ClCG01G003900.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003900.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	At1g62520-like protein
Location	CG_Chr01 : 4156451 .. 4157326 (-)
Sequence length	876

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAAAGCCTTCGAAGACGTTTATCATCCAACCCCTAAAAATCTAATCCCCAGTGCTAGTTGCCGGAAAAGCGTTCAGAGTCTCAAAGACGTCGTCGAAACCACCAAATCGAAGCACAAGAAGCCCAAGCACTCGCCGCCGGAGAAGAAACCGGTTTCCAAAAACCCAAGACTCGTGAAATCGGAACCCGGTTCGACTCCCTGCATCCGGCCTAGAACGAGCGTTTCGTCCCGTCCGTTAATCAGGGCTGACGATCTTATTTTTCCGGCGGTGTCGGAGTTGCCGGAAGGGCACCATTCCCGGAGCGTGGTTGAGATAATCTTTCACACGAGCTGGAGCCCGAAGGCGTTTACGGGTCAGGTCGAAATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCTCGGTTTGAAGAGTATCGCGAAATGGTTAAGGCTAAGGCGGCGATGGGATGCCCCGCCGACGAGGAGAATGCCCGTTGTGTCGCCGATGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCCACGTCCGACTCAGCGAAATACGACGGATACGGCGGCGCGTGGAGTTTCCCAGGGGTACGGGGGTCGTCGGCGGCGGCAGCGATTTGTACGTTCGCCGGAAGCGGGGTGGCCCATGAGAACGCCGGCGGCGGAAGAGGGAGAAGGGCGATGTTAGTATGTCGAGTCATCGCCGGTCGGGTTTCGAAACAGGTGGTGAAACCCGACCCGTTTCTAGAAGGCCGAGTTGGGCTCGACTCAGTGAGTGGGGATAATGGCGAGTTACTCGTGTTCGACTCGCGTGCGGTTCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

mRNA sequence

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAAAGCCTTCGAAGACGTTTATCATCCAACCCCTAAAAATCTAATCCCCAGTGCTAGTTGCCGGAAAAGCGTTCAGAGTCTCAAAGACGTCGTCGAAACCACCAAATCGAAGCACAAGAAGCCCAAGCACTCGCCGCCGGAGAAGAAACCGGTTTCCAAAAACCCAAGACTCGTGAAATCGGAACCCGGTTCGACTCCCTGCATCCGGCCTAGAACGAGCGTTTCGTCCCGTCCGTTAATCAGGGCTGACGATCTTATTTTTCCGGCGGTGTCGGAGTTGCCGGAAGGGCACCATTCCCGGAGCGTGGTTGAGATAATCTTTCACACGAGCTGGAGCCCGAAGGCGTTTACGGGTCAGGTCGAAATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCTCGGTTTGAAGAGTATCGCGAAATGGTTAAGGCTAAGGCGGCGATGGGATGCCCCGCCGACGAGGAGAATGCCCGTTGTGTCGCCGATGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCCACGTCCGACTCAGCGAAATACGACGGATACGGCGGCGCGTGGAGTTTCCCAGGGGTACGGGGGTCGTCGGCGGCGGCAGCGATTTGTACGTTCGCCGGAAGCGGGGTGGCCCATGAGAACGCCGGCGGCGGAAGAGGGAGAAGGGCGATGTTAGTATGTCGAGTCATCGCCGGTCGGGTTTCGAAACAGGTGGTGAAACCCGACCCGTTTCTAGAAGGCCGAGTTGGGCTCGACTCAGTGAGTGGGGATAATGGCGAGTTACTCGTGTTCGACTCGCGTGCGGTTCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

Coding sequence (CDS)

