct: 246 SSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASSP 295

The following BLAST results are available for this feature:

BLAST of ClCG01G017490.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FH6_ARATH	5.5e-30	40.59	Formin-like protein 6 OS=Arabidopsis thaliana GN=FH6 PE=2 SV=1	[more]
FH8_ORYSJ	3.1e-09	26.15	Formin-like protein 8 OS=Oryza sativa subsp. japonica GN=FH8 PE=2 SV=1	[more]
FH9_ARATH	1.4e-06	28.26	Formin-like protein 9 OS=Arabidopsis thaliana GN=FH9 PE=2 SV=2	[more]

BLAST of ClCG01G017490.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH8_CUCSA	1.9e-122	82.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495090 PE=4 SV=1	[more]
W9RIZ3_9ROSA	1.2e-39	39.14	Formin-like protein OS=Morus notabilis GN=L484_009403 PE=3 SV=1	[more]
A0A0A0LJI8_CUCSA	2.9e-38	38.26	Formin-like protein OS=Cucumis sativus GN=Csa_2G271460 PE=3 SV=1	[more]
F6HST7_VITVI	1.4e-37	40.88	Formin-like protein OS=Vitis vinifera GN=VIT_07s0129g00220 PE=3 SV=1	[more]
K4BD43_SOLLC	2.4e-32	37.70	Formin-like protein OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of ClCG01G017490.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67470.1	3.1e-31	40.59	formin homolog 6	[more]
AT5G48360.1	8.1e-08	28.26	Actin-binding FH2 (formin homology 2) family protein	[more]
AT3G25500.1	2.0e-06	26.62	formin homology 1	[more]

BLAST of ClCG01G017490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193400\|gb\|KGN48604.1\|	2.7e-122	82.93	hypothetical protein Csa_6G495090 [Cucumis sativus]	[more]
gi\|703123243\|ref\|XP_010102774.1\|	1.7e-39	39.14	Formin-like protein 6 [Morus notabilis]	[more]
gi\|659115778\|ref\|XP_008457732.1\|	3.8e-39	39.86	PREDICTED: formin-like protein 6 [Cucumis melo]	[more]
gi\|778669821\|ref\|XP_011649306.1\|	4.2e-38	38.26	PREDICTED: formin-like protein 6 [Cucumis sativus]	[more]
gi\|225438990\|ref\|XP_002279613.1\|	2.1e-37	40.88	PREDICTED: formin-like protein 6 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0044424	intracellular part
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G017490	ClCG01G017490	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G017490.1	ClCG01G017490.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G017490.1.cds1	ClCG01G017490.1.cds1	CDS