Carg26847-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26847-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rapid ALkalinization Factor
Location	Cucurbita_argyrosperma_scaffold_344 : 90541 .. 90897 (+)
Sequence length	357

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCTGCCTCGTTCTCCTCCTCGTCTTTGCGGTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGATGATAATTCTGAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCTATGACTGAAGATAGTCGACGACAACTTTTTCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGAAGATCTGCCTCGTTCTCCTCCTCGTCTTTGCGGTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGATGATAATTCTGAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCTATGACTGAAGATAGTCGACGACAACTTTTTCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGAAGATCTGCCTCGTTCTCCTCCTCGTCTTTGCGGTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGATGATAATTCTGAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCTATGACTGAAGATAGTCGACGACAACTTTTTCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of Carg26847-RA vs. NCBI nr
Match: XP_022927736.1 (rapid alkalinization factor 23-like [Cucurbita moschata])

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-56
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYG 60
           MKI LVLLLVF  VAPLSFAFHEASHSSSLLDDNS+YSFFGGDSSEAMTEDSRRQLFQYG
Sbjct: 4   MKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYG 63

Query: 61  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 64  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 121

[Close]

BLAST of Carg26847-RA vs. NCBI nr
Match: XP_023530159.1 (protein RALF-like 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MKICLVLLLV-FAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQY 60
           MKICLVLLLV FAVVAPLSFAFHE SHSSSLL DNS+YSFFGGDSSEAMTEDSRRQLFQY
Sbjct: 4   MKICLVLLLVFFAVVAPLSFAFHETSHSSSLL-DNSQYSFFGGDSSEAMTEDSRRQLFQY 63

Query: 61  GFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           GF YN EARKR LSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 64  GFAYNAEARKRVLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 121

[Close]

BLAST of Carg26847-RA vs. NCBI nr
Match: XP_022989015.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYG 60
           MKICL LLLVFAVVAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYG
Sbjct: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYG 63

Query: 61  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           F YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 64  FAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 121

[Close]

BLAST of Carg26847-RA vs. NCBI nr
Match: XP_023531888.1 (protein RALF-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.4 bits (542), Expect = 4.2e-52
Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYG 60
           MK+C+ LLLVF VV P SFAFHE SHSSSLLDD S+YSFFGGDSSEAMTED+RRQLFQYG
Sbjct: 18  MKLCIFLLLVFVVVVPFSFAFHETSHSSSLLDDISKYSFFGGDSSEAMTEDTRRQLFQYG 77

Query: 61  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           F YN EARKR LSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 78  FAYNAEARKRVLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 135

[Close]

BLAST of Carg26847-RA vs. NCBI nr
Match: XP_022989011.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 213.0 bits (541), Expect = 5.5e-52
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSS--EAMTEDSRRQLFQ 60
           MKICL LLLVFA+VAPLSFAFHE SH SSL+DDNSEYSFFGG SS  EAMTEDSRRQLF+
Sbjct: 4   MKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFE 63

Query: 61  YGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 64  YGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFTD 123

[Close]

BLAST of Carg26847-RA vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 77.8 bits (190), Expect = 5.0e-15
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 1   MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQ 60
           +KI L+L LL  AVVA  + A    + S       + ++ E  +         +E +RRQ
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYL------MDSETNRRQ 62

Query: 61  LFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 118
           L          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R
Sbjct: 63  L---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYR 109

[Close]

BLAST of Carg26847-RA vs. TAIR10
Match: AT1G28270.1 (ralf-like 4)

HSP 1 Score: 75.1 bits (183), Expect = 3.2e-14
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 1   MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLF 60
           +K+ L+  LL+ A+VA    A +  + S      N +      D  E++  +E +RRQL 
Sbjct: 3   VKMLLIFGLLILAMVAKSVNATYPLTKSCI----NGQGCIGEDDELESLMDSETNRRQLA 62

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 117
           +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 63  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Carg26847-RA vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 28  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 87
           S+ L D  +  + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 88  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 116
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of Carg26847-RA vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 67  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 116
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Carg26847-RA vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 34  NSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYD 93
           +S +S   G  +E + E+   + F         A+K+++SY A+ +N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 94  CKKRRRINPYRRGCAAITGCAR 116
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Carg26847-RA vs. Swiss-Prot
Match: sp|Q6NME6|RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 1   MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQ 60
           +KI L+L LL  AVVA  + A    + S       + ++ E  +         +E +RRQ
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYL------MDSETNRRQ 62

Query: 61  LFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 118
           L          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R
Sbjct: 63  L---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYR 109

[Close]

BLAST of Carg26847-RA vs. Swiss-Prot
Match: sp|Q9FZA0|RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.8e-13
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 1   MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLF 60
           +K+ L+  LL+ A+VA    A +  + S      N +      D  E++  +E +RRQL 
Sbjct: 3   VKMLLIFGLLILAMVAKSVNATYPLTKSCI----NGQGCIGEDDELESLMDSETNRRQLA 62

