Carg26479-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26479-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Universal stress protein
Location	Cucurbita_argyrosperma_scaffold_381 : 107125 .. 109502 (+)
Sequence length	1075

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAATTATTGGACATAAATTTGTAATTTCATAGAAATGGGCGGCCTTCTAGAAGCGATCGAAGTCGAAATTTCTTCGGATTAGGCGGCTGCAAAAAGCAATTCAATCCAAAAGATCCATTTCGCCACCAACTCTTCTGATTCCGGCCACCATTTTAAAGCCCTACCCACCACCGATTTCCCATCTCTCCGATCGATTCTCCAACCCCATCGCAAGTTCTTGATCGTCTTGTTTTCTCTCCGATGGATACATTAGAGGAGGAGGAAGAATACAACTGGAGAGAAGTCCGGCTTCCGTCGCTGATCCCGGTAGTGCCGGAGCCAGAGCTAGAGAGAGAGACGGCGGTGAGACGTCGTGGCCGAGACATTCTCGTTGCCGTCGATCATGGTCCCAACAGCAAACACGCTTTCGATTGGGCTTTAATCCATTTCTGCCGCCTTGCCGACACCATCCATCTCGTCCACGCCGTTTCCAGTAACAAATCCTTCAAATCAAATACAAAAAGAAAAAAAAACCCTAATCCAGAAATCCCCATTTCACTGATTCCATTGTTTTGTTTAATTAGATGTGAAGAATGAATTGGTTTATGAGTATAGTCAGGGGCTGATGGAGAAGCTTGCGGTGGAGGCCTTTGAGGTTGCCATGGTGAGTACTCATTGAGTGCTGCTCTGCTGATGTTGGCTGCAATTGAGTACTCATTGGGTTTGTTCTTTTGTTGCTCAGGTGAGGACTGTGGCAAGGATTGTGCAGGGAGATGCTGGGAAGATTATTTGTAAGGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGGTATAATAGATGAACTTTGCTGATTCCTTGGGAGATCAATCATTTAGCTTACTTGATGATTCATGTGTTTTGGTTATGACATTTAATGTTTTGGATGAATGCACTGCAAAAAGACAAAGATCTTGACTAACTTTTGAACCAATTCGAATTAGAAACTCTAGGGTATTTTACTTCGGGGTTAAGAAATCGAGTCTAGATTTGATATGCGGTTTTGTTTATCACTAGCTACGTAAATTTGGATTCATGAAACCCCGGAGTGTATTGTGGTGTAGTAATTGACCTGATATTTAGGGCCAAGTTGTAATAGTTCAAGCCCACCGCTCGTAGATATTGTCCTCTTTGAGCTTTCTCTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGGTTTGTTCCCCTCTCCAGGGGCCCAGTGTTCTTGTTAGCACTCATTCCCCTTTTGTAACTGTCCAAACCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTCTAGGCTTCTTCTCAAGGTTTTAAAACGCGTTTGTTAGGGAGAGGTTTCCATACCCTTATAAAGAATGCTTCGTTCCCCTATCTAACAACATGGGATCTTACAATCCACTCCCTTCAGGGTCCAGCGTCCTCTCAGGTACTCGTTCCCTTTTGTAATAGCACAAGCCCACCGTTAACCGATGTTGTCCTCTTTGGGCTTTCTCTCAAGGTTTTAAAATGCGTTTGTTAGGGAAAGGTTTCCACACTCTTATAAAAAATGCTTCGTTCCTCTCTCCAACCAATGTGAGATCTCACACAAGTTGTTTTGGCGTTCGCTTGTAACGATATTGAGACAAACTTTGAATTTCAAATTAACACATCAAGGTCGAGCAATGAGATGTTGAAGATAAGCTTCATCATCTAGAGAGAAACAACCTCATTACAATCGAAAGTTGGTTGCTACATTCAAGAAAGACGACGAGAATCGCTTCTATATAACATACACAAATCCATGTTCTTCTAATCAAACACAGTTCATATAGAACATCAGGCTTGACATCTAGGAGTCAAAAAACACAGTTCATTTAGAGACATTAAGACAAAGTAGATCTGTTTTGTAATGATTGGAATTGGCTTTGTTTGTTCCTTTTCATTTCCAGCGTTCTGCAGGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTATTATAGTTCCTGGAAAAGGTAACCATAAAGGGGAATTTTGAATCCTTTTGCTTACAGATTAAAGCTTCAAACATCATTTCATTCTGTTTTTTGATTCTGTTTTTGAGTTTGGAATTCTGTTGTTGATTTGTGACAGAAGCTGGAGAAGCATCTGTGATTTGAATGCCAACTTCATCATTTCATTCTAAATCTCTGTGTTCTTTTTTGGTTTTAGCATTAAAGTTTTAGGGTTGTAAGAATATGATTAATGTATCTGTCTATCGTGTTTGTGTTCTTGTTCGTGTTCTTGTTCGTGTTCTTGTTCGTGTTCTTGTTCTTGTTCGTGTTCTTGTTCTTGTTCTT

