Carg27257-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27257-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	scarecrow-like protein 1
Location	Cucurbita_argyrosperma_scaffold_285 : 43129 .. 44787 (+)
Sequence length	1659

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTAGTCAGGCCATCTGATCCGTCTCCGTTATCGTACGGAAGTCGCAAGCTCTACTCGCTGAACGGAACCAAGAATGCTCCTGACTTGTCTGCTCAAAGATTTGGCTCCGAAATGCATAGGAGTGAGAGCTATGAGAAGTATTTCCTTGACTTCCCGATCGAAGAGCTATCGATTTCTGGCGTTTCTGGCATTTCGAACAATTCTTTTCACCCGAACGCTGCTTCATATGGGCGAACGTGTGATTCAGATTCAGCTTGCCTTGAGATTACAAGTCCAGAACAGCTGGATTTTGGGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGGGACCTGTTGGGTGAACCTGATGCTGCTGATTACGATGTCGAGATGCTTGCAAATGGTCAAGCCATGGAAATCGATAGCGAATGGGCGAATTCGATTAAAGATGCACTGCTACACGACTCGCCAAACGAATCCTCGTCGACAGATTCTAATTTCAGTACAACTGGCAGCAACAAGGATGCATCTCAGATGTCTTCACAGAATCCTAGAGAAATGCTTTTAGAATGTGCTTTTGCCATCTCGGAAGACAACTTTGACGAAGCATCAGCCATGATCGAACAGCTCCGAGGTATGGTCTCGGTTCAGGGCGATCCCTCGCAGAGGATCGCTGCGTATATGGTGGAAGGTCTCGCTGCTCGGTTGTTGGCATCGGGAAAATGTCTTTATAAAGCTTTGAGATGCAAAGAACCGCCTTCCTCGGACCGTCTCGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCTTGTTTCAAATTCGGCTTTATGGCTGCAAATTGTGCCATTATCGAGGCAGCGAAAGACGAGAAGAGAATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAATTTGATTCAGATGCTAGCAACTCAGCCAGGGAAGCCACCACACTTGAGGTTAACAGGGGTCGATGATCCCGAATCGGTACATCGACCCATTGGAGGTCTTAAACACATTGGACAAAGACTCGAGCAACTGGCAAAAGCGTTACGAGTTCCATTTGAATTTCAAGCAATTGCCTCGAACACTTCTGATGTCACTCCCTCGATGCTCGCCTCCCGCCACGGAGAAGCAGTCATAGTCAACTTCGCATTTCTGCTTCACCACATGCCAGATGAAAGTGTCTCAACCGTAAATCTACGAGACAAGCTTCTCCGAATGGTTAAGAACTTAAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAACCTATAACTACTTTGCAGCTGTCTACGACACTCTCGATGCGACACTTCCGAGAGAGAGTCAAGACCGAATCAATGTAGAGAGGCAATGCTTGGCAAAGGACATAGTCAACATCGTAGCTTGTGAAGGCGAGGACAGAGTGGAGAGATACGAAGTGGCCGGGAAATGGCGGGCAAGAATGACGATGGCTGGGTTCAGTTCCTGTACGATGAGCCAAAACGTGACCGACCCGATTCGTAAGCTTATCGGGGAGTATTGCGAGAGAAGATTGAAGATGTATGAAGAAATGGGCACAGTTCATTTTGGATGGGAAGAGAAAAGCTTGATTATTACTTCAACATGGAGGTAA

mRNA sequence

ATGTCGTTAGTCAGGCCATCTGATCCGTCTCCGTTATCGTACGGAAGTCGCAAGCTCTACTCGCTGAACGGAACCAAGAATGCTCCTGACTTGTCTGCTCAAAGATTTGGCTCCGAAATGCATAGGAGTGAGAGCTATGAGAAGTATTTCCTTGACTTCCCGATCGAAGAGCTATCGATTTCTGGCGTTTCTGGCATTTCGAACAATTCTTTTCACCCGAACGCTGCTTCATATGGGCGAACGTGTGATTCAGATTCAGCTTGCCTTGAGATTACAAGTCCAGAACAGCTGGATTTTGGGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGGGACCTGTTGGGTGAACCTGATGCTGCTGATTACGATGTCGAGATGCTTGCAAATGGTCAAGCCATGGAAATCGATAGCGAATGGGCGAATTCGATTAAAGATGCACTGCTACACGACTCGCCAAACGAATCCTCGTCGACAGATTCTAATTTCAGTACAACTGGCAGCAACAAGGATGCATCTCAGATGTCTTCACAGAATCCTAGAGAAATGCTTTTAGAATGTGCTTTTGCCATCTCGGAAGACAACTTTGACGAAGCATCAGCCATGATCGAACAGCTCCGAGGTATGGTCTCGGTTCAGGGCGATCCCTCGCAGAGGATCGCTGCGTATATGGTGGAAGGTCTCGCTGCTCGGTTGTTGGCATCGGGAAAATGTCTTTATAAAGCTTTGAGATGCAAAGAACCGCCTTCCTCGGACCGTCTCGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCTTGTTTCAAATTCGGCTTTATGGCTGCAAATTGTGCCATTATCGAGGCAGCGAAAGACGAGAAGAGAATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAATTTGATTCAGATGCTAGCAACTCAGCCAGGGAAGCCACCACACTTGAGGTTAACAGGGGTCGATGATCCCGAATCGGTACATCGACCCATTGGAGGTCTTAAACACATTGGACAAAGACTCGAGCAACTGGCAAAAGCGTTACGAGTTCCATTTGAATTTCAAGCAATTGCCTCGAACACTTCTGATGTCACTCCCTCGATGCTCGCCTCCCGCCACGGAGAAGCAGTCATAGTCAACTTCGCATTTCTGCTTCACCACATGCCAGATGAAAGTGTCTCAACCGTAAATCTACGAGACAAGCTTCTCCGAATGGTTAAGAACTTAAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAACCTATAACTACTTTGCAGCTGTCTACGACACTCTCGATGCGACACTTCCGAGAGAGAGTCAAGACCGAATCAATGTAGAGAGGCAATGCTTGGCAAAGGACATAGTCAACATCGTAGCTTGTGAAGGCGAGGACAGAGTGGAGAGATACGAAGTGGCCGGGAAATGGCGGGCAAGAATGACGATGGCTGGGTTCAGTTCCTGTACGATGAGCCAAAACGTGACCGACCCGATTCGTAAGCTTATCGGGGAGTATTGCGAGAGAAGATTGAAGATGTATGAAGAAATGGGCACAGTTCATTTTGGATGGGAAGAGAAAAGCTTGATTATTACTTCAACATGGAGGTAA

Coding sequence (CDS)

