Carg27157-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGAGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCGGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACAACAGCATTAACGACGAGAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCACCGATCGAATAACAGATCCCAAAAGAGTAAAAAGGTGAAATTTTTTCATCTGGGTCTTCAAAATTTCATCTGGGTTTCAACAAAATTGAAATTTTTGAAATGGGTTTGTGATTTTTTCTTCGTTTATGGGCTTAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGTACGTTGCAAAAGCTTTGTTATGGTTAAAAATTACTAACAATGGCGGCGGATTATTAACCAAATGTGGCATTGTGAAGGCGGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGGTATGTAAATCGCCGCCCTTAATTATCTCATAATCAAACCATAATCCACCTCCATCAAACACATCAAACTTTCATTTATAAACTCTTTTTTCGGGTTAATTAATAAATTAATTTAAAGGGTCCATCGAGAGATGTCCATAGAGTGTGGAGGAGACGAGACAATAAGCTTTTCCTATTCGTGTCCTCGCCTCCTATTTCAATCTTCCTCGTAGCTAGGATTTCCATTTATTTTGATTAAATCTAAGTATAATCTTTATTTTTCAATATAGTAAAATATTTTAATAAATCGAATAAGATTCGATGAACAGTGATATAATATCTAACATAATTTTTAAAAACTCAAATTTCAATATTACAATCTAGGTTTGCCTTAGTTTGGATATGTTTATGTAAAGTATCTTGGTCGAGATAGAGATTTGGATAGCCTCGAGCCTTCCTTTAGTTAACAAAGAAGAAACTCTCTTCACTCTCTCTCTCATTTCCCGTTAAAACAAATTCTTCTCTTCGTTTGGGTCTGTACCCATGGGACAAATTGATTCCTCTAAATACCACTCTTATCTTATTTCTCTATAAAATTTCAATATTTTTATTGGCTCAAAACATTTTTAATGAGATCAAATCCGTAGTTAAAGTAGTTAAACTAGATTCAAATTAGTCAGACCGAGTTAGTAAGATCTAGCTAAAGTGAACTATAACTGCCCACCCTTAGCATATCTTATCTACTTTAGATTTTTCCTCAAGATTTTAAGACCGTCTATTAAGAAAGATTTCCACACCCTTGTACAGAATGGATGGTAAGATCTCACATCATTTGAAAAAGGGAACAAAGCATTCATCGTAAGGGTGTGAAAATCTCTCTCTAACAGACGCGTTTTAAAATCCGTGAAGCTGACGACTATACGTAACAGGCCAAAACAGACAATATCTCGTAGCAACGAGTTTGAACCGTCGTTCGTTCTTAGAATTTGATAGGAGGGTCTTAGACCTTAAGTTAGACCCACAGAATGGGGACACAATAATTGTCCATTGACTCGAGGGTAGACAGAAAAGAAGAACGTGGCGGGCACTATAAGGAAAGAGGATATAAAATTCCTTGTCTGCCAGCCAATTCTACCACTCCTCTTGCATGCATGATTATAATAAAATTCCAGCCAAAGTTCGAACCTTTTAATGTTTCACCCTTAGTTTCAATCTTTTGCATGCATGCAGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCATCGTCACCACCTCCCACCGCCATCGCCACCGCCACCGTCACCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTCAACATCGTGGTTTAGCGCGCGCACACCCTCCTCAATAACCCATGTGATGTGGTTGGGGCCACTTCAAAAGCCTTCCATGATTGAGTTGCAAAGAAGAACATACATACATGTGCAAGGGGAATTAATTTAATTTTG ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGAGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCGGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACAACAGCATTAACGACGAGAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCACCGATCGAATAACAGATCCCAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCATCGTCACCACCTCCCACCGCCATCGCCACCGCCACCGTCACCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTCAACATCGTGGTTTAGCGCGCGCACACCCTCCTCAATAACCCATGTGATGTGGTTGGGGCCACTTCAAAAGCCTTCCATGATTGAGTTGCAAAGAAGAACATACATACATGTGCAAGGGGAATTAATTTAATTTTG ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGAGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCGGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACAACAGCATTAACGACGAGAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCACCGATCGAATAACAGATCCCAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCATCGTCACCACCTCCCACCGCCATCGCCACCGCCACCGTCACCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTCAACATCGTGGTTTAG MAQLPPKIPNMPPNNWPETFPPTTTLPVTHQNPSWVDEFLDFSSSRRGSHRRSVSDSITFLEMPMPEDDCQGSDAAPTTGSGNEFDRFDDDQFLSMFNDEISAAVAPTLSSSNTSTPSDHNSINDEKDGQQSRNKNESDEVQSQQQSKIQTQSNSPAPAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNDNPPPSSPPPTAIATATVTDAKLPNVDQKGQVLNIVV
BLAST of Carg27157-RA vs. NCBI nr
Match: XP_022930624.1 (basic leucine zipper 61-like [Cucurbita moschata]) HSP 1 Score: 365.9 bits (938), Expect = 1.3e-97 Identity = 292/307 (95.11%), Postives = 293/307 (95.44%), Query Frame = 0
BLAST of Carg27157-RA vs. NCBI nr
Match: XP_023531659.1 (basic leucine zipper 61-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96 Identity = 293/307 (95.44%), Postives = 294/307 (95.77%), Query Frame = 0
BLAST of Carg27157-RA vs. NCBI nr
Match: XP_022988856.1 (basic leucine zipper 61-like [Cucurbita maxima]) HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90 Identity = 275/307 (89.58%), Postives = 277/307 (90.23%), Query Frame = 0
BLAST of Carg27157-RA vs. NCBI nr
Match: XP_004144514.1 (PREDICTED: basic leucine zipper 61 [Cucumis sativus] >KGN43491.1 hypothetical protein Csa_7G041360 [Cucumis sativus]) HSP 1 Score: 289.7 bits (740), Expect = 1.2e-74 Identity = 256/327 (78.29%), Postives = 262/327 (80.12%), Query Frame = 0
BLAST of Carg27157-RA vs. NCBI nr
Match: XP_008455472.1 (PREDICTED: basic leucine zipper 61-like [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71 Identity = 230/328 (70.12%), Postives = 237/328 (72.26%), Query Frame = 0
BLAST of Carg27157-RA vs. TAIR10
Match: AT2G42380.2 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-38 Identity = 131/254 (51.57%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of Carg27157-RA vs. TAIR10
Match: AT3G58120.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 124.8 bits (312), Expect = 9.3e-29 Identity = 134/264 (50.76%), Postives = 144/264 (54.55%), Query Frame = 0
BLAST of Carg27157-RA vs. TAIR10
Match: AT1G43700.1 (VIRE2-interacting protein 1) HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of Carg27157-RA vs. TAIR10
Match: AT1G06070.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Carg27157-RA vs. TAIR10
Match: AT2G31370.3 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of Carg27157-RA vs. Swiss-Prot
Match: sp|F4IN23|BZP34_ARATH (Basic leucine zipper 34 OS=Arabidopsis thaliana OX=3702 GN=BZIP34 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37 Identity = 131/254 (51.57%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of Carg27157-RA vs. Swiss-Prot
Match: sp|Q5JMK6|BZP06_ORYSJ (Basic leucine zipper 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP06 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28 Identity = 126/216 (58.33%), Postives = 141/216 (65.28%), Query Frame = 0
BLAST of Carg27157-RA vs. Swiss-Prot
Match: sp|Q9M2K4|BZP61_ARATH (Basic leucine zipper 61 OS=Arabidopsis thaliana OX=3702 GN=BZIP61 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27 Identity = 134/264 (50.76%), Postives = 144/264 (54.55%), Query Frame = 0
BLAST of Carg27157-RA vs. Swiss-Prot
Match: sp|Q5QNI5|BZP02_ORYSJ (Basic leucine zipper 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP02 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25 Identity = 98/185 (52.97%), Postives = 111/185 (60.00%), Query Frame = 0
BLAST of Carg27157-RA vs. Swiss-Prot
Match: sp|Q6K3R9|BZP19_ORYSJ (Basic leucine zipper 19 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP19 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 118/217 (54.38%), Postives = 133/217 (61.29%), Query Frame = 0
BLAST of Carg27157-RA vs. TrEMBL
Match: tr|A0A0A0K6T0|A0A0A0K6T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041360 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 7.9e-75 Identity = 256/327 (78.29%), Postives = 262/327 (80.12%), Query Frame = 0
BLAST of Carg27157-RA vs. TrEMBL
Match: tr|A0A1S3C1Q0|A0A1S3C1Q0_CUCME (basic leucine zipper 61-like OS=Cucumis melo OX=3656 GN=LOC103495628 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 8.2e-72 Identity = 230/328 (70.12%), Postives = 237/328 (72.26%), Query Frame = 0
BLAST of Carg27157-RA vs. TrEMBL
Match: tr|A0A2N9IKL3|A0A2N9IKL3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51947 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 5.3e-63 Identity = 152/235 (64.68%), Postives = 164/235 (69.79%), Query Frame = 0
BLAST of Carg27157-RA vs. TrEMBL
Match: tr|W9RA57|W9RA57_9ROSA (Transcription factor VIP1 OS=Morus notabilis OX=981085 GN=L484_001449 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56 Identity = 200/342 (58.48%), Postives = 220/342 (64.33%), Query Frame = 0
BLAST of Carg27157-RA vs. TrEMBL
Match: tr|A0A061DW36|A0A061DW36_THECC (Basic-leucine zipper (BZIP) transcription factor family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_003607 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.9e-54 Identity = 137/222 (61.71%), Postives = 154/222 (69.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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