mRNA sequence

TAATAATTATTGGACATAAATTTGTAATTTCATAGAAATGGGCGGCCTTCTAGAAGCGATCGAAGTCGAAATTTCTTCGGATTAGGCGGCTGCAAAAAGCAATTCAATCCAAAAGATCCATTTCGCCACCAACTCTTCTGATTCCGGCCACCATTTTAAAGCCCTACCCACCACCGATTTCCCATCTCTCCGATCGATTCTCCAACCCCATCGCAAGTTCTTGATCGTCTTGTTTTCTCTCCGATGGATACATTAGAGGAGGAGGAAGAATACAACTGGAGAGAAGTCCGGCTTCCGTCGCTGATCCCGGTAGTGCCGGAGCCAGAGCTAGAGAGAGAGACGGCGGTGAGACGTCGTGGCCGAGACATTCTCGTTGCCGTCGATCATGGTCCCAACAGCAAACACGCTTTCGATTGGGCTTTAATCCATTTCTGCCGCCTTGCCGACACCATCCATCTCGTCCACGCCGTTTCCAATGTGAAGAATGAATTGGTTTATGAGTATAGTCAGGGGCTGATGGAGAAGCTTGCGGTGGAGGCCTTTGAGGTTGCCATGGTGAGGACTGTGGCAAGGATTGTGCAGGGAGATGCTGGGAAGATTATTTGTAAGGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGCGTTCTGCAGGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTATTATAGTTCCTGGAAAAGGTAACCATAAAGGGGAATTTTGAATCCTTTTGCTTACAGATTAAAGCTTCAAACATCATTTCATTCTGTTTTTTGATTCTGTTTTTGAGTTTGGAATTCTGTTGTTGATTTGTGACAGAAGCTGGAGAAGCATCTGTGATTTGAATGCCAACTTCATCATTTCATTCTAAATCTCTGTGTTCTTTTTTGGTTTTAGCATTAAAGTTTTAGGGTTGTAAGAATATGATTAATGTATCTGTCTATCGTGTTTGTGTTCTTGTTCGTGTTCTTGTTCGTGTTCTTGTTCGTGTTCTTGTTCTTGTTCGTGTTCTTGTTCTTGTTCTT

Coding sequence (CDS)

ATGGATACATTAGAGGAGGAGGAAGAATACAACTGGAGAGAAGTCCGGCTTCCGTCGCTGATCCCGGTAGTGCCGGAGCCAGAGCTAGAGAGAGAGACGGCGGTGAGACGTCGTGGCCGAGACATTCTCGTTGCCGTCGATCATGGTCCCAACAGCAAACACGCTTTCGATTGGGCTTTAATCCATTTCTGCCGCCTTGCCGACACCATCCATCTCGTCCACGCCGTTTCCAATGTGAAGAATGAATTGGTTTATGAGTATAGTCAGGGGCTGATGGAGAAGCTTGCGGTGGAGGCCTTTGAGGTTGCCATGGTGAGGACTGTGGCAAGGATTGTGCAGGGAGATGCTGGGAAGATTATTTGTAAGGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGCGTTCTGCAGGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTATTATAGTTCCTGGAAAAGGTAACCATAAAGGGGAATTTTGA

Protein sequence

MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWALIHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKIICKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGKGNHKGEF

Homology

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BLAST of Carg26479-RA vs. NCBI nr
Match: XP_022943557.1 (uncharacterized protein LOC111448293 [Cucurbita moschata])

HSP 1 Score: 337.8 bits (865), Expect = 2.2e-89
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 169

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BLAST of Carg26479-RA vs. NCBI nr
Match: XP_023512225.1 (uncharacterized protein LOC111777016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 6.4e-89
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERET VRRRGRDILVAVDHGPNSKHAFDWAL
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETVVRRRGRDILVAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 169