ATGTCGTTAGTCAGGCCATCTGATCCGTCTCCGTTATCGTACGGAAGTCGCAAGCTCTACTCGCTGAACGGAACCAAGAATGCTCCTGACTTGTCTGCTCAAAGATTTGGCTCCGAAATGCATAGGAGTGAGAGCTATGAGAAGTATTTCCTTGACTTCCCGATCGAAGAGCTATCGATTTCTGGCGTTTCTGGCATTTCGAACAATTCTTTTCACCCGAACGCTGCTTCATATGGGCGAACGTGTGATTCAGATTCAGCTTGCCTTGAGATTACAAGTCCAGAACAGCTGGATTTTGGGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGGGACCTGTTGGGTGAACCTGATGCTGCTGATTACGATGTCGAGATGCTTGCAAATGGTCAAGCCATGGAAATCGATAGCGAATGGGCGAATTCGATTAAAGATGCACTGCTACACGACTCGCCAAACGAATCCTCGTCGACAGATTCTAATTTCAGTACAACTGGCAGCAACAAGGATGCATCTCAGATGTCTTCACAGAATCCTAGAGAAATGCTTTTAGAATGTGCTTTTGCCATCTCGGAAGACAACTTTGACGAAGCATCAGCCATGATCGAACAGCTCCGAGGTATGGTCTCGGTTCAGGGCGATCCCTCGCAGAGGATCGCTGCGTATATGGTGGAAGGTCTCGCTGCTCGGTTGTTGGCATCGGGAAAATGTCTTTATAAAGCTTTGAGATGCAAAGAACCGCCTTCCTCGGACCGTCTCGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCTTGTTTCAAATTCGGCTTTATGGCTGCAAATTGTGCCATTATCGAGGCAGCGAAAGACGAGAAGAGAATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAATTTGATTCAGATGCTAGCAACTCAGCCAGGGAAGCCACCACACTTGAGGTTAACAGGGGTCGATGATCCCGAATCGGTACATCGACCCATTGGAGGTCTTAAACACATTGGACAAAGACTCGAGCAACTGGCAAAAGCGTTACGAGTTCCATTTGAATTTCAAGCAATTGCCTCGAACACTTCTGATGTCACTCCCTCGATGCTCGCCTCCCGCCACGGAGAAGCAGTCATAGTCAACTTCGCATTTCTGCTTCACCACATGCCAGATGAAAGTGTCTCAACCGTAAATCTACGAGACAAGCTTCTCCGAATGGTTAAGAACTTAAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAACCTATAACTACTTTGCAGCTGTCTACGACACTCTCGATGCGACACTTCCGAGAGAGAGTCAAGACCGAATCAATGTAGAGAGGCAATGCTTGGCAAAGGACATAGTCAACATCGTAGCTTGTGAAGGCGAGGACAGAGTGGAGAGATACGAAGTGGCCGGGAAATGGCGGGCAAGAATGACGATGGCTGGGTTCAGTTCCTGTACGATGAGCCAAAACGTGACCGACCCGATTCGTAAGCTTATCGGGGAGTATTGCGAGAGAAGATTGAAGATGTATGAAGAAATGGGCACAGTTCATTTTGGATGGGAAGAGAAAAGCTTGATTATTACTTCAACATGGAGGTAA

Protein sequence

MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSISGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR

Homology

[Close]

BLAST of Carg27257-RA vs. NCBI nr
Match: XP_022937118.1 (scarecrow-like protein 1 [Cucurbita moschata] >XP_022937119.1 scarecrow-like protein 1 [Cucurbita moschata] >XP_022937120.1 scarecrow-like protein 1 [Cucurbita moschata] >XP_022937121.1 scarecrow-like protein 1 [Cucurbita moschata] >XP_022937122.1 scarecrow-like protein 1 [Cucurbita moschata])

HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 549/552 (99.46%), Postives = 551/552 (99.82%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI 60
           MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI 60

Query: 61  SGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPD 120
           SGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPD
Sbjct: 61  SGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPD 120

Query: 121 AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180
           AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN
Sbjct: 121 AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180

Query: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL 240
           PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL
Sbjct: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL 240

Query: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300
           YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT
Sbjct: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300

Query: 301 QYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAI 360
           QYINLIQMLATQPGK PHLRLTGVDDPESVHRP+GGLKHIGQRLEQLAKALRVPFEFQAI
Sbjct: 301 QYINLIQMLATQPGKAPHLRLTGVDDPESVHRPVGGLKHIGQRLEQLAKALRVPFEFQAI 360

Query: 361 ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420
           ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV
Sbjct: 361 ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420

Query: 421 EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEG 480
           EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPR+SQDRINVERQCLAKDIVNIVACEG
Sbjct: 421 EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRDSQDRINVERQCLAKDIVNIVACEG 480

Query: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGW 540
           EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGW
Sbjct: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGW 540

Query: 541 EEKSLIITSTWR 553
           EEKSLIITSTWR
Sbjct: 541 EEKSLIITSTWR 552

[Close]

BLAST of Carg27257-RA vs. NCBI nr
Match: XP_022974961.1 (scarecrow-like protein 1 [Cucurbita maxima] >XP_022974966.1 scarecrow-like protein 1 [Cucurbita maxima])

HSP 1 Score: 1065.1 bits (2753), Expect = 8.2e-308
Identity = 539/552 (97.64%), Postives = 542/552 (98.19%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI 60
           MSLVRPSDPSPLSYGSRKLYSL GTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLKGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI 60

Query: 61  SGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPD 120
           SGVSGISNNSFHPNA SYGRTCDSDSACLE TSPEQLDF DDQVRLKLQELERDLLGEPD
Sbjct: 61  SGVSGISNNSFHPNATSYGRTCDSDSACLESTSPEQLDFEDDQVRLKLQELERDLLGEPD 120

Query: 121 AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180
           AADY VEML NGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN
Sbjct: 121 AADYGVEMLVNGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180

Query: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL 240
           PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGK L
Sbjct: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKYL 240

Query: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300
           YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT
Sbjct: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300

Query: 301 QYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAI 360
           QYINLIQMLATQPGKPPHLRLTGVDDPESVHRP+GGLKHIGQRLEQLAKALRVPFEFQAI
Sbjct: 301 QYINLIQMLATQPGKPPHLRLTGVDDPESVHRPVGGLKHIGQRLEQLAKALRVPFEFQAI 360

Query: 361 ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420
           ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV
Sbjct: 361 ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420

Query: 421 EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEG 480
           EQDMNTNTTPFFSRFVETYNYFAAVY+TLDATLPR+SQDRINVERQCLAKDIVNIVACEG
Sbjct: 421 EQDMNTNTTPFFSRFVETYNYFAAVYNTLDATLPRDSQDRINVERQCLAKDIVNIVACEG 480

Query: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGW 540
           EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIR LIGEYCE R KMYEEMGTVHFGW
Sbjct: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRNLIGEYCE-RFKMYEEMGTVHFGW 540

Query: 541 EEKSLIITSTWR 553
           EEKSLIITSTWR
Sbjct: 541 EEKSLIITSTWR 551

[Close]

BLAST of Carg27257-RA vs. NCBI nr
Match: XP_023536272.1 (scarecrow-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023536273.1 scarecrow-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023536274.1 scarecrow-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1062.8 bits (2747), Expect = 4.1e-307
Identity = 541/552 (98.01%), Postives = 544/552 (98.55%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSI 60
           MSLVRPSD SPLSYGSRKLYSLNGTKNAPDLSAQRFGSE HRSESYEKYFLDFPIEELSI
Sbjct: 1   MSLVRPSDLSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEKHRSESYEKYFLDFPIEELSI 60

Query: 61  SGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPD 120
           SGVSGIS NSFHPNAASYGRT DSDSACLE TSPEQLDF DDQVRLKLQELERDLLGEPD
Sbjct: 61  SGVSGISTNSFHPNAASYGRT-DSDSACLESTSPEQLDFEDDQVRLKLQELERDLLGEPD 120

Query: 121 AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180
           AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN
Sbjct: 121 AADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQN 180

Query: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL 240
           PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL
Sbjct: 181 PREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCL 240

Query: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300
           YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT
Sbjct: 241 YKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGT 300

Query: 301 QYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAI 360
           QYINLIQMLATQPGKPPHLRLTGVDDPESVHRP+GGLKHIGQRLEQLAKALRVPFEFQAI
Sbjct: 301 QYINLIQMLATQPGKPPHLRLTGVDDPESVHRPVGGLKHIGQRLEQLAKALRVPFEFQAI 360