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAAAGCCTTCGAAGACGTTTATCATCCAACCCCTAAAAATCTAATCCCCAGTGCTAGTTGCCGGAAAAGCGTTCAGAGTCTCAAAGACGTCGTCGAAACCACCAAATCGAAGCACAAGAAGCCCAAGCACTCGCCGCCGGAGAAGAAACCGGTTTCCAAAAACCCAAGACTCGTGAAATCGGAACCCGGTTCGACTCCCTGCATCCGGCCTAGAACGAGCGTTTCGTCCCGTCCGTTAATCAGGGCTGACGATCTTATTTTTCCGGCGGTGTCGGAGTTGCCGGAAGGGCACCATTCCCGGAGCGTGGTTGAGATAATCTTTCACACGAGCTGGAGCCCGAAGGCGTTTACGGGTCAGGTCGAAATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCTCGGTTTGAAGAGTATCGCGAAATGGTTAAGGCTAAGGCGGCGATGGGATGCCCCGCCGACGAGGAGAATGCCCGTTGTGTCGCCGATGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCCACGTCCGACTCAGCGAAATACGACGGATACGGCGGCGCGTGGAGTTTCCCAGGGGTACGGGGGTCGTCGGCGGCGGCAGCGATTTGTACGTTCGCCGGAAGCGGGGTGGCCCATGAGAACGCCGGCGGCGGAAGAGGGAGAAGGGCGATGTTAGTATGTCGAGTCATCGCCGGTCGGGTTTCGAAACAGGTGGTGAAACCCGACCCGTTTCTAGAAGGCCGAGTTGGGCTCGACTCAGTGAGTGGGGATAATGGCGAGTTACTCGTGTTCGACTCGCGTGCGGTTCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

Protein sequence

MAWVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKKPVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHTSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCRVIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL

Homology

[Close]

BLAST of ClCG01G003900.1 vs. TrEMBL
Match: A0A0A0KR76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160780 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.2e-159
Identity = 279/291 (95.88%), Postives = 285/291 (97.94%), Query Frame = 1


Query: 1   MAWVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60
           MAWVKSLQCKS+AFEDVYHP+PKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPSPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120
           PVSKNPRL KSEPGSTP  RPR SVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPSSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 SWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180
           SWSPKAFTG+VEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR
Sbjct: 121 SWSPKAFTGRVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCR 240
           FHCMGPTSDSAKYDG GGAWSFPG+RG S+AAAICTFAGSGVAHENAGGGRGRRAMLVCR
Sbjct: 181 FHCMGPTSDSAKYDGCGGAWSFPGMRGLSSAAAICTFAGSGVAHENAGGGRGRRAMLVCR 240

Query: 241 VIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           VIAGRVSKQVVKPDP+LEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 VIAGRVSKQVVKPDPYLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of ClCG01G003900.1 vs. TrEMBL
Match: F6HP97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00220 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 6.2e-108
Identity = 206/289 (71.28%), Postives = 230/289 (79.58%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKKPV 62
           WVKSLQCKSKAFEDVYHP PKNLIP ASCRK VQSLKDV+ETTK K +KPK   P++   
Sbjct: 5   WVKSLQCKSKAFEDVYHPNPKNLIPGASCRKGVQSLKDVIETTKHKPRKPKPPAPKQPSS 64

Query: 63  SKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHTSW 122
           S++ R  K EPGS P  R R SVS+RP  R     FPA++E+PEGH SR+VVEIIFHTSW
Sbjct: 65  SRHQRSPKPEPGSAPVSRARQSVSARPA-RPAAPFFPALAEMPEGHPSRNVVEIIFHTSW 124

Query: 123 SPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMRFH 182
           SPKAF+G++EMIFKVQN  +TV RFEEYREMVK++A  G    E++ARCVADGNEVMRFH
Sbjct: 125 SPKAFSGRIEMIFKVQNLPRTVTRFEEYREMVKSRAGSGGGTWEDDARCVADGNEVMRFH 184

Query: 183 CMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCRVI 242
           C+GPTS    YDG   AW FPG +GS    AICTF+GSG AHE+ GGGRGRRAMLVCRVI
Sbjct: 185 CLGPTSGGV-YDGGAAAWVFPGGKGS----AICTFSGSGGAHESGGGGRGRRAMLVCRVI 244

Query: 243 AGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           AGRVSKQ +  D  LEGRVG DSVSGDNGELLVFD RAVLPCFLIIYKL
Sbjct: 245 AGRVSKQ-IGLDSLLEGRVGFDSVSGDNGELLVFDPRAVLPCFLIIYKL 286

[Close]

BLAST of ClCG01G003900.1 vs. TrEMBL
Match: M5WUZ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009247mg PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.4e-98
Identity = 202/308 (65.58%), Postives = 231/308 (75.00%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKH-------- 62
           WVKSLQCKS+AFEDVYHPTPKNL+ SASCR+SVQ++KDV++TTK  H KP+         
Sbjct: 5   WVKSLQCKSRAFEDVYHPTPKNLMNSASCRQSVQNIKDVIDTTK--HYKPRKLKPLPPAG 64