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BLAST of Carg26479-RA vs. NCBI nr
Match: XP_022986619.1 (uncharacterized protein LOC111484307 [Cucurbita maxima])

HSP 1 Score: 334.7 bits (857), Expect = 1.9e-88
Identity = 166/169 (98.22%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWA+
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAI 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEV+MVRTVARIVQGDAG+II
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVSMVRTVARIVQGDAGRII 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 169

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BLAST of Carg26479-RA vs. NCBI nr
Match: XP_004148842.1 (PREDICTED: uncharacterized protein LOC101210790 [Cucumis sativus] >XP_008460941.1 PREDICTED: uncharacterized protein LOC103499676 [Cucumis melo] >KGN61799.1 hypothetical protein Csa_2G247600 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 7.1e-88
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERETA RRRGRDIL+AVDHGPNSKHAFDWAL
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAERRRGRDILIAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYE+SQGLMEKLAVEAFEVAMVRTVARIVQGDAGK+I
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEFSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKVI 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPV+IVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVVIVPGK 169

[Close]

BLAST of Carg26479-RA vs. NCBI nr
Match: XP_022146303.1 (uncharacterized protein LOC111015542 isoform X1 [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 4.0e-83
Identity = 159/170 (93.53%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 1   MDTL-EEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWA 60
           M+TL E+EEEY+WREVRLPSLIPVVPEPELERETA RRRGRDILVAVDHGPNSKHA DWA
Sbjct: 1   METLMEDEEEYSWREVRLPSLIPVVPEPELERETAERRRGRDILVAVDHGPNSKHALDWA 60

Query: 61  LIHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKI 120
           L+HFCRLADTIHLVHAVSNVKNELVYE SQGLMEKLAVEAFEVAMVRTVARIVQGDAGK+
Sbjct: 61  LVHFCRLADTIHLVHAVSNVKNELVYEASQGLMEKLAVEAFEVAMVRTVARIVQGDAGKV 120

Query: 121 ICKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           +CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSE+VFHNCKSAPVIIVPGK
Sbjct: 121 VCKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEYVFHNCKSAPVIIVPGK 170

[Close]

BLAST of Carg26479-RA vs. TAIR10
Match: AT2G21620.2 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 281.6 bits (719), Expect = 3.4e-76
Identity = 136/175 (77.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           M+ L E+EEY++REV LPSLIPVVPEPELERE+  RRRGRD++VAVDHGPNSKHAFDWAL
Sbjct: 1   MEALPEDEEYSFREVVLPSLIPVVPEPELERESGERRRGRDVIVAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSN------VKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQG 120
           +HFCRLADT+HLVHAVS+      VKN++VYE SQ LMEKLAVEA++VAMV++VAR+V+G
Sbjct: 61  VHFCRLADTLHLVHAVSSSFSLQCVKNDVVYETSQALMEKLAVEAYQVAMVKSVARVVEG 120

Query: 121 DAGKIICKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           DAGK+ICKEAEK+KPAAV++GTRGRSL++SVLQGSVSE+ FHNCKSAPVIIVPGK
Sbjct: 121 DAGKVICKEAEKVKPAAVIVGTRGRSLVRSVLQGSVSEYCFHNCKSAPVIIVPGK 175

[Close]

BLAST of Carg26479-RA vs. TAIR10
Match: AT3G53990.1 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 42/155 (27.10%), Postives = 72/155 (46.45%), Query Frame = 0


Query: 38  RGRDILVAVDHGPNSKHAFDWALIHFCRLADTIHLVHAV----SNVKNELVYEYSQGL-- 97
           + R+I +A+D   +SK+A  WA+ +     DTI+++H +       +N L ++    L  
Sbjct: 3   KDRNIGIAMDFSESSKNALKWAIENLADKGDTIYIIHTLPLSGDESRNSLWFKSGSPLIP 62

Query: 98  ---------MEKLAVEAFEVAM-----------VRTVARIVQGDAGKIICKEAEKLKPAA 157
                    MEK  V+     +           V  V ++  GDA + +    + LK  +
Sbjct: 63  LAEFREPEIMEKYGVKTDIACLDMLDTGSRQKEVHVVTKLYWGDAREKLVDAVKDLKLDS 122

