Carg27011-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27011-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	calmodulin-binding protein 60 G-like
Location	Cucurbita_argyrosperma_scaffold_374 : 106348 .. 106805 (+)
Sequence length	370

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATAAGCACCCTCCTTTAAGGGGAGAAGACGAAGTATGGAGATTGAAAGGGATTAGCAAAACTGGTCAATATTACGAGCGCTTATCTTCCGAAGGTATTCGAACCGTGGAAAGCTTTGTGAAGGCTTATAAAAGGGATCCTCGTTATCTAAGAAAGGTAGCCAATAAGACACAAAAAAAAACACTATTTCATTCATAATCATCCTTCATTAGTTCAATATAATTGATTATTTTGTGTCATGCAGTTGTTAGGCGATAGAGTTCCAGACAAGACATGGAAGACAATAGAGTTCCAGGTGATAGAGTTCCACGCTGAAGCCATGAGAGGTGCTGAAGTTGCCGACCAAAACCAGACATTCTTGGACGAACTTGAAGATGATTGTAGTCAAATGTTGTCATGGAACAAGTAGGTACCCAAACCTAAGTGATGCTCATAAATATGAACCAACAAATATG

mRNA sequence

AACAATAAGCACCCTCCTTTAAGGGGAGAAGACGAAGTATGGAGATTGAAAGGGATTAGCAAAACTGGTCAATATTACGAGCGCTTATCTTCCGAAGGTATTCGAACCGTGGAAAGCTTTGTGAAGGCTTATAAAAGGGATCCTCGTTATCTAAGAAAGTTGTTAGGCGATAGAGTTCCAGACAAGACATGGAAGACAATAGAGTTCCAGGTGATAGAGTTCCACGCTGAAGCCATGAGAGGTGCTGAAGTTGCCGACCAAAACCAGACATTCTTGGACGAACTTGAAGATGATTGTAGTCAAATGTTGTCATGGAACAAGTAGGTACCCAAACCTAAGTGATGCTCATAAATATGAACCAACAAATATG

Coding sequence (CDS)

AACAATAAGCACCCTCCTTTAAGGGGAGAAGACGAAGTATGGAGATTGAAAGGGATTAGCAAAACTGGTCAATATTACGAGCGCTTATCTTCCGAAGGTATTCGAACCGTGGAAAGCTTTGTGAAGGCTTATAAAAGGGATCCTCGTTATCTAAGAAAGTTGTTAGGCGATAGAGTTCCAGACAAGACATGGAAGACAATAGAGTTCCAGGTGATAGAGTTCCACGCTGAAGCCATGAGAGGTGCTGAAGTTGCCGACCAAAACCAGACATTCTTGGACGAACTTGAAGATGATTGTAGTCAAATGTTGTCATGGAACAAGTAG

Protein sequence

NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK

Homology

[Close]

BLAST of Carg27011-RA vs. NCBI nr
Match: XP_022961534.1 (calmodulin-binding protein 60 A-like [Cucurbita moschata])

HSP 1 Score: 225.3 bits (573), Expect = 9.7e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP
Sbjct: 256 NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 315

Query: 61  DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK 108
           DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK
Sbjct: 316 DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK 362

[Close]

BLAST of Carg27011-RA vs. NCBI nr
Match: XP_023515653.1 (calmodulin-binding protein 60 C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 4.8e-55
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           NNKHPPL GEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP
Sbjct: 256 NNKHPPLMGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 315

Query: 61  DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK 108
           DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK
Sbjct: 316 DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK 362

[Close]

BLAST of Carg27011-RA vs. NCBI nr
Match: XP_022968746.1 (calmodulin-binding protein 60 G-like [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 98/107 (91.59%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           NNKH  LRGEDEVWRLKGISK GQYY+RLS +GI+TVES VKAYKRDPRYLRKLLGDRVP
Sbjct: 256 NNKHHRLRGEDEVWRLKGISKNGQYYKRLSFKGIQTVESLVKAYKRDPRYLRKLLGDRVP 315

Query: 61  DKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK 108
           DKTWKTIEFQVIEFHAEAM GAEVADQNQTFLDELEDDCSQMLSWNK
Sbjct: 316 DKTWKTIEFQVIEFHAEAMGGAEVADQNQTFLDELEDDCSQMLSWNK 362

[Close]

BLAST of Carg27011-RA vs. NCBI nr
Match: XP_008450560.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH P RGEDEVWRL+GI + G+Y++RL+S GI  VE+FVKAY++D R LRK LG+R+ 
Sbjct: 285 NKKHHPPRGEDEVWRLEGIGRNGEYHKRLTSHGILNVEAFVKAYQKDSRSLRKWLGNRLS 344

Query: 61  DKTWKTIEFQVIEF 75
           +KTWKT+  Q +++
Sbjct: 345 EKTWKTMVKQALQY 358

[Close]

BLAST of Carg27011-RA vs. NCBI nr
Match: XP_008450562.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH P RGEDEVWRL+GI + G+Y++RL+S GI  VE+FVKAY++D R LRK LG+R+ 
Sbjct: 285 NKKHHPPRGEDEVWRLEGIGRNGEYHKRLTSHGILNVEAFVKAYQKDSRSLRKWLGNRLS 344

Query: 61  DKTWKTIEFQVIEF 75
           +KTWKT+  Q +++
Sbjct: 345 EKTWKTMVKQALQY 358

[Close]

BLAST of Carg27011-RA vs. TAIR10
Match: AT4G25800.1 (Calmodulin-binding protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-09
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    DEVWRL+ I K G +++RL++ GI TVE F++   RD   LR +LG  + +K
Sbjct: 237 KHYPPALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNK 296

Query: 63  TW 65
            W
Sbjct: 297 MW 298

[Close]

BLAST of Carg27011-RA vs. TAIR10
Match: AT5G57580.1 (Calmodulin-binding protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-09
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    D+VWRL  I K G ++++L++EGI TVE F++   +D   LR +LG  + +K
Sbjct: 248 KHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTILGSGMSNK 307

Query: 63  TWKTI 68
            W  +
Sbjct: 308 MWDAL 312

[Close]

BLAST of Carg27011-RA vs. TAIR10
Match: AT1G73805.1 (Calmodulin binding protein-like)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-09
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P   EDEVWRL+ I K G ++++LSS  I TV+ F+K    D   LR++LG  + D+
Sbjct: 240 KHHPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQILGPGMSDR 299

Query: 63  TWK 66
            W+
Sbjct: 300 KWE 302

[Close]

BLAST of Carg27011-RA vs. TAIR10
Match: AT2G18750.1 (Calmodulin-binding protein)

HSP 1 Score: 57.4 bits (137), Expect = 6.3e-09
Identity = 24/65 (36.92%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P   +DEVWRL+ I K G ++++L+  GI  V+ F++   +D + LR +LG  + ++
Sbjct: 252 KHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTILGSGMSNR 311

Query: 63  TWKTI 68
            W+T+
Sbjct: 312 MWETL 316

[Close]

BLAST of Carg27011-RA vs. TAIR10
Match: AT2G24300.2 (Calmodulin-binding protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-08
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    DEVWRL  I+K G  +++L    I TVE F++   +DP+ LR LLG  + ++
Sbjct: 243 KHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNLLGSGMSNR 302

Query: 63  TWK-TIE 69
            W+ T+E
Sbjct: 303 MWENTVE 309

[Close]

BLAST of Carg27011-RA vs. Swiss-Prot
Match: sp|Q9FKL6|CB60B_ARATH (Calmodulin-binding protein 60 B OS=Arabidopsis thaliana OX=3702 GN=CBP60B PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    D+VWRL  I K G ++++L++EGI TVE F++   +D   LR +LG  + +K
Sbjct: 248 KHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTILGSGMSNK 307

Query: 63  TWKTI 68
            W  +
Sbjct: 308 MWDAL 312

[Close]

BLAST of Carg27011-RA vs. Swiss-Prot
Match: sp|Q0WVV6|CB60D_ARATH (Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    DEVWRL+ I K G +++RL++ GI TVE F++   RD   LR +LG  + +K
Sbjct: 237 KHYPPALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNK 296

Query: 63  TW 65
            W
Sbjct: 297 MW 298

[Close]

BLAST of Carg27011-RA vs. Swiss-Prot
Match: sp|Q9C9T2|SARD1_ARATH (Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=SARD1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.1e-08
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P   EDEVWRL+ I K G ++++LSS  I TV+ F+K    D   LR++LG  + D+
Sbjct: 240 KHHPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQILGPGMSDR 299

Query: 63  TWK 66
            W+
Sbjct: 300 KWE 302

[Close]

BLAST of Carg27011-RA vs. Swiss-Prot
Match: sp|C0SV51|CB60C_ARATH (Calmodulin-binding protein 60 C OS=Arabidopsis thaliana OX=3702 GN=CBP60C PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 24/65 (36.92%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P   +DEVWRL+ I K G ++++L+  GI  V+ F++   +D + LR +LG  + ++
Sbjct: 252 KHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTILGSGMSNR 311

Query: 63  TWKTI 68
            W+T+
Sbjct: 312 MWETL 316

[Close]

BLAST of Carg27011-RA vs. Swiss-Prot
Match: sp|F4IPM3|CB60E_ARATH (Calmodulin-binding protein 60 E OS=Arabidopsis thaliana OX=3702 GN=CBP60E PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-07
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 3   KHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDK 62
           KH P    DEVWRL  I+K G  +++L    I TVE F++   +DP+ LR LLG  + ++
Sbjct: 243 KHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNLLGSGMSNR 302

Query: 63  TWK-TIE 69
            W+ T+E
Sbjct: 303 MWENTVE 309

[Close]

BLAST of Carg27011-RA vs. TrEMBL
Match: tr|A0A1S3BPG1|A0A1S3BPG1_CUCME (calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-18
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH P RGEDEVWRL+GI + G+Y++RL+S GI  VE+FVKAY++D R LRK LG+R+ 
Sbjct: 284 NKKHHPPRGEDEVWRLEGIGRNGEYHKRLTSHGILNVEAFVKAYQKDSRSLRKWLGNRLS 343

Query: 61  DKTWKTIEFQVIEF 75
           +KTWKT+  Q +++
Sbjct: 344 EKTWKTMVKQALQY 357

[Close]

BLAST of Carg27011-RA vs. TrEMBL
Match: tr|A0A1S3BQH7|A0A1S3BQH7_CUCME (calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-18
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH P RGEDEVWRL+GI + G+Y++RL+S GI  VE+FVKAY++D R LRK LG+R+ 
Sbjct: 285 NKKHHPPRGEDEVWRLEGIGRNGEYHKRLTSHGILNVEAFVKAYQKDSRSLRKWLGNRLS 344

Query: 61  DKTWKTIEFQVIEF 75
           +KTWKT+  Q +++
Sbjct: 345 EKTWKTMVKQALQY 358

[Close]

BLAST of Carg27011-RA vs. TrEMBL
Match: tr|A0A1S3BPI6|A0A1S3BPI6_CUCME (calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-18
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH P RGEDEVWRL+GI + G+Y++RL+S GI  VE+FVKAY++D R LRK LG+R+ 
Sbjct: 285 NKKHHPPRGEDEVWRLEGIGRNGEYHKRLTSHGILNVEAFVKAYQKDSRSLRKWLGNRLS 344

Query: 61  DKTWKTIEFQVIEF 75
           +KTWKT+  Q +++
Sbjct: 345 EKTWKTMVKQALQY 358

[Close]

BLAST of Carg27011-RA vs. TrEMBL
Match: tr|A0A1S4DYB4|A0A1S4DYB4_CUCME (calmodulin-binding protein 60 C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492123 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-17
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH   RGEDEVWRLKGI + G+Y +RL+S GI  VE+FVKAY++D R LRKLLG+R+ 
Sbjct: 227 NKKHHTPRGEDEVWRLKGIGRNGKYQKRLTSRGILNVEAFVKAYQKDSRSLRKLLGNRLS 286

Query: 61  DKTWKTIEFQVIEF 75
           D+ WKT+  Q +++
Sbjct: 287 DRKWKTMVEQALQY 300

[Close]

BLAST of Carg27011-RA vs. TrEMBL
Match: tr|A0A1S3BQ55|A0A1S3BQ55_CUCME (calmodulin-binding protein 60 C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492123 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-17
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1   NNKHPPLRGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVP 60
           N KH   RGEDEVWRLKGI + G+Y +RL+S GI  VE+FVKAY++D R LRKLLG+R+ 
Sbjct: 227 NKKHHTPRGEDEVWRLKGIGRNGKYQKRLTSRGILNVEAFVKAYQKDSRSLRKLLGNRLS 286

Query: 61  DKTWKTIEFQVIEF 75
           D+ WKT+  Q +++
Sbjct: 287 DRKWKTMVEQALQY 300

The following BLAST results are available for this feature:

BLAST of Carg27011-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961534.1	9.7e-56	100.00	calmodulin-binding protein 60 A-like [Cucurbita moschata]	[more]
XP_023515653.1	4.8e-55	99.07	calmodulin-binding protein 60 C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968746.1	1.8e-49	91.59	calmodulin-binding protein 60 G-like [Cucurbita maxima]	[more]
XP_008450560.1	1.4e-17	58.11	PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo]	[more]
XP_008450562.1	1.4e-17	58.11	PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo]	[more]

BLAST of Carg27011-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25800.1	1.7e-09	45.16	Calmodulin-binding protein	[more]
AT5G57580.1	1.7e-09	40.00	Calmodulin-binding protein	[more]
AT1G73805.1	2.8e-09	44.44	Calmodulin binding protein-like	[more]
AT2G18750.1	6.3e-09	36.92	Calmodulin-binding protein	[more]
AT2G24300.2	1.4e-08	41.79	Calmodulin-binding protein	[more]

BLAST of Carg27011-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FKL6\|CB60B_ARATH	3.0e-08	40.00	Calmodulin-binding protein 60 B OS=Arabidopsis thaliana OX=3702 GN=CBP60B PE=2 S...	[more]
sp\|Q0WVV6\|CB60D_ARATH	3.0e-08	45.16	Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 S...	[more]
sp\|Q9C9T2\|SARD1_ARATH	5.1e-08	44.44	Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=SARD1 PE=1 SV=1	[more]
sp\|C0SV51\|CB60C_ARATH	1.1e-07	36.92	Calmodulin-binding protein 60 C OS=Arabidopsis thaliana OX=3702 GN=CBP60C PE=2 S...	[more]
sp\|F4IPM3\|CB60E_ARATH	2.5e-07	41.79	Calmodulin-binding protein 60 E OS=Arabidopsis thaliana OX=3702 GN=CBP60E PE=2 S...	[more]

BLAST of Carg27011-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPG1\|A0A1S3BPG1_CUCME	9.0e-18	58.11	calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BQH7\|A0A1S3BQH7_CUCME	9.0e-18	58.11	calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BPI6\|A0A1S3BPI6_CUCME	9.0e-18	58.11	calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DYB4\|A0A1S4DYB4_CUCME	5.9e-17	58.11	calmodulin-binding protein 60 C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BQ55\|A0A1S3BQ55_CUCME	5.9e-17	58.11	calmodulin-binding protein 60 C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005516	calmodulin binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

Vocabulary: **INTERPRO**
Term	Definition
IPR012416	CBP60

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005516	calmodulin binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27011	Carg27011	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27011-RA.exon.1	Carg27011-RA.exon.1	exon
Carg27011-RA.exon.2	Carg27011-RA.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27011-RA.CDS.1	Carg27011-RA.CDS.1	CDS
Carg27011-RA.CDS.2	Carg27011-RA.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27011-RA.three_prime_UTR.1	Carg27011-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27011-RA	Carg27011-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012416	CALMODULIN-BINDING PROTEIN60	PFAM	PF07887	Calmodulin_bind	coord: 2..67 e-value: 3.5E-18 score: 65.9
None	No IPR available	PANTHER	PTHR31713	FAMILY NOT NAMED	coord: 1..67