Query: 63  --SPPEKKPVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRS 122
              PP K+P  K+    K EP S+P  + RT    RP  R  D   PA++ELPEGH SR+
Sbjct: 65  PPRPPSKRPDPKSQLPTKPEPDSSPGQQTRT----RPK-RPHDPFLPALTELPEGHPSRN 124

Query: 123 VVEIIFHTSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAM----GCPADEEN 182
           VVEIIFHTSWSPKAF+G+++MIFKVQNGSKTVARFEEYRE VKA+       G   +EEN
Sbjct: 125 VVEIIFHTSWSPKAFSGRIDMIFKVQNGSKTVARFEEYRESVKARCRAGSKGGAQCEEEN 184

Query: 183 ARCVADGNEVMRFHCMGP-TSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHEN- 242
            RCVADGNEVMRFHC+GP TS    YD  GGAW F G +G     AICTF+GSGVAHEN 
Sbjct: 185 VRCVADGNEVMRFHCLGPTTSGFGVYDTCGGAWGFHGGKGK----AICTFSGSGVAHENA 244

Query: 243 -AGGGRGRRAMLVCRVIAGRVSKQVVKPDPFLEGRV--GLDSVSGDNGELLVFDSRAVLP 292
            AGG RGRRAMLVCRV+AGRVSKQ ++ +  L+GRV  G DSVSGDNGELLVFDSRAVLP
Sbjct: 245 GAGGSRGRRAMLVCRVVAGRVSKQ-LELESLLDGRVGFGFDSVSGDNGELLVFDSRAVLP 300

[Close]

BLAST of ClCG01G003900.1 vs. TrEMBL
Match: A0A061G5C4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016010 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.7e-97
Identity = 196/295 (66.44%), Postives = 230/295 (77.97%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKKPV 62
           WVKSLQCKS+AF+DVYHP PK+LIPS+SCR+S QS+KDV+ETTK+K   PK S P+  P 
Sbjct: 5   WVKSLQCKSRAFDDVYHPNPKHLIPSSSCRRSSQSIKDVIETTKNK---PKKSNPKLLPK 64

Query: 63  SKNPRLVKSEPG-STPCIRPRTSVS--SRPLIRADDLIFPAVSELPEGHHSRSVVEIIFH 122
           S +    KSEP  + P  RPR S S  +RP +R  D + P+++ELPEGH SR+VVEIIFH
Sbjct: 65  SSS----KSEPDLNNPPPRPRRSSSLPARP-VRNPDPVLPSLTELPEGHPSRNVVEIIFH 124

Query: 123 TSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCP--ADEENARCVADGNE 182
           TSWSPKAFTG++EMIFKVQNG +TV RFEEYRE VK ++  G P  ADEENARC+ADGNE
Sbjct: 125 TSWSPKAFTGRIEMIFKVQNGPRTVTRFEEYRETVKTRSGSGGPASADEENARCIADGNE 184

Query: 183 VMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAML 242
           VMRFHC+GPTS +    G    W F G +G    AAICT++GSG AHE+AGGG GRRAML
Sbjct: 185 VMRFHCLGPTSGNC---GMNDTWLFSGGKG----AAICTYSGSGGAHESAGGGTGRRAML 244

Query: 243 VCRVIAGRVSKQV-VKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           VCRVIAGRVSK+V    +  L+GRVG DSVSG+NGELLVFD RAVLPCFLIIYKL
Sbjct: 245 VCRVIAGRVSKRVGFGYESLLDGRVGYDSVSGENGELLVFDPRAVLPCFLIIYKL 284

[Close]

BLAST of ClCG01G003900.1 vs. TrEMBL
Match: A0A0D2RPZ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G237300 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.7e-95
Identity = 193/297 (64.98%), Postives = 227/297 (76.43%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKKPV 62
           WVKSLQCKS+A+EDVYHP+PK LIPS SC +S QS+KDV++T K K KK   + P  K +
Sbjct: 5   WVKSLQCKSRAYEDVYHPSPKYLIPSTSCTRSSQSIKDVIQTAKKKPKK-SDTKPNPKLL 64

Query: 63  SKNPRLVKSEPGSTPCI-RPRTSVSSRP--LIRADDLIFPAVSELPEGHHSRSVVEIIFH 122
           S++    +S+  STP   RPR S SS P   +R  D + PA++ELPEGH SR+VVEIIFH
Sbjct: 65  SRSSSKPESDLNSTPPPPRPRRS-SSMPSRAVRNPDPVLPALTELPEGHPSRNVVEIIFH 124