Query: 361 ASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420
           ASNTSDVTPSMLAS HGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV
Sbjct: 361 ASNTSDVTPSMLASCHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVV 420

Query: 421 EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEG 480
           EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPR+SQDRINVERQCLAKDIVNI+ACEG
Sbjct: 421 EQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRDSQDRINVERQCLAKDIVNIIACEG 480

Query: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGW 540
           EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCE RLKMYEEMGTVHFGW
Sbjct: 481 EDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCE-RLKMYEEMGTVHFGW 540

Query: 541 EEKSLIITSTWR 553
           EEKSLIITSTWR
Sbjct: 541 EEKSLIITSTWR 550

[Close]

BLAST of Carg27257-RA vs. NCBI nr
Match: XP_004139646.1 (PREDICTED: scarecrow-like protein 1 [Cucumis sativus] >KGN44510.1 hypothetical protein Csa_7G322070 [Cucumis sativus])

HSP 1 Score: 939.1 bits (2426), Expect = 6.8e-270
Identity = 484/574 (84.32%), Postives = 514/574 (89.55%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVRPSDPSPLSYGSRKLYSL GT +APDLS QRFGSE HR         SESYEKYFL
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLKGTNSAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPN--AASYGRTC-----------DSDSACLEITSPEQLD 120
           DFPIEEL+I   SGIS NS HPN  A S    C           +SDSACLE TSPE+LD
Sbjct: 61  DFPIEELAI---SGISTNSCHPNAWADSLSPLCNSFTPFDACQSNSDSACLESTSPEELD 120

Query: 121 FGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESS 180
           F DDQVR KLQELERDLLG+PDAADYDVEML NGQ+MEIDSEWANSI+DALLHDSP ESS
Sbjct: 121 FEDDQVRQKLQELERDLLGDPDAADYDVEMLTNGQSMEIDSEWANSIQDALLHDSPKESS 180

Query: 181 STDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPS 240
           STDSNFST  SNKDASQ+SSQNPR+ML ECAFAISE+N+ EASAMIEQLR +VS+QGDPS
Sbjct: 181 STDSNFSTISSNKDASQLSSQNPRQMLSECAFAISEENYGEASAMIEQLRCVVSIQGDPS 240

Query: 241 QRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300
           QRIAAYMVEGLAARLL SGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA
Sbjct: 241 QRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300

Query: 301 IIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLK 360
           IIEAAKDEK+IHIIDFDVSQGTQYI LIQMLA QPGKPPHLRLTGVDDPESV RP+GGL+
Sbjct: 301 IIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLR 360

Query: 361 HIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVST 420
           HIGQRLEQLAKALRVPFEF+AIASN S+VTPSMLAS+ GEA+IVNFAFLLHHMPDESVST
Sbjct: 361 HIGQRLEQLAKALRVPFEFRAIASNASEVTPSMLASKPGEALIVNFAFLLHHMPDESVST 420

Query: 421 VNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQ 480
           VN RD+LLRMVK+LNPKLVTVVEQDMNTNTTPFFSRFVE YNY+AAVYD+LDATLPR+SQ
Sbjct: 421 VNQRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYDSLDATLPRDSQ 480

Query: 481 DRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKL 540
           DRINVE QCLAKDIVNIVACEGE+RVERYEVAGKWRARMTMAGF+SC+MSQNVTDPIRKL
Sbjct: 481 DRINVESQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSQNVTDPIRKL 540

Query: 541 IGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           I EYC  R KMYEEMGT+HFGWEEKSLI+TS WR
Sbjct: 541 IEEYC-NRFKMYEEMGTLHFGWEEKSLIVTSAWR 570

[Close]

BLAST of Carg27257-RA vs. NCBI nr
Match: XP_022154434.1 (scarecrow-like protein 1 [Momordica charantia] >XP_022154435.1 scarecrow-like protein 1 [Momordica charantia])

HSP 1 Score: 935.3 bits (2416), Expect = 9.8e-269
Identity = 478/579 (82.56%), Postives = 515/579 (88.95%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVRPSDPSPLSYGSRKLYSL GTKNAPDLS Q FGS+ +R         SE+YEKYFL
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLKGTKNAPDLSNQTFGSDKNRTMYMNDSYCSENYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPNAASYGRTCD------------------SDSACLEITS 120
           +FPIEELSI   SGIS NSFHP+AAS+G   D                  S+SACLE TS
Sbjct: 61  NFPIEELSI---SGISTNSFHPDAASFGLRADSLSPLSGSFTIFDAYQSNSESACLESTS 120

Query: 121 PEQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDS 180
           PE LDF DDQVRLKLQELERDLLG+PDAADY+  + ANGQ+MEIDSEWANSI+DALLHDS
Sbjct: 121 PEALDFEDDQVRLKLQELERDLLGDPDAADYEDVIFANGQSMEIDSEWANSIRDALLHDS 180

Query: 181 PNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSV 240
           P ESSSTDSNFST  SNKDASQ+SS NPR+MLLECA AISE N  EASAMIEQLRGMVSV
Sbjct: 181 PKESSSTDSNFSTISSNKDASQISSLNPRQMLLECASAISEQNIGEASAMIEQLRGMVSV 240

Query: 241 QGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFM 300
           QGDPSQRIAAYMVEGLAAR+L SGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFM
Sbjct: 241 QGDPSQRIAAYMVEGLAARILESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFM 300

Query: 301 AANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRP 360
           AANCAIIEAAKDEKRIHI+DFDVSQGTQYI LIQMLATQPGKPPHLRLTGVDDPESV RP
Sbjct: 301 AANCAIIEAAKDEKRIHIVDFDVSQGTQYIKLIQMLATQPGKPPHLRLTGVDDPESVQRP 360

Query: 361 IGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPD 420
           +GGL+HIGQRLEQLAKALRVPFEF+AIASN SDVTPSMLASR GEA+IVNFAFLLHHMPD
Sbjct: 361 VGGLRHIGQRLEQLAKALRVPFEFRAIASNASDVTPSMLASRPGEALIVNFAFLLHHMPD 420

Query: 421 ESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATL 480
           ESVSTVNLRD+LLRMVK+LNPKLVTVVEQDMN NTTPFF+RFVETY Y++A+YD+LDATL
Sbjct: 421 ESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNANTTPFFARFVETYKYYSAIYDSLDATL 480

Query: 481 PRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTD 540
           PR+SQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARM MAGF+SC+MS+NVTD
Sbjct: 481 PRDSQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMMMAGFTSCSMSENVTD 540

Query: 541 PIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           PIRKL+ EYC+ R KMY+EMGT+HFGWEEKSL++TS WR
Sbjct: 541 PIRKLVEEYCD-RFKMYDEMGTIHFGWEEKSLVVTSAWR 575

[Close]

BLAST of Carg27257-RA vs. TAIR10
Match: AT1G21450.1 (SCARECROW-like 1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.5e-157
Identity = 312/589 (52.97%), Postives = 396/589 (67.23%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDL-SAQRFG----------SEMHRSESYEKY 60
           MSLVR ++PS  SY + KLY+LN   N   + SAQ F            + + S+SYEKY
Sbjct: 16  MSLVRSAEPS--SYRNPKLYTLNENGNNNGVSSAQIFDPDRSKNPCLTDDSYPSQSYEKY 75