Query: 158 VVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIV 167
           +VMG+RG S +Q ++ GSVS  V  +    PV +V
Sbjct: 123 IVMGSRGLSALQRIIMGSVSSFVIQHA-PCPVTVV 156

[Close]

BLAST of Carg26479-RA vs. TAIR10
Match: AT1G11360.1 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-05
Identity = 43/191 (22.51%), Postives = 79/191 (41.36%), Query Frame = 0


Query: 18  PSLIPVVP-EPELERETAVRRRGRDILVAVDHGPNSKHAFDWALIHFCRLADTIHLVHAV 77
           P+++ V P  P     T      R I +AVD    S +A  WA+ ++ R  D + L+H  
Sbjct: 15  PTVVTVQPSSPRFPISTPTAGAQRKIGIAVDLSDESAYAVQWAVQNYLRSGDAVVLLHV- 74

Query: 78  SNVKNELVYEYSQGLM-------------EKLAVEAFEVAMVRTVARIVQ---------- 137
                 ++Y    G M             ++   + F++   +  + + Q          
Sbjct: 75  --QPTSVLYGADWGAMDLSPQWDPNNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFK 134

Query: 138 ------GDAGKIICKEAEKLKPAAVVMGTRGRSLIQSVLQ---GSVSEHVFHNCKSAPVI 176
                  D  + +C E E+L  + ++MG+RG    +   +   GSVS++  H+C + PV+
Sbjct: 135 IHIVKDHDMKERLCLEVERLGLSTLIMGSRGFGATKRSSKGRLGSVSDYSVHHC-ACPVV 194

[Close]

BLAST of Carg26479-RA vs. TAIR10
Match: AT5G54430.1 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 39/152 (25.66%), Postives = 64/152 (42.11%), Query Frame = 0


Query: 44  VAVDHGPNSKHAFDWALIHFCRLADTIHLVHAVSN------------VKNELVYEYSQGL 103
           VAVD    S  A  WA+ H+ R  D + L+H                +K ++    +Q  
Sbjct: 52  VAVDLSEESSFAVRWAVDHYIRPGDAVVLLHVSPTSVLFGADWGPLPLKTQIEDPNAQPQ 111

Query: 104 MEKLAVEAFEVAMVRTVAR-------------IVQGDAGKIICKEAEKLKPAAVVMGTRG 163
             +   +AF    V  +A+             +   D  + +C E E+L  +AV+MG+RG
Sbjct: 112 PSQEDFDAFTSTKVADLAKPLKELGFPYKIHIVKDHDMRERLCLEIERLGLSAVIMGSRG 171

Query: 164 ----RSLIQSVLQGSVSEHVFHNCKSAPVIIV 167
               +        GSVS++  H+C   PV++V
Sbjct: 172 FGAEKKRGSDGKLGSVSDYCVHHC-VCPVVVV 202

[Close]

BLAST of Carg26479-RA vs. TAIR10
Match: AT4G27320.1 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 39/160 (24.38%), Postives = 61/160 (38.12%), Query Frame = 0


Query: 40  RDILVAVDHGPNSKHAFDWALIHFCRLADTIHLVH------------------------- 99
           R I VAVD    S  A  WA+ H+ R  D + ++H                         
Sbjct: 45  RKIGVAVDLSEESAFAVRWAVDHYIRPGDAVVILHVSPTSVLFGADWGPLPLQTPPPPSA 104

Query: 100 -----AVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKIICKEAEKLKP 159
                A      E    ++   +  LA    E      +  +   D  + +C E E+L  
Sbjct: 105 ATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPHKIHIVKDHDMRERLCLETERLNL 164

Query: 160 AAVVMGTRGRSLIQSVLQ---GSVSEHVFHNCKSAPVIIV 167
           +AV+MG+RG    +       GSVS++  H+C   PV++V
Sbjct: 165 SAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHC-VCPVVVV 203

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BLAST of Carg26479-RA vs. Swiss-Prot
Match: sp|P87132|YFK5_SCHPO (Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC167.05 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.3e-04
Identity = 37/147 (25.17%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 37  RRGRDILVAVDHGPNSKHAFDWALIHFCRLADTIHLVHAV--------------SNVKNE 96
           +R     + +D    S HA +WA+    R  DT+ +V  +               + + E
Sbjct: 428 KRNCTYFLTLDLSSESLHAAEWAVGILLRNGDTLIIVDVIECDDPSARAVKDRMESEQLE 487