Query: 123 TSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMG----CPADEENARCVADG 182
           TSWSPKAFTG++EMIFKVQNG +TV+RFEEYRE VK +++ G      ADEENARCVADG
Sbjct: 125 TSWSPKAFTGRIEMIFKVQNGPRTVSRFEEYRETVKTRSSSGSGGPASADEENARCVADG 184

Query: 183 NEVMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRA 242
           NEVMRFHC+GPT+ S    G    W F G +G    AAICT++GSG AHE AGGG GR+A
Sbjct: 185 NEVMRFHCLGPTAGSC---GMNEKWLFSGGKG----AAICTYSGSGGAHERAGGGMGRKA 244

Query: 243 MLVCRVIAGRVSKQV-VKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           MLVCRVIAGRVSK+V +  +  LEGRVG DSVSGDNGELLVFD RAVLPCFLIIYKL
Sbjct: 245 MLVCRVIAGRVSKRVGLGYETLLEGRVGCDSVSGDNGELLVFDPRAVLPCFLIIYKL 292

[Close]

BLAST of ClCG01G003900.1 vs. TAIR10
Match: AT1G62520.1 (AT1G62520.1 unknown protein)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-82
Identity = 178/300 (59.33%), Postives = 207/300 (69.00%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHP----------TPKNLIPSASCRKSVQSLKDVVETTKSKHKKP 62
           WVKSLQCKSKAF+DVY+P          +PK+L+ S SCRKS QSLKDV+ET     KKP
Sbjct: 5   WVKSLQCKSKAFDDVYNPIKNPNPNPSPSPKHLMSSYSCRKSTQSLKDVIET-----KKP 64

Query: 63  KHSPPEKKPVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRS 122
           K  P  KKP   NP+  K E  + P + P T + S   +R  D   P ++EL EGH SR+
Sbjct: 65  KPKP--KKP---NPKPDKRE--TDPVLSPSTRIRSTG-VRDRDPFLPTLTELSEGHQSRN 124

Query: 123 VVEIIFHTSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCV 182
           VVEIIF TSW PK F+G+VEMIFKVQNGSKT+ RFEEYRE VKA++     A EENAR V
Sbjct: 125 VVEIIFQTSWGPKPFSGRVEMIFKVQNGSKTLTRFEEYREAVKARSV--GKAREENARSV 184

Query: 183 ADGNEVMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRG 242
           ADGNE MRF+C+GP+     Y G G AW   G  G    A+I TFAGS  A+E AGGG+G
Sbjct: 185 ADGNETMRFYCLGPS-----YGGGGSAWGILG--GKGGGASIYTFAGSSTANEKAGGGKG 244

Query: 243 RRAMLVCRVIAGRVSKQ-VVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           R+AMLVCRVIAGRV+KQ  +K D  L  R   DSVSGD+GELLVFD+RAVLPCFLIIY+L
Sbjct: 245 RKAMLVCRVIAGRVTKQNELKYDSDLRSR--FDSVSGDDGELLVFDTRAVLPCFLIIYRL 280

[Close]

BLAST of ClCG01G003900.1 vs. TAIR10
Match: AT4G12450.1 (AT4G12450.1 unknown protein)

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-70
Identity = 155/303 (51.16%), Postives = 193/303 (63.70%), Query Frame = 1


Query: 1   MAWVKSLQCKSKAFEDVYHPTP---KNLIPSASCRKSVQSLKDVVETTKSKHKK-PKHSP 60
           + WVKSL CKSKAF+DVYH      K L+PS SCRK+V   +DVV T     KK PK  P
Sbjct: 3   IGWVKSLHCKSKAFDDVYHHHSNKGKLLLPSYSCRKNV---RDVVNTQPGTVKKNPKPDP 62

Query: 61  PEKKPVS-KNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVE 120
             ++  S + P L  +    T     R SVS+R    + + + P +++LP+GH SR+VVE
Sbjct: 63  SLRRLCSSRRPELDSNSHHPT-----RRSVSARA---SSESVLPVLTDLPDGHPSRNVVE 122