Query: 61  FLDFPIEEL------SISGVSGISNNSFHPNAASYGRTCDSD-SACLEITSPEQL----- 120
           FLD P +E       S + VS   +    P  +     C  +    L+ TS         
Sbjct: 76  FLDSPTDEFVQHPIGSGASVSSFGSLDSFPYQSRPVLGCSMEFQLPLDSTSTSSTRLLGD 135

Query: 121 --------------DFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWAN 180
                         +F D+Q+R K+QELER LLG     D D +M+     MEIDSEW+ 
Sbjct: 136 YQAVSYSPSMDVVEEFDDEQMRSKIQELERALLG-----DEDDKMVGIDNLMEIDSEWSY 195

Query: 181 SIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAM 240
              ++  H                   +  SQ +   P+++L+ CA A+SE   +EA +M
Sbjct: 196 Q-NESEQHXXXXXXXXXXXXXXXXXXKEVVSQAT---PKQILISCARALSEGKLEEALSM 255

Query: 241 IEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFE 300
           + +LR +VS+QGDPSQRIAAYMVEGLAAR+ ASGK +Y+AL+CKEPPS +RLAAMQ+LFE
Sbjct: 256 VNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFE 315

Query: 301 VCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTG 360
           VCPCFKFGF+AAN AI+EA K E+ +HIIDFD++QG QY+ LI+ +A  PGK P LRLTG
Sbjct: 316 VCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTG 375

Query: 361 VDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVN 420
           +DDPESV R IGGL+ IG RLEQLA+   V F+F+A+ S TS V+PS L  + GE +IVN
Sbjct: 376 IDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVN 435

Query: 421 FAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFA 480
           FAF LHHMPDESV+TVN RD+LL MVK+LNPKLVTVVEQD+NTNT+PFF RF+E Y Y++
Sbjct: 436 FAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYS 495

Query: 481 AVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFS 540
           AV+++LD TLPRESQ+R+NVERQCLA+DIVNIVACEGE+R+ERYE AGKWRARM MAGF+
Sbjct: 496 AVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFN 555

Query: 541 SCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
              MS  VT+ I+ LI +    + K+ EEMG +HF WEEKSLI+ S WR
Sbjct: 556 PKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593

[Close]

BLAST of Carg27257-RA vs. TAIR10
Match: AT5G48150.1 (GRAS family transcription factor)

HSP 1 Score: 409.1 bits (1050), Expect = 4.4e-114
Identity = 219/473 (46.30%), Postives = 307/473 (64.90%), Query Frame = 0


Query: 81  TCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSE 140
           T   D  C    + E  DF     + K++E+E  ++G PD+ D                 
Sbjct: 51  TATYDDTCGSCVTDELNDF-----KHKIREIETVMMG-PDSLD----------------- 110

Query: 141 WANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEA 200
                   LL D  +   ST S     G       +S ++ R  L+ CA A+SE++   A
Sbjct: 111 --------LLVDCTDSFDSTASQ-EINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMA 170

Query: 201 SAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKAL-RCKEPPSSDRLAAMQ 260
            +M+E+LR MVSV G+P QR+ AY++EGL A+L +SG  +YKAL RC EP S++ L+ M 
Sbjct: 171 HSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMH 230

Query: 261 ILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHL 320
           IL+EVCP FKFG+M+AN AI EA K+E R+HIIDF + QG+Q++ LIQ  A +PG PP +
Sbjct: 231 ILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRI 290

Query: 321 RLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEA 380
           R+TG+DD  S +   GGL  +G RL +LAK   VPFEF +++ + S+V P  L  R GEA
Sbjct: 291 RITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEA 350

Query: 381 VIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETY 440
           + VNFAF+LHHMPDESVST N RD+LLRMVK+L+PK+VT+VEQ+ NTNT  FF RF+ET 
Sbjct: 351 LAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETM 410

Query: 441 NYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTM 500
           NY+AA+++++D TLPR+ + RINVE+ CLA+D+VNI+ACEG DRVER+E+ GKWR+R  M
Sbjct: 411 NYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGM 470

Query: 501 AGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           AGF+   +S  V   I+ L+  Y + + ++ E  G ++ GW  + L+ +  W+
Sbjct: 471 AGFTPYPLSPLVNSTIKSLLRNYSD-KYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Carg27257-RA vs. TAIR10
Match: AT1G50600.1 (scarecrow-like 5)

HSP 1 Score: 375.2 bits (962), Expect = 7.1e-104
Identity = 184/382 (48.17%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 171 KDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLA 230
           +    +S  + + +L ECA A+   + +    +I QL+ MVSV G+P QR+ AYM+EGL 
Sbjct: 217 RSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLV 276

Query: 231 ARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIH 290
           ARL +SG  +YKALRCK+P   + L  M IL+E CP FKFG+ +AN AI EA K+E  +H
Sbjct: 277 ARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVH 336

Query: 291 IIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKA 350
           IIDF +SQG Q+++LI+ L  +PG PP++R+TG+DDP S     GGL+ +GQRL +LA+ 
Sbjct: 337 IIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEM 396

Query: 351 LRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVK 410
             VPFEF   A   ++V    L  R+GEA+ VNF  +LHHMPDESV+  N RD+LLR+VK
Sbjct: 397 CGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVK 456

Query: 411 NLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAK 470
           +L+P +VT+VEQ+ NTNT PF  RFVET N++ AV++++D  L R+ ++RINVE+ CLA+
Sbjct: 457 HLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAR 516

Query: 471 DIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMY 530
           ++VN++ACEG +R ER+E  GKWR+R  MAGF    +S  V   I+ L+  Y E +  + 
Sbjct: 517 EVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSE-KYTLE 576

Query: 531 EEMGTVHFGWEEKSLIITSTWR 553
           E  G ++ GW+ + LI +  WR
Sbjct: 577 ERDGALYLGWKNQPLITSCAWR 597

[Close]

BLAST of Carg27257-RA vs. TAIR10
Match: AT2G04890.1 (SCARECROW-like 21)

HSP 1 Score: 368.6 bits (945), Expect = 6.6e-102
Identity = 180/369 (48.78%), Postives = 262/369 (71.00%), Query Frame = 0


Query: 184 MLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKA 243
           +L+ CA A+SE+N   A   + +LRGMVS+ G+P QR+ AYM+EGL ARL ASG  +YK+
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 244 LRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYI 303
           L+ +EP S + L+ + +L EVCP FKFG+M+AN AI EA KDE+RIHIIDF + QG+Q+I
Sbjct: 113 LQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWI 172

Query: 304 NLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASN 363
            LIQ  A +PG  P++R+TGV D          L  + +RLE+LAK   VPF F A++  
Sbjct: 173 ALIQAFAARPGGAPNIRITGVGDGSV-------LVTVKKRLEKLAKKFDVPFRFNAVSRP 232

Query: 364 TSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQD 423
           + +V    L  R GEA+ VNFA++LHH+PDESVS  N RD+LLRMVK+L+PK+VT+VEQ+
Sbjct: 233 SCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQE 292

Query: 424 MNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDR 483
            NTNT+PF  RF+ET +Y+ A+++++D  LPR  ++RIN+E+ C+A+D+VNI+ACEG +R
Sbjct: 293 CNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAER 352

Query: 484 VERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEK 543
           +ER+E+ GKW++R +MAGF    +S  ++  IR L+ +Y      + E  G ++ GW ++
Sbjct: 353 IERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDY-SNGYAIEERDGALYLGWMDR 412

Query: 544 SLIITSTWR 553
            L+ +  W+
Sbjct: 413 ILVSSCAWK 413

[Close]

BLAST of Carg27257-RA vs. TAIR10
Match: AT4G17230.1 (SCARECROW-like 13)