Query: 97  LVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKIICKEAEKLKPAAVVMGTRGRSLI 156
            + + ++ +++ L+    EV +   +  I    A  +I +  + ++P+ VVMG+RGRS +
Sbjct: 488 TLEKITKYILKLLSKTVLEVEV--NIEVIHHEKAKHLIIEMIDYIEPSLVVMGSRGRSHL 547

Query: 157 QSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           + VL GS S ++  N  S PV++   K
Sbjct: 548 KGVLLGSFSNYLV-NKSSVPVMVARKK 571

[Close]

BLAST of Carg26479-RA vs. TrEMBL
Match: tr|A0A1S3CET4|A0A1S3CET4_CUCME (uncharacterized protein LOC103499676 OS=Cucumis melo OX=3656 GN=LOC103499676 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.7e-88
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERETA RRRGRDIL+AVDHGPNSKHAFDWAL
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAERRRGRDILIAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYE+SQGLMEKLAVEAFEVAMVRTVARIVQGDAGK+I
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEFSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKVI 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPV+IVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVVIVPGK 169

[Close]

BLAST of Carg26479-RA vs. TrEMBL
Match: tr|A0A0A0LL61|A0A0A0LL61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247600 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.7e-88
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           MDTLEEEEEYNWREVRLPSLIPVVPEPELERETA RRRGRDIL+AVDHGPNSKHAFDWAL
Sbjct: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAERRRGRDILIAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHFCRLADTIHLVHAVSNVKNELVYE+SQGLMEKLAVEAFEVAMVRTVARIVQGDAGK+I
Sbjct: 61  IHFCRLADTIHLVHAVSNVKNELVYEFSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKVI 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPV+IVPGK
Sbjct: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVVIVPGK 169

[Close]

BLAST of Carg26479-RA vs. TrEMBL
Match: tr|A0A2I4HRP2|A0A2I4HRP2_9ROSI (uncharacterized protein LOC109020739 OS=Juglans regia OX=51240 GN=LOC109020739 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.5e-78
Identity = 145/170 (85.29%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MDTL-EEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWA 60
           MDTL E+EEEY+WREV+LPSLIP+VPEPELERE   RRRGRD+L+AVDHGPNSKHAFDWA
Sbjct: 1   MDTLREDEEEYSWREVKLPSLIPIVPEPELEREKGERRRGRDVLIAVDHGPNSKHAFDWA 60

Query: 61  LIHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKI 120
           LIH CRLADT+HL+HAVS+VKNE+VYE SQGLMEKLAVEAFEVA+VRT ARIV+GD GK+
Sbjct: 61  LIHLCRLADTLHLIHAVSSVKNEVVYEISQGLMEKLAVEAFEVALVRTEARIVEGDPGKV 120

Query: 121 ICKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGK 170
           ICKEAE+LKPAAVVMGTRGRS+IQSVLQGSVSE+ FHNCKSAPVIIVPGK
Sbjct: 121 ICKEAERLKPAAVVMGTRGRSIIQSVLQGSVSEYCFHNCKSAPVIIVPGK 170

[Close]

BLAST of Carg26479-RA vs. TrEMBL
Match: tr|A0A2P2JA76|A0A2P2JA76_RHIMU (Uncharacterized protein MANES_11G086500 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.2e-77
Identity = 143/168 (85.12%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           M+ L+EEEEYNWREV+LP+LIPVVPEP LERET  RRRGRDI++AVDHGPNSKHAFDWAL
Sbjct: 1   MEVLQEEEEYNWREVKLPTLIPVVPEPGLERETGERRRGRDIVIAVDHGPNSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IH CRLADT+HLVHAVSNVKNELVYE +QGLME LAVEAF+V MVRTVARIV+GD GK+I
Sbjct: 61  IHLCRLADTVHLVHAVSNVKNELVYETTQGLMEHLAVEAFQVVMVRTVARIVEGDPGKVI 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPG 169
           CKEAE+LKPAAVVMGTRGRSL+QSVLQGSVSE+ FH+CKSAPVIIVPG
Sbjct: 121 CKEAERLKPAAVVMGTRGRSLVQSVLQGSVSEYCFHHCKSAPVIIVPG 168

[Close]

BLAST of Carg26479-RA vs. TrEMBL
Match: tr|A0A0D2R870|A0A0D2R870_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G029500 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-76
Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MDTLEEEEEYNWREVRLPