ClCG01G008320.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTCTCCATAACCCCTCTGATTTCGCGTTCTGCTCTTTCTTCAGCTCTCTCCCTCAGAATTTATTATCCTCTTCAAATGGAATCCTAATACGTGAGATCGTTCTTGATAGTCCCTTAAGATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGTTTCGTCTCATTCTCTTTTTTCTCCATTTCTTATTTTTTGATTTTGTTCTAATTTGGGTGTAGTTTTCTTTTACCCTTTTGCATTTTATATCCATTTCGTATGCTCTGGTTTGCCCTCAATTGCGTAACTGCATTCTGGAACCACTACCCATGATTGTTGCATTGTTTTTCTTTGATGGGCATTTTGATTTTCTTTTAGAAATTTTCATTTCATTGTTGTTTGTGTTGTTTGAAAGTCATCGGATCTATGGGGGTGGGTAGAGATGGTGATGGCTATAATTTATGCTAATTTCTTTGATTATGAATTTCAACACATTAATATATTGTATAAATCTGAAGAGATTGAATTCCCATTGCTCTGCTGAATATCCAGTGAAGTTTCTTATGAATTAAGGAAAAAAAAATCCCTTGAATGAAGTGACCCATATGGAGGATTTCTTATTCACTTTTGGCTACTTGATTTTGTATTATTTTCACTTTTACGAGCAGGACCGAATCTTTTCTTTTTATATAAGAGGCAAAATTTTATATTGCAACTTTTTGTGTATAAATTGTTGGAAACCAAAAAAATTAGAGGGAAAACTAGATGAAAATCTGTAAAATCTAGCCTTTATATTCAAGTTTTAAATCTAAGATAAATTAGTAGTAATTACTCCCCCTTTCCAAGTTTTTTCTTTCCCTTACGGTCTCCCTCCATTTACCATAAATGAAATTTTATGTTGTTACTCCAAAGTTCTTTGTATTTGGGCTTGAGCAATATCTTATCTTCTATGTCTTTCTTTGTTGTATAATACATAATTTTATCTCTAGTAATAGAATTAACACGTTTATATCCAGATATGTTCTCCTGTGAACAAATTGGGGAGGTGATGTGATATGTTCTCCTTCTCCTGTTTGCTCTACTTCTCAAAGTCTTTGAATATGGCACTCAAAGTCTGCTTTTTGGTTGATATATAGAATTATTCATCCCTTTCAGATTTGTGCATAATTGGCCTTCCACTTAGAGTGATGGAATTGTATATTCTTGACATCATGGAAAAATTTATTTATTTGCTGGACAGCGGCATCGAACATTCTTTCTAGGTCGGGTGGCCATGGGATTGGTTCATTACTTAGATGTTTAAAGTGGCTTTGAAAGCTATTAGATAATAGTTTTCCTAGTGTGCGTTTTGAGGTTATCTTTTCTAATGAACGTGTATTTGCTCTTTCCTTTGAGTGGGAAAGTCAGAAGTTGATGAGGCAGAGGAAGGTTTTTTCTTAACGTATTGTTGCATGTTGATCAAATAACATAGAGGAAATTCCTTGTGAATATGAAAAGGTGTGGAAATATATCATTCTTAAGTGACTCATTGATCCCAATTATCAGTAGAAGTCTCTCTTTAAATGCTACAACTTTTGTAAGTAATCAGTTCTAAGTGATGAATATTGGCATTTTGACTTGGTTACTTATATTACTCCAGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG ATCTTCTCCATAACCCCTCTGATTTCGCGTTCTGCTCTTTCTTCAGCTCTCTCCCTCAGAATTTATTATCCTCTTCAAATGGAATCCTAATACGTGAGATCGTTCTTGATAGTCCCTTAAGATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGTTCTAAGTGATGAATATTGGCATTTTGACTTGGTTACTTATATTACTCCAGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG ATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGTTCTAAGTGATGAATATTGGCATTTTGACTTGGTTACTTATATTACTCCAGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG MGVLSNKISREELRPGDHIYSWRQAYIYAHHVLSDEYWHFDLVTYITPGIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSTHSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGTCTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAASFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSSSNAPEEATQTAKEE
BLAST of ClCG01G008320.1 vs. TrEMBL
Match: A0A0A0KMS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315380 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.1e-130 Identity = 236/271 (87.08%), Postives = 243/271 (89.67%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TrEMBL
Match: M5XB55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010318mg PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.9e-103 Identity = 189/272 (69.49%), Postives = 217/272 (79.78%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TrEMBL
Match: W9REN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007793 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102 Identity = 188/271 (69.37%), Postives = 214/271 (78.97%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TrEMBL
Match: A9P901_POPTR (NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07690g PE=2 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101 Identity = 191/271 (70.48%), Postives = 210/271 (77.49%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TrEMBL
Match: I1MBP6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G208400 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101 Identity = 188/272 (69.12%), Postives = 216/272 (79.41%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TAIR10
Match: AT3G02700.1 (AT3G02700.1 NC domain-containing protein-related) HSP 1 Score: 329.7 bits (844), Expect = 1.7e-90 Identity = 165/269 (61.34%), Postives = 198/269 (73.61%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TAIR10
Match: AT5G06370.1 (AT5G06370.1 NC domain-containing protein-related) HSP 1 Score: 287.3 bits (734), Expect = 9.5e-78 Identity = 143/258 (55.43%), Postives = 176/258 (68.22%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TAIR10
Match: AT5G16360.1 (AT5G16360.1 NC domain-containing protein-related) HSP 1 Score: 258.5 bits (659), Expect = 4.7e-69 Identity = 144/290 (49.66%), Postives = 175/290 (60.34%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TAIR10
Match: AT1G01225.1 (AT1G01225.1 NC domain-containing protein-related) HSP 1 Score: 254.2 bits (648), Expect = 8.9e-68 Identity = 132/275 (48.00%), Postives = 170/275 (61.82%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. TAIR10
Match: AT5G16330.1 (AT5G16330.1 NC domain-containing protein-related) HSP 1 Score: 246.9 bits (629), Expect = 1.4e-65 Identity = 131/256 (51.17%), Postives = 162/256 (63.28%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. NCBI nr
Match: gi|659126335|ref|XP_008463130.1| (PREDICTED: uncharacterized protein LOC103501354 [Cucumis melo]) HSP 1 Score: 480.3 bits (1235), Expect = 2.2e-132 Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. NCBI nr
Match: gi|449462363|ref|XP_004148910.1| (PREDICTED: uncharacterized protein LOC101207610 isoform X1 [Cucumis sativus]) HSP 1 Score: 474.2 bits (1219), Expect = 1.6e-130 Identity = 236/271 (87.08%), Postives = 243/271 (89.67%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. NCBI nr
Match: gi|778702062|ref|XP_011655130.1| (PREDICTED: uncharacterized protein LOC101207610 isoform X2 [Cucumis sativus]) HSP 1 Score: 420.2 bits (1079), Expect = 2.7e-114 Identity = 206/223 (92.38%), Postives = 212/223 (95.07%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. NCBI nr
Match: gi|645243202|ref|XP_008227870.1| (PREDICTED: uncharacterized protein LOC103327339 [Prunus mume]) HSP 1 Score: 384.0 bits (985), Expect = 2.1e-103 Identity = 189/272 (69.49%), Postives = 218/272 (80.15%), Query Frame = 1
BLAST of ClCG01G008320.1 vs. NCBI nr
Match: gi|1009125432|ref|XP_015879607.1| (PREDICTED: uncharacterized protein LOC107415733 [Ziziphus jujuba]) HSP 1 Score: 384.0 bits (985), Expect = 2.1e-103 Identity = 193/272 (70.96%), Postives = 217/272 (79.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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