HSP 1 Score: 352.1 bits (902), Expect = 6.4e-97
Identity = 170/371 (45.82%), Postives = 249/371 (67.12%), Query Frame = 0


Query: 182 REMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLY 241
           +E+L+E A A+++ +F  A   ++ L  MVSV G P QR+  YM EGL ARL  SG  +Y
Sbjct: 156 KEVLVEAARAVADGDFATAYGFLDVLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIY 215

Query: 242 KALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQ 301
           K+L+C EP   + ++ M +L+E+CP +KF +  AN  I+EA   E R+HIIDF ++QG+Q
Sbjct: 216 KSLKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQ 275

Query: 302 YINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIA 361
           Y+ LIQ LA +PG PP LR+TGVDD +S +   GGL  +G+RL  LA++  VPFEF    
Sbjct: 276 YMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAI 335

Query: 362 SNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVE 421
            +   V    L    G AV+VNF ++LHHMPDESVS  N RD+LL ++K+L+PKLVT+VE
Sbjct: 336 MSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVE 395

Query: 422 QDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGE 481
           Q+ NTNT+PF SRFVET +Y+ A+++++DA  PR+ + RI+ E+ C+A+DIVN++ACE  
Sbjct: 396 QESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEES 455

Query: 482 DRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWE 541
           +RVER+EV G WR RM MAGF+   +S +      +++  Y ++  K+    G ++  W+
Sbjct: 456 ERVERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKAY-DKNYKLGGHEGALYLFWK 515

Query: 542 EKSLIITSTWR 553
            + +   S W+
Sbjct: 516 RRPMATCSVWK 525

[Close]

BLAST of Carg27257-RA vs. Swiss-Prot
Match: sp|Q9SDQ3|SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.0e-155
Identity = 312/589 (52.97%), Postives = 396/589 (67.23%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDL-SAQRFG----------SEMHRSESYEKY 60
           MSLVR ++PS  SY + KLY+LN   N   + SAQ F            + + S+SYEKY
Sbjct: 16  MSLVRSAEPS--SYRNPKLYTLNENGNNNGVSSAQIFDPDRSKNPCLTDDSYPSQSYEKY 75

Query: 61  FLDFPIEEL------SISGVSGISNNSFHPNAASYGRTCDSD-SACLEITSPEQL----- 120
           FLD P +E       S + VS   +    P  +     C  +    L+ TS         
Sbjct: 76  FLDSPTDEFVQHPIGSGASVSSFGSLDSFPYQSRPVLGCSMEFQLPLDSTSTSSTRLLGD 135

Query: 121 --------------DFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWAN 180
                         +F D+Q+R K+QELER LLG     D D +M+     MEIDSEW+ 
Sbjct: 136 YQAVSYSPSMDVVEEFDDEQMRSKIQELERALLG-----DEDDKMVGIDNLMEIDSEWSY 195

Query: 181 SIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAM 240
              ++  H                   +  SQ +   P+++L+ CA A+SE   +EA +M
Sbjct: 196 Q-NESEQHXXXXXXXXXXXXXXXXXXKEVVSQAT---PKQILISCARALSEGKLEEALSM 255

Query: 241 IEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFE 300
           + +LR +VS+QGDPSQRIAAYMVEGLAAR+ ASGK +Y+AL+CKEPPS +RLAAMQ+LFE
Sbjct: 256 VNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFE 315

Query: 301 VCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTG 360
           VCPCFKFGF+AAN AI+EA K E+ +HIIDFD++QG QY+ LI+ +A  PGK P LRLTG
Sbjct: 316 VCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTG 375

Query: 361 VDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVN 420
           +DDPESV R IGGL+ IG RLEQLA+   V F+F+A+ S TS V+PS L  + GE +IVN
Sbjct: 376 IDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVN 435

Query: 421 FAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFA 480
           FAF LHHMPDESV+TVN RD+LL MVK+LNPKLVTVVEQD+NTNT+PFF RF+E Y Y++
Sbjct: 436 FAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYS 495

Query: 481 AVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFS 540
           AV+++LD TLPRESQ+R+NVERQCLA+DIVNIVACEGE+R+ERYE AGKWRARM MAGF+
Sbjct: 496 AVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFN 555

Query: 541 SCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
              MS  VT+ I+ LI +    + K+ EEMG +HF WEEKSLI+ S WR
Sbjct: 556 PKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593

[Close]

BLAST of Carg27257-RA vs. Swiss-Prot
Match: sp|Q9LDL7|PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 8.0e-113
Identity = 219/473 (46.30%), Postives = 307/473 (64.90%), Query Frame = 0


Query: 81  TCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSE 140
           T   D  C    + E  DF     + K++E+E  ++G PD+ D                 
Sbjct: 51  TATYDDTCGSCVTDELNDF-----KHKIREIETVMMG-PDSLD----------------- 110

Query: 141 WANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEA 200
                   LL D  +   ST S     G       +S ++ R  L+ CA A+SE++   A
Sbjct: 111 --------LLVDCTDSFDSTASQ-EINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMA 170

Query: 201 SAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKAL-RCKEPPSSDRLAAMQ 260
            +M+E+LR MVSV G+P QR+ AY++EGL A+L +SG  +YKAL RC EP S++ L+ M 
Sbjct: 171 HSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMH 230

Query: 261 ILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHL 320
           IL+EVCP FKFG+M+AN AI EA K+E R+HIIDF + QG+Q++ LIQ  A +PG PP +
Sbjct: 231 ILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRI 290

Query: 321 RLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEA 380
           R+TG+DD  S +   GGL  +G RL +LAK   VPFEF +++ + S+V P  L  R GEA
Sbjct: 291 RITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEA 350

Query: 381 VIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETY 440
           + VNFAF+LHHMPDESVST N RD+LLRMVK+L+PK+VT+VEQ+ NTNT  FF RF+ET 
Sbjct: 351 LAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETM 410

Query: 441 NYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTM 500
           NY+AA+++++D TLPR+ + RINVE+ CLA+D+VNI+ACEG DRVER+E+ GKWR+R  M
Sbjct: 411 NYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGM 470

Query: 501 AGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           AGF+   +S  V   I+ L+  Y + + ++ E  G ++ GW  + L+ +  W+
Sbjct: 471 AGFTPYPLSPLVNSTIKSLLRNYSD-KYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Carg27257-RA vs. Swiss-Prot
Match: sp|Q8GVE1|CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.2e-110
Identity = 194/372 (52.15%), Postives = 266/372 (71.51%), Query Frame = 0


Query: 180 NPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKC 239
           N +E+L+ CA A+ E N      MI +LR +VSV G+P +R+ AYMVEGL ARL +SG  
Sbjct: 173 NLKELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGIS 232

Query: 240 LYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQG 299
           +YKAL+CKEP SSD L+ M  L+E CP FKFG+M+AN AI EA K E RIHIIDF +SQG
Sbjct: 233 IYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQG 292

Query: 300 TQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQA 359
            Q+I+L+Q LA +PG PP +R+TG+DD  S +   GGL+ +G+RL  +A   +VPFEF  
Sbjct: 293 AQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHP 352

Query: 360 IASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTV 419
           +A + S V  + L    GEA+ VNF   LHH+PDESVST N RD+LLRMVK+L+PK++T+
Sbjct: 353 LAISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTL 412

Query: 420 VEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACE 479
           VE + NTNT PF  RF ET +Y+ A+++++D TLPR+ ++RIN+E+ CLA++IVN++ACE
Sbjct: 413 VEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACE 472

Query: 480 GEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFG 539
           GE+R ERYE  GKW+AR+TMAGF    +S  V   IR L+  Y +   K+ E  G ++ G
Sbjct: 473 GEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSD-NYKLAERDGALYLG 532

Query: 540 WEEKSLIITSTW 552
           W+ + L+++S W
Sbjct: 533 WKSRPLVVSSAW 543

[Close]

BLAST of Carg27257-RA vs. Swiss-Prot
Match: sp|Q69VG1|CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.6e-105
Identity = 184/370 (49.73%), Postives = 263/370 (71.08%), Query Frame = 0


Query: 182 REMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLY 241
           +++L  CA A+SED  +E   ++++ RG+VS+ G+P QR+ AY++EGL AR   SG  +Y
Sbjct: 202 KQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIY 261

Query: 242 KALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQ 301
           +AL+C+EP S + L+ M+IL+ +CP FKFG+MAAN AI EA + E  IHIIDF ++QGTQ
Sbjct: 262 RALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQ 321

Query: 302 YINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIA 361
           +I LIQ LA +PG PP +R+TG+DDP S +    GL  +G+ L+ +++  ++P EF  ++
Sbjct: 322 WITLIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLS 381

Query: 362 SNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVE 421
              + VT  ML  R GEA+ VNF   LHH PDESV   N RD LLRMVK L+PK+ T+VE
Sbjct: 382 VYATQVTKEMLEIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVE 441

Query: 422 QDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGE 481
           Q+ +TNTTPF  RF ET  Y++A+++++DA LPR++++RI+VE+ CLAKDIVNI+ACEG+
Sbjct: 442 QESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGK 501

Query: 482 DRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWE 541
           DRVER+E+ GKW++R+TMAGF    +S  V   IRKL+  Y + +  + E+ G +  GW 
Sbjct: 502 DRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSD-KYTLDEKDGAMLLGWR 561

Query: 542 EKSLIITSTW 552
            + LI  S W
Sbjct: 562 SRKLISASAW 570

[Close]

BLAST of Carg27257-RA vs. Swiss-Prot
Match: sp|Q8H125|SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.3e-102
Identity = 184/382 (48.17%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 171 KDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLA 230
           +    +S  + + +L ECA A+   + +    +I QL+ MVSV G+P QR+ AYM+EGL 
Sbjct: 217 RSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLV 276

Query: 231 ARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIH 290
           ARL +SG  +YKALRCK+P   + L  M IL+E CP FKFG+ +AN AI EA K+E  +H
Sbjct: 277 ARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVH 336

Query: 291 IIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKA 350
           IIDF +SQG Q+++LI+ L  +PG PP++R+TG+DDP S     GGL+ +GQRL +LA+ 
Sbjct: 337 IIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEM 396

Query: 351 LRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVK 410
             VPFEF   A   ++V    L  R+GEA+ VNF  +LHHMPDESV+  N RD+LLR+VK
Sbjct: 397 CGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVK 456

Query: 411 NLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAK 470
           +L+P +VT+VEQ+ NTNT PF  RFVET N++ AV++++D  L R+ ++RINVE+ CLA+
Sbjct: 457 HLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAR 516

Query: 471 DIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMY 530
           ++VN++ACEG +R ER+E  GKWR+R  MAGF    +S  V   I+ L+  Y E +  + 
Sbjct: 517 EVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSE-KYTLE 576

Query: 531 EEMGTVHFGWEEKSLIITSTWR 553
           E  G ++ GW+ + LI +  WR
Sbjct: 577 ERDGALYLGWKNQPLITSCAWR 597

[Close]

BLAST of Carg27257-RA vs. TrEMBL
Match: tr|A0A0A0K4D5|A0A0A0K4D5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G322070 PE=3 SV=1)

HSP 1 Score: 939.1 bits (2426), Expect = 4.5e-270
Identity = 484/574 (84.32%), Postives = 514/574 (89.55%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVRPSDPSPLSYGSRKLYSL GT +APDLS QRFGSE HR         SESYEKYFL
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLKGTNSAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPN--AASYGRTC-----------DSDSACLEITSPEQLD 120
           DFPIEEL+I   SGIS NS HPN  A S    C           +SDSACLE TSPE+LD
Sbjct: 61  DFPIEELAI---SGISTNSCHPNAWADSLSPLCNSFTPFDACQSNSDSACLESTSPEELD 120

Query: 121 FGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESS 180
           F DDQVR KLQELERDLLG+PDAADYDVEML NGQ+MEIDSEWANSI+DALLHDSP ESS
Sbjct: 121 FEDDQVRQKLQELERDLLGDPDAADYDVEMLTNGQSMEIDSEWANSIQDALLHDSPKESS 180

Query: 181 STDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPS 240
           STDSNFST  SNKDASQ+SSQNPR+ML ECAFAISE+N+ EASAMIEQLR +VS+QGDPS
Sbjct: 181 STDSNFSTISSNKDASQLSSQNPRQMLSECAFAISEENYGEASAMIEQLRCVVSIQGDPS 240

Query: 241 QRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300
           QRIAAYMVEGLAARLL SGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA
Sbjct: 241 QRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300

Query: 301 IIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLK 360
           IIEAAKDEK+IHIIDFDVSQGTQYI LIQMLA QPGKPPHLRLTGVDDPESV RP+GGL+
Sbjct: 301 IIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLR 360

Query: 361 HIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVST 420
           HIGQRLEQLAKALRVPFEF+AIASN S+VTPSMLAS+ GEA+IVNFAFLLHHMPDESVST
Sbjct: 361 HIGQRLEQLAKALRVPFEFRAIASNASEVTPSMLASKPGEALIVNFAFLLHHMPDESVST 420

Query: 421 VNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQ 480
           VN RD+LLRMVK+LNPKLVTVVEQDMNTNTTPFFSRFVE YNY+AAVYD+LDATLPR+SQ
Sbjct: 421 VNQRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYDSLDATLPRDSQ 480

Query: 481 DRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKL 540
           DRINVE QCLAKDIVNIVACEGE+RVERYEVAGKWRARMTMAGF+SC+MSQNVTDPIRKL
Sbjct: 481 DRINVESQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSQNVTDPIRKL 540

Query: 541 IGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           I EYC  R KMYEEMGT+HFGWEEKSLI+TS WR
Sbjct: 541 IEEYC-NRFKMYEEMGTLHFGWEEKSLIVTSAWR 570

[Close]

BLAST of Carg27257-RA vs. TrEMBL
Match: tr|A0A1S3CF89|A0A1S3CF89_CUCME (scarecrow-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103500072 PE=3 SV=1)

HSP 1 Score: 932.2 bits (2408), Expect = 5.5e-268
Identity = 480/574 (83.62%), Postives = 512/574 (89.20%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVRPSDPSPLSYGSRKLYSL GT +APDLS QRFGSE HR         SESYEKYFL
Sbjct: 1   MSLVRPSDPSPLSYGSRKLYSLKGTSSAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPNA--ASYGRTCD-----------SDSACLEITSPEQLD 120
           DFPIEEL+I   SGIS NS HPNA   S    C+           SDSACLE TSPE+LD
Sbjct: 61  DFPIEELAI---SGISTNSCHPNAWVDSLSPLCNSFTLFDACQSTSDSACLESTSPEELD 120

Query: 121 FGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESS 180
           F DDQVR KLQELERDLLG+PDAADYDVEML NGQ MEIDSEWANSI+D LLHDSP ESS
Sbjct: 121 FEDDQVRRKLQELERDLLGDPDAADYDVEMLTNGQNMEIDSEWANSIQDTLLHDSPKESS 180

Query: 181 STDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPS 240
           S+DSNFST  SNKDASQ+SSQNPR+MLLECAFAISE+N++EASAMI+QLR +VS+QGDPS
Sbjct: 181 SSDSNFSTISSNKDASQLSSQNPRQMLLECAFAISEENYEEASAMIKQLRCVVSIQGDPS 240

Query: 241 QRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300
           QRIAAYMVEGLAARLL SGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA
Sbjct: 241 QRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCA 300

Query: 301 IIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLK 360
           I+EAAKDEK+IHIIDFDVSQGTQYI LIQM A  PGKPPHLRLTGVDDPESV RPIGGL+
Sbjct: 301 ILEAAKDEKKIHIIDFDVSQGTQYIKLIQMFAALPGKPPHLRLTGVDDPESVQRPIGGLR 360

Query: 361 HIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVST 420
           HIGQRLEQLAKALRVPFEF+AIASN SDVTPSMLAS+ GEA+IVNFAFLLHHMPDESVST
Sbjct: 361 HIGQRLEQLAKALRVPFEFRAIASNASDVTPSMLASKPGEALIVNFAFLLHHMPDESVST 420

Query: 421 VNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQ 480
           VN RD+LLRMVK+LNPKLVTVVEQDMNTNTTPFFSRFVE YNY+AAVYD+LDATLPR+SQ
Sbjct: 421 VNQRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYDSLDATLPRDSQ 480

Query: 481 DRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKL 540
           DRINVE QCLAKDIVNIVACEGE+RVERYEVAGKWRARM MAGF+SC+MSQNVTDPIRKL
Sbjct: 481 DRINVESQCLAKDIVNIVACEGEERVERYEVAGKWRARMMMAGFTSCSMSQNVTDPIRKL 540

Query: 541 IGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           I EYC+ R KMYEEMGT+HFGWEEKSLI+TS WR
Sbjct: 541 IEEYCD-RFKMYEEMGTLHFGWEEKSLIVTSAWR 570

[Close]

BLAST of Carg27257-RA vs. TrEMBL
Match: tr|A0A2N9FGS3|A0A2N9FGS3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13961 PE=3 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 7.0e-207
Identity = 377/578 (65.22%), Postives = 452/578 (78.20%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVR +  S  SY + KLYS+NG+ + P LS Q FGS+ H+         SESYEKYFL
Sbjct: 1   MSLVRSAGLSATSYRNTKLYSINGSDDCPVLSTQIFGSDKHKTTYMTDSYSSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPNAASYGR-----------------TCDSDSACLEITSP 120
           D P EEL     SGIS NSFHP+ +S G                    + +S  LE  SP
Sbjct: 61  DSPTEELIQPSSSGISANSFHPDGSSRGTQNPFDTPWVSMRHRDAYQSNFESDYLESESP 120

Query: 121 EQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSP 180
           +Q+D+ +D++RLKLQELER LL + D      +M   G +MEID EWA+ +++ LLHDSP
Sbjct: 121 DQIDYDEDKMRLKLQELERALLDDND------DMFGTGHSMEIDGEWADPVQNTLLHDSP 180

Query: 181 NESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQ 240
            ESSSTDS  S+  SNK+ SQ+S + PR+MLL+CA A+++ N  EASAMI  LR MVS+Q
Sbjct: 181 KESSSTDSILSSISSNKEVSQVSPRTPRQMLLDCASALADGNIMEASAMINDLRQMVSIQ 240

Query: 241 GDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMA 300
           GDP QRIAAYMVEGLAAR+ +SGKCLYKAL+CKEPPSSDRLAAMQILFEVCPCFKFGFMA
Sbjct: 241 GDPPQRIAAYMVEGLAARMASSGKCLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMA 300

Query: 301 ANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPI 360
           AN A+IEA KDEKR+HI+DFD++QG+QYI LIQ +A + GK PHLRLTG+DDPESV R +
Sbjct: 301 ANGAMIEAFKDEKRVHIVDFDINQGSQYIALIQTVAKRSGKSPHLRLTGIDDPESVQRSV 360

Query: 361 GGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDE 420
           GGLK IGQRLE+LA+ LRVPFEFQA+AS TS V+PSML  R GEA++VNF+FLLHHMPDE
Sbjct: 361 GGLKLIGQRLEKLAEELRVPFEFQAVASKTSIVSPSMLDCRPGEALVVNFSFLLHHMPDE 420

Query: 421 SVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLP 480
           SVSTVN RD+LLRMVK+LNPKLVTVVEQD+NTNT+PF  RFVE YNY++AV+++LDATLP
Sbjct: 421 SVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLP 480

Query: 481 RESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDP 540
           RESQDR NVERQCLA+DIVNIVACEGE+R+ERYEVAGKWRARMTMAGF+SC M   VTD 
Sbjct: 481 RESQDRTNVERQCLARDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMGTKVTDT 540

Query: 541 IRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           I++LI  YC+ + K+ EEMG +HFGWE K+LI+ S WR
Sbjct: 541 IKQLIRNYCD-KYKVKEEMGALHFGWENKNLIVASAWR 571

[Close]

BLAST of Carg27257-RA vs. TrEMBL
Match: tr|A0A1R3JJJ6|A0A1R3JJJ6_COCAP (Transcription factor GRAS OS=Corchorus capsularis OX=210143 GN=CCACVL1_05631 PE=3 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 8.9e-202
Identity = 367/561 (65.42%), Postives = 444/561 (79.14%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVR ++PS  +Y + KLYSL G+ +  DLSAQ FGS+ HR         SESYEKYFL
Sbjct: 1   MSLVRSAEPSTAAYRNTKLYSLQGSSDTSDLSAQMFGSDKHRPVYITDSYSSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQEL 120
           D P EEL     SG+S +S      S  +  D     LEI SP+ LD   DQ++LKLQEL
Sbjct: 61  DSPTEELIHPSSSGMSGSSLRLQDVSSYQLID----YLEIQSPDTLDSDTDQMKLKLQEL 120

Query: 121 ERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNK 180
           ER LL + D  + D +M   G +MEID+EW + ++   LHDSP ESSS+DSN      NK
Sbjct: 121 ERALLADNDVCE-DDDMFGTGLSMEIDNEWCDPVRTESLHDSPKESSSSDSNLXXXXXNK 180

Query: 181 DASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAA 240
           + S +S + P++ML++CA  +SE N +EAS++I +LR MVS+QGDP QRIAAYMVEGLAA
Sbjct: 181 EVSHVSPRTPKQMLIDCAALLSEGNIEEASSIINELRQMVSIQGDPPQRIAAYMVEGLAA 240

Query: 241 RLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHI 300
           R+ ASGK LYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAAN AIIEA KDEKR+HI
Sbjct: 241 RMAASGKYLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKDEKRVHI 300

Query: 301 IDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKAL 360
           IDFD++QG+QYI LIQ +A  PGKPP+LRLTG+DDPESV R  GGL+ +G RLE+LA+AL
Sbjct: 301 IDFDINQGSQYITLIQTIAKLPGKPPYLRLTGIDDPESVQRLNGGLEIVGLRLEKLAEAL 360

Query: 361 RVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKN 420
            VPFEF+A+AS TS V PSML  R GEA+IVNFAF LHHMPDESVST+N RD+LL+MVK+
Sbjct: 361 GVPFEFEAVASRTSLVRPSMLNIRPGEALIVNFAFQLHHMPDESVSTINERDQLLQMVKS 420

Query: 421 LNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKD 480
           LNPKLVTVVEQD+NTNT+PFF RF+E Y+Y++AV+D+LDATLPRESQDR+NVE+QCLA+D
Sbjct: 421 LNPKLVTVVEQDVNTNTSPFFPRFIEAYSYYSAVFDSLDATLPRESQDRMNVEKQCLARD 480

Query: 481 IVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYE 540
           IVNIVACEGE+R+ERYEVAGKWRARMTMAGF++C MS +V D IRKLI EYC+ R K+ E
Sbjct: 481 IVNIVACEGEERIERYEVAGKWRARMTMAGFTACPMSSSVIDMIRKLIKEYCD-RYKLKE 540

Query: 541 EMGTVHFGWEEKSLIITSTWR 553
           ++G +HFGWE+KSLI+ S WR
Sbjct: 541 DLGALHFGWEDKSLIVASAWR 555

[Close]

BLAST of Carg27257-RA vs. TrEMBL
Match: tr|A0A2I4DYW2|A0A2I4DYW2_9ROSI (scarecrow-like protein 1 OS=Juglans regia OX=51240 GN=LOC108984751 PE=3 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 2.6e-201
Identity = 373/577 (64.64%), Postives = 446/577 (77.30%), Query Frame = 0


Query: 1   MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHR---------SESYEKYFL 60
           MSLVR ++ S  SY + KLYSL G+ ++P LSAQ FGS+ H+         SESYEKYFL
Sbjct: 1   MSLVRSAELSSTSYKNPKLYSLKGSDDSPGLSAQIFGSDKHKVTHMTDSYCSESYEKYFL 60

Query: 61  DFPIEELSISGVSGISNNSFHPNAAS------YG------RTCDSDSACLEI----TSPE 120
           D P EEL     SGIS NSF     S      +G      R  D+  +  E+     S +
Sbjct: 61  DSPTEELIQPSSSGISGNSFESRGPSSSTQNPFGTPLVSMRHLDAYRSNFELDYLERSLD 120

Query: 121 QLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPN 180
            +D+ +D +RLKLQELER L       D D +M   G +ME+D EWA+ +++ LLHDSP 
Sbjct: 121 AIDYDEDNMRLKLQELERALFN-----DDDDDMFGTGHSMEVDVEWADPVQNTLLHDSPK 180

Query: 181 ESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQG 240
           ESSSTDSN S+  SNK+ SQ+S + PR+ML++CA A+++ N  EAS MI +LR MVSVQG
Sbjct: 181 ESSSTDSNLSSISSNKEVSQLSPRTPRQMLIDCAGALADGNTMEASVMINELRQMVSVQG 240

Query: 241 DPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAA 300
           DP QRIAAYMVEGLAAR+ ASGKCLYKAL+CKEPPSSDRLAAMQILFEVCPCFKFGFMAA
Sbjct: 241 DPPQRIAAYMVEGLAARMAASGKCLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAA 300

Query: 301 NCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIG 360
           N A+IEA KDEKR+HIIDFD++QG+QY+ LIQ +A + G PP LRLTGVDDPESV R +G
Sbjct: 301 NGAMIEAFKDEKRVHIIDFDINQGSQYMTLIQTIANRAGNPPQLRLTGVDDPESVQRSVG 360

Query: 361 GLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDES 420
           GLK IGQRLE LA+AL VPFEFQA+AS TS VTPSML  R GEA++VNF+F LHHMPDES
Sbjct: 361 GLKIIGQRLENLAEALGVPFEFQALASKTSIVTPSMLDCRPGEALMVNFSFQLHHMPDES 420

Query: 421 VSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPR 480
           VSTVN RD+LLR+VK+LNPKLVTVVEQD+NTNT PFF RF+E YNY++AV+D+LDATLPR
Sbjct: 421 VSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTAPFFPRFIEAYNYYSAVFDSLDATLPR 480

Query: 481 ESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPI 540
           +SQDRINVERQCLA+DIVNIVACEGE+R+ERYEVAGKWRARM MAGF+SC M  N+ D I
Sbjct: 481 DSQDRINVERQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSCPMGPNLIDTI 540

Query: 541 RKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 553
           +K I +YC+ R K+ EEMG +HFGW +KSLI+ S WR
Sbjct: 541 QKQIRQYCD-RYKVKEEMGALHFGWADKSLIVASAWR 571

The following BLAST results are available for this feature:

BLAST of Carg27257-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937118.1	0.0e+00	99.46	scarecrow-like protein 1 [Cucurbita moschata] >XP_022937119.1 scarecrow-like pro...	[more]
XP_022974961.1	8.2e-308	97.64	scarecrow-like protein 1 [Cucurbita maxima] >XP_022974966.1 scarecrow-like prote...	[more]
XP_023536272.1	4.1e-307	98.01	scarecrow-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023536273.1 scarecrow-...	[more]
XP_004139646.1	6.8e-270	84.32	PREDICTED: scarecrow-like protein 1 [Cucumis sativus] >KGN44510.1 hypothetical p...	[more]
XP_022154434.1	9.8e-269	82.56	scarecrow-like protein 1 [Momordica charantia] >XP_022154435.1 scarecrow-like pr...	[more]

BLAST of Carg27257-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21450.1	5.5e-157	52.97	SCARECROW-like 1	[more]
AT5G48150.1	4.4e-114	46.30	GRAS family transcription factor	[more]
AT1G50600.1	7.1e-104	48.17	scarecrow-like 5	[more]
AT2G04890.1	6.6e-102	48.78	SCARECROW-like 21	[more]
AT4G17230.1	6.4e-97	45.82	SCARECROW-like 13	[more]

BLAST of Carg27257-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SDQ3\|SCL1_ARATH	1.0e-155	52.97	Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1	[more]
sp\|Q9LDL7\|PAT1_ARATH	8.0e-113	46.30	Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1...	[more]
sp\|Q8GVE1\|CIGR2_ORYSJ	2.2e-110	52.15	Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonic...	[more]
sp\|Q69VG1\|CIGR1_ORYSJ	1.6e-105	49.73	Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonic...	[more]
sp\|Q8H125\|SCL5_ARATH	1.3e-102	48.17	Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=2 SV=1	[more]

BLAST of Carg27257-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4D5\|A0A0A0K4D5_CUCSA	4.5e-270	84.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G322070 PE=3 SV=1	[more]
tr\|A0A1S3CF89\|A0A1S3CF89_CUCME	5.5e-268	83.62	scarecrow-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103500072 PE=3 SV=1	[more]
tr\|A0A2N9FGS3\|A0A2N9FGS3_FAGSY	7.0e-207	65.22	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13961 PE=3 SV=1	[more]
tr\|A0A1R3JJJ6\|A0A1R3JJJ6_COCAP	8.9e-202	65.42	Transcription factor GRAS OS=Corchorus capsularis OX=210143 GN=CCACVL1_05631 PE=...	[more]
tr\|A0A2I4DYW2\|A0A2I4DYW2_9ROSI	2.6e-201	64.64	scarecrow-like protein 1 OS=Juglans regia OX=51240 GN=LOC108984751 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR030011	Scarecrow-like_1
IPR005202	TF_GRAS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27257	Carg27257	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27257-RA.exon.1	Carg27257-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27257-RA.CDS.1	Carg27257-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27257-RA	Carg27257-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 182..552 e-value: 9.3E-128 score: 426.2
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 172..552 score: 94.366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..178
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 1..552
IPR030011	Scarecrow-like protein 1	PANTHER	PTHR31636:SF10	SCARECROW-LIKE PROTEIN 1	coord: 1..552