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 117
           +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 63  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Carg26847-RA vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-11
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 28  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 87
           S+ L D  +  + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 88  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 116
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of Carg26847-RA vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.3e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 67  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC 114
           A K+++SY AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of Carg26847-RA vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.9e-10
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 67  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 116
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Carg26847-RA vs. TrEMBL
Match: tr|A0A0A0KHU4|A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.0e-22
Identity = 65/117 (55.56%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 2   KICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGF 61
           K+CL LLL+  V APL  A  +    S    D  +Y F   +      EDSRR LFQYGF
Sbjct: 5   KLCLFLLLIAVVAAPLCLALSDDWTRS--YADVPDYDFTNSN------EDSRRLLFQYGF 64

Query: 62  VYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
            Y K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFTD
Sbjct: 65  AY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFTD 112

[Close]

BLAST of Carg26847-RA vs. TrEMBL
Match: tr|A0A1S4E1Z3|A0A1S4E1Z3_CUCME (protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22
Identity = 66/121 (54.55%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MKICL-VLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLF 60
           MK+CL +LLLV A  A L  A  + + +      N EY+F+G  +   +   +DSRR LF
Sbjct: 1   MKLCLCLLLLVAAFAATLPVALCDWTRAFG----NPEYAFWGNSAPATINDVDDSRRLLF 60

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 119
           QYGF Y K  + ++L Y AL KNN PC RRG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRRRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of Carg26847-RA vs. TrEMBL
Match: tr|A0A1S3B2H7|A0A1S3B2H7_CUCME (protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20
Identity = 64/119 (53.78%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 1   MKICLVLLLVFAVVAPLSFAFHEA-SHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQY 60
           MK+ L LL++  V APL  AF +  +H+ +       Y F          EDSRR LFQY
Sbjct: 4   MKLGLFLLVIAVVAAPLCLAFSDDWTHAYAA----PNYDF------TTNNEDSRRLLFQY 63

Query: 61  GFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           GF Y K  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARFTD
Sbjct: 64  GFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFTD 111

[Close]

BLAST of Carg26847-RA vs. TrEMBL
Match: tr|A0A0A0KCD7|A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.9e-19
Identity = 61/118 (51.69%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 3   ICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLFQYG 62
           +CL LLLV A+   L  A  + + +      N +Y+F+G      +   +DSRR LFQYG
Sbjct: 5   LCL-LLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLFQYG 64

Query: 63  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 119
           F Y K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 65  FAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Carg26847-RA vs. TrEMBL
Match: tr|M4EMR1|M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.7e-13
Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 49  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 108
           +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 35  SETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCS 94

Query: 109 AITGCARFTD 119
           AIT C RF +
Sbjct: 95  AITHCYRFLE 95

The following BLAST results are available for this feature:

BLAST of Carg26847-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927736.1	2.8e-56	96.61	rapid alkalinization factor 23-like [Cucurbita moschata]	[more]
XP_023530159.1	1.1e-52	94.12	protein RALF-like 19 [Cucurbita pepo subsp. pepo]	[more]
XP_022989015.1	3.2e-52	88.98	protein RALF-like 4 [Cucurbita maxima]	[more]
XP_023531888.1	4.2e-52	88.98	protein RALF-like 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022989011.1	5.5e-52	89.17	protein RALF-like 4 [Cucurbita maxima]	[more]

BLAST of Carg26847-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	5.0e-15	43.44	ralf-like 19	[more]
AT1G28270.1	3.2e-14	42.86	ralf-like 4	[more]
AT3G16570.1	1.8e-12	42.86	rapid alkalinization factor 23	[more]
AT4G15800.1	4.4e-11	53.06	ralf-like 33	[more]
AT3G05490.1	1.3e-10	37.80	ralf-like 22	[more]

BLAST of Carg26847-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NME6\|RLF19_ARATH	9.0e-14	43.44	Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1	[more]
sp\|Q9FZA0\|RLF4_ARATH	5.8e-13	42.86	Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1	[more]
sp\|Q9LUS7\|RLF23_ARATH	3.2e-11	42.86	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
sp\|Q945T0\|RALF_TOBAC	9.3e-11	59.57	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
sp\|Q8L9P8\|RLF33_ARATH	7.9e-10	53.06	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]

BLAST of Carg26847-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHU4\|A0A0A0KHU4_CUCSA	3.0e-22	55.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1	[more]
tr\|A0A1S4E1Z3\|A0A1S4E1Z3_CUCME	8.7e-22	54.55	protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1	[more]
tr\|A0A1S3B2H7\|A0A1S3B2H7_CUCME	1.3e-20	53.78	protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1	[more]
tr\|A0A0A0KCD7\|A0A0A0KCD7_CUCSA	6.9e-19	51.69	F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1	[more]
tr\|M4EMR1\|M4EMR1_BRARP	5.7e-13	57.14	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg26847	Carg26847	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26847-RA.exon.1	Carg26847-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26847-RA.CDS.1	Carg26847-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg26847-RA	Carg26847-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 50..115 e-value: 1.6E-19 score: 70.4
None	No IPR available	PANTHER	PTHR33136:SF16	PROTEIN RALF-LIKE 19-RELATED	coord: 3..117
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 3..117