Query: 121 IIFHTSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPAD-------EEN 180
           IIF +SWS   F G+VEMIFKV+NGSK V RFEEYRE VK+++     +D       +EN
Sbjct: 123 IIFQSSWSSDEFPGRVEMIFKVENGSKAVTRFEEYREAVKSRSCSKVDSDRVDGSACDEN 182

Query: 181 ARCVADGNEVMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAG 240
           ARC ADGNE+MRF  +GP          GGAW FPG +G    AA+CTF+GSG AH + G
Sbjct: 183 ARCSADGNEMMRFFPLGPIPGGIN----GGAWGFPGGKG----AAVCTFSGSGEAHASTG 242

Query: 241 GGRGRRAMLVCRVIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLII 292
           GG GRRAML+CRVIAGRV+K         +G  G DSV+G  GEL+VFD+RAVLPCFLI 
Sbjct: 243 GGGGRRAMLICRVIAGRVAK---------KGEFGSDSVAGRAGELIVFDARAVLPCFLIF 277

[Close]

BLAST of ClCG01G003900.1 vs. TAIR10
Match: AT4G22560.1 (AT4G22560.1 unknown protein)

HSP 1 Score: 244.2 bits (622), Expect = 9.9e-65
Identity = 145/294 (49.32%), Postives = 188/294 (63.95%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSAS---CRKSVQSLKDVVETTKSKHKKPKHSPPEK 62
           W+KSLQCKSKAF+DVY+   K+L+ S+S    RKS   +KDV++T  SK K  K  P   
Sbjct: 5   WIKSLQCKSKAFDDVYNFNSKSLMSSSSYNCSRKSSHCVKDVIDTRLSK-KNQKPDP--- 64

Query: 63  KPVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFH 122
                N R  KS    T  + P          R  D    A++ELP+GH SR+VVEIIFH
Sbjct: 65  -----NLRRFKSCRTETELLNPPNRTRRSKSARTSD----ALTELPDGHPSRNVVEIIFH 124

Query: 123 TSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAM-GCPADEENARCVADGNEV 182
           +SWS   F G++EMIFKV++GS+TV RFEEYRE+VK++A   G   +EE+ARC+ADGNE+
Sbjct: 125 SSWSSDEFPGRIEMIFKVEHGSRTVTRFEEYREVVKSRAGFNGGTCEEEDARCLADGNEM 184

Query: 183 MRFHCMGPTSDSAKYDGY-GGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAML 242
           MRF+ +         DG+ GGA  F G +G     A+CTF+GSG A+ ++GGG GR+AM+
Sbjct: 185 MRFYPV--------LDGFNGGACVFAGGKGQ----AVCTFSGSGEAYVSSGGGGGRKAMM 244

Query: 243 VCRVIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           +CRVIAGRV   +           G DSV+G +GEL VFD+RAVLPCFLII++L
Sbjct: 245 ICRVIAGRVDDVI---------GFGSDSVAGRDGELFVFDTRAVLPCFLIIFRL 264

[Close]

BLAST of ClCG01G003900.1 vs. TAIR10
Match: AT4G27240.1 (AT4G27240.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 119.4 bits (298), Expect = 3.7e-27
Identity = 90/249 (36.14%), Postives = 124/249 (49.80%), Query Frame = 1


Query: 69  VKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHTSW-SPKAF 128
           +  +  S  C +     S      A  L   AV+EL EG  SR +VEII  TSW   +  
Sbjct: 189 INGDNSSVSCHKCGEKFSKLEAAEAHHLTKHAVTELMEGDSSRRIVEIICRTSWLKTENQ 248

Query: 129 TGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMRFHCMGPT 188
            G+++ I KV N  KT+ARFEEYR+ VK +A+      +++ RC+ADGNE++RFH  G T
Sbjct: 249 GGRIDRILKVHNMQKTLARFEEYRDTVKIRAS---KLQKKHPRCIADGNELLRFH--GTT 308

Query: 189 SDSAKYDGYGGAWS----------------FPGVRGSSAAAAICTFAGSGVAHENA---- 248
              A   G  G+ S                F   R  +    + T + S  A E+     
Sbjct: 309 VACAL--GINGSTSLCSSEKCCVCRIIRNGFSAKREMNNGIGVFTASTSERAFESIVIGD 368

Query: 249 GGGRGRRAMLVCRVIAGRVSKQVVKPDPFLEGRVGLDSVSGDNG------ELLVFDSRAV 291
           GGG  R+A++VCRVIAGRV + V   +       G DS++G  G      EL + +SRA+
Sbjct: 369 GGGGDRKALIVCRVIAGRVHRPVENVEEMGGLLSGFDSLAGKVGLYTNVEELYLLNSRAL 428

[Close]

BLAST of ClCG01G003900.1 vs. TAIR10
Match: AT2G29660.1 (AT2G29660.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 115.2 bits (287), Expect = 7.0e-26
Identity = 87/222 (39.19%), Postives = 113/222 (50.90%), Query Frame = 1


Query: 100 AVSELPEGHHSRSVVEIIFHTSWSPKAF--TGQVEMIFKVQNGSKTVARFEEYREMVKAK 159
           AVSEL  G  S ++V+IIF + W  +    +  +  I K+ N SK + RFEEYRE VKAK
Sbjct: 150 AVSELIAGESSTNIVKIIFKSGWPEQGNYKSPVINRILKIHNSSKILTRFEEYREFVKAK 209

Query: 160 AAM--GCPADEENARCVADGNEVMRFHC---MGPTSDSAKYDGYGGAW-SFPGVRGSSAA 219
           AA   G     ++ RCVADGNE++RF+C   M     + K +  G  + S  G+ GS  +
Sbjct: 210 AARSNGGGRRWDDERCVADGNELLRFYCSTFMCDLGQNGKSNLCGHQYCSICGIIGSGFS 269

Query: 220 A---AICTFAGSGVAH--------ENAGGGRGRRAMLVCRVIAGRVSKQVVKPDPF-LEG 279
                I T A     H        E  G    +RAMLVCRV+AGRV   ++  D      
Sbjct: 270 PKLDGIATLATGWRGHVAVPEEVEEEFGFMNVKRAMLVCRVVAGRVGCDLIDDDDVDKSD 329

Query: 280 RVGLDSVSGDNG------------ELLVFDSRAVLPCFLIIY 290
             G DS+ G +G            ELLVF+ RAVLPCF+I+Y
Sbjct: 330 GGGYDSLVGQSGNKSGALLRIDDDELLVFNPRAVLPCFVIVY 371

[Close]

BLAST of ClCG01G003900.1 vs. NCBI nr
Match: gi|659073546|ref|XP_008437118.1| (PREDICTED: uncharacterized protein LOC103482634 [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 1.6e-160
Identity = 279/291 (95.88%), Postives = 285/291 (97.94%), Query Frame = 1


Query: 1   MAWVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60
           MAWVKSLQCKS+AFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120
           PVSKNPRL KSEPGSTPC RPR SVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPCSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 SWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180
           SWSPKAFTG++EMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR
Sbjct: 121 SWSPKAFTGRIEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCR 240
           FHCMGPTSDSAKYDG GGAWSFPG+RG S+ AAICTFAGSGVAHENAGGGRGRRAMLVCR
Sbjct: 181 FHCMGPTSDSAKYDGCGGAWSFPGMRGLSSTAAICTFAGSGVAHENAGGGRGRRAMLVCR 240

Query: 241 VIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           VIAGRVSKQVVKPDPF+EGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 VIAGRVSKQVVKPDPFVEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of ClCG01G003900.1 vs. NCBI nr
Match: gi|449459714|ref|XP_004147591.1| (PREDICTED: uncharacterized protein LOC101215943 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 1.7e-159
Identity = 279/291 (95.88%), Postives = 285/291 (97.94%), Query Frame = 1


Query: 1   MAWVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60
           MAWVKSLQCKS+AFEDVYHP+PKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPSPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120
           PVSKNPRL KSEPGSTP  RPR SVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPSSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 SWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180
           SWSPKAFTG+VEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR
Sbjct: 121 SWSPKAFTGRVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCR 240
           FHCMGPTSDSAKYDG GGAWSFPG+RG S+AAAICTFAGSGVAHENAGGGRGRRAMLVCR
Sbjct: 181 FHCMGPTSDSAKYDGCGGAWSFPGMRGLSSAAAICTFAGSGVAHENAGGGRGRRAMLVCR 240

Query: 241 VIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           VIAGRVSKQVVKPDP+LEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 VIAGRVSKQVVKPDPYLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of ClCG01G003900.1 vs. NCBI nr
Match: gi|359474353|ref|XP_002265516.2| (PREDICTED: uncharacterized protein LOC100257409 [Vitis vinifera])

HSP 1 Score: 398.7 bits (1023), Expect = 8.9e-108
Identity = 206/289 (71.28%), Postives = 230/289 (79.58%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKKPV 62
           WVKSLQCKSKAFEDVYHP PKNLIP ASCRK VQSLKDV+ETTK K +KPK   P++   
Sbjct: 5   WVKSLQCKSKAFEDVYHPNPKNLIPGASCRKGVQSLKDVIETTKHKPRKPKPPAPKQPSS 64

Query: 63  SKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHTSW 122
           S++ R  K EPGS P  R R SVS+RP  R     FPA++E+PEGH SR+VVEIIFHTSW
Sbjct: 65  SRHQRSPKPEPGSAPVSRARQSVSARPA-RPAAPFFPALAEMPEGHPSRNVVEIIFHTSW 124

Query: 123 SPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMRFH 182
           SPKAF+G++EMIFKVQN  +TV RFEEYREMVK++A  G    E++ARCVADGNEVMRFH
Sbjct: 125 SPKAFSGRIEMIFKVQNLPRTVTRFEEYREMVKSRAGSGGGTWEDDARCVADGNEVMRFH 184

Query: 183 CMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGRRAMLVCRVI 242
           C+GPTS    YDG   AW FPG +GS    AICTF+GSG AHE+ GGGRGRRAMLVCRVI
Sbjct: 185 CLGPTSGGV-YDGGAAAWVFPGGKGS----AICTFSGSGGAHESGGGGRGRRAMLVCRVI 244

Query: 243 AGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           AGRVSKQ +  D  LEGRVG DSVSGDNGELLVFD RAVLPCFLIIYKL
Sbjct: 245 AGRVSKQ-IGLDSLLEGRVGFDSVSGDNGELLVFDPRAVLPCFLIIYKL 286

[Close]

BLAST of ClCG01G003900.1 vs. NCBI nr
Match: gi|1009119852|ref|XP_015876606.1| (PREDICTED: uncharacterized protein LOC107413225 [Ziziphus jujuba])

HSP 1 Score: 386.7 bits (992), Expect = 3.5e-104
Identity = 203/298 (68.12%), Postives = 232/298 (77.85%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKK--PKHSPPEKK 62
           WVKSL CKS+AFEDVYHP+PKNLIPSASCRKSVQ++KDV+ETTK K +K  P   PP K+
Sbjct: 5   WVKSLHCKSRAFEDVYHPSPKNLIPSASCRKSVQNIKDVIETTKPKPRKNRPPPPPPPKQ 64

Query: 63  PVSKNPRLVKS-EPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFH 122
             SK+PR  K  E   +P  R R S  +R   R      PA++ELPEGH SR+VVEIIFH
Sbjct: 65  AGSKHPRPAKPPELPLSPTSRSRVSAPNRSS-RTHYPFLPALTELPEGHPSRNVVEIIFH 124

Query: 123 TSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPA------DEENARCVA 182
           TSWSPKAF G +EMIFKVQNGSK+V RFEEYRE+VK++A  G PA      +EENARCVA
Sbjct: 125 TSWSPKAFNGMIEMIFKVQNGSKSVTRFEEYRELVKSRAGSGSPAGGSAACEEENARCVA 184

Query: 183 DGNEVMRFHCMGPTSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHENAGGGRGR 242
           DGNEVMRFHC+GPTS    YD  G AW+FPG +GS    AICTF+GSG AHE+AGGGRGR
Sbjct: 185 DGNEVMRFHCLGPTSGVGGYDACGSAWTFPGAKGS----AICTFSGSGGAHESAGGGRGR 244

Query: 243 RAMLVCRVIAGRVSKQVVKPDPFLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
           RAMLVCRVIAGRVSKQ +  +  L GRVG DSVSG+NG+LLVFDSRAVLPCF+IIYKL
Sbjct: 245 RAMLVCRVIAGRVSKQ-LGIESLLSGRVGFDSVSGENGDLLVFDSRAVLPCFVIIYKL 296

[Close]

BLAST of ClCG01G003900.1 vs. NCBI nr
Match: gi|595847816|ref|XP_007209406.1| (hypothetical protein PRUPE_ppa009247mg [Prunus persica])

HSP 1 Score: 366.3 bits (939), Expect = 4.9e-98
Identity = 202/308 (65.58%), Postives = 231/308 (75.00%), Query Frame = 1


Query: 3   WVKSLQCKSKAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKH-------- 62
           WVKSLQCKS+AFEDVYHPTPKNL+ SASCR+SVQ++KDV++TTK  H KP+         
Sbjct: 5   WVKSLQCKSRAFEDVYHPTPKNLMNSASCRQSVQNIKDVIDTTK--HYKPRKLKPLPPAG 64

Query: 63  --SPPEKKPVSKNPRLVKSEPGSTPCIRPRTSVSSRPLIRADDLIFPAVSELPEGHHSRS 122
              PP K+P  K+    K EP S+P  + RT    RP  R  D   PA++ELPEGH SR+
Sbjct: 65  PPRPPSKRPDPKSQLPTKPEPDSSPGQQTRT----RPK-RPHDPFLPALTELPEGHPSRN 124

Query: 123 VVEIIFHTSWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAM----GCPADEEN 182
           VVEIIFHTSWSPKAF+G+++MIFKVQNGSKTVARFEEYRE VKA+       G   +EEN
Sbjct: 125 VVEIIFHTSWSPKAFSGRIDMIFKVQNGSKTVARFEEYRESVKARCRAGSKGGAQCEEEN 184

Query: 183 ARCVADGNEVMRFHCMGP-TSDSAKYDGYGGAWSFPGVRGSSAAAAICTFAGSGVAHEN- 242
            RCVADGNEVMRFHC+GP TS    YD  GGAW F G +G     AICTF+GSGVAHEN 
Sbjct: 185 VRCVADGNEVMRFHCLGPTTSGFGVYDTCGGAWGFHGGKGK----AICTFSGSGVAHENA 244

Query: 243 -AGGGRGRRAMLVCRVIAGRVSKQVVKPDPFLEGRV--GLDSVSGDNGELLVFDSRAVLP 292
            AGG RGRRAMLVCRV+AGRVSKQ ++ +  L+GRV  G DSVSGDNGELLVFDSRAVLP
Sbjct: 245 GAGGSRGRRAMLVCRVVAGRVSKQ-LELESLLDGRVGFGFDSVSGDNGELLVFDSRAVLP 300

The following BLAST results are available for this feature:

BLAST of ClCG01G003900.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR76_CUCSA	1.2e-159	95.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160780 PE=4 SV=1	[more]
F6HP97_VITVI	6.2e-108	71.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00220 PE=4 SV=...	[more]
M5WUZ0_PRUPE	3.4e-98	65.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009247mg PE=4 SV=1	[more]
A0A061G5C4_THECC	1.7e-97	66.44	Uncharacterized protein OS=Theobroma cacao GN=TCM_016010 PE=4 SV=1	[more]
A0A0D2RPZ8_GOSRA	2.7e-95	64.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G237300 PE=4 SV=1	[more]

BLAST of ClCG01G003900.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62520.1	1.4e-82	59.33	unknown protein	[more]
AT4G12450.1	1.6e-70	51.16	unknown protein	[more]
AT4G22560.1	9.9e-65	49.32	unknown protein	[more]
AT4G27240.1	3.7e-27	36.14	zinc finger (C2H2 type) family protein	[more]
AT2G29660.1	7.0e-26	39.19	zinc finger (C2H2 type) family protein	[more]

BLAST of ClCG01G003900.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073546\|ref\|XP_008437118.1\|	1.6e-160	95.88	PREDICTED: uncharacterized protein LOC103482634 [Cucumis melo]	[more]
gi\|449459714\|ref\|XP_004147591.1\|	1.7e-159	95.88	PREDICTED: uncharacterized protein LOC101215943 [Cucumis sativus]	[more]
gi\|359474353\|ref\|XP_002265516.2\|	8.9e-108	71.28	PREDICTED: uncharacterized protein LOC100257409 [Vitis vinifera]	[more]
gi\|1009119852\|ref\|XP_015876606.1\|	3.5e-104	68.12	PREDICTED: uncharacterized protein LOC107413225 [Ziziphus jujuba]	[more]
gi\|595847816\|ref\|XP_007209406.1\|	4.9e-98	65.58	hypothetical protein PRUPE_ppa009247mg [Prunus persica]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003950	NAD+ ADP-ribosyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G003900	ClCG01G003900	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G003900.1	ClCG01G003900.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G003900.1.cds1	ClCG01G003900.1.cds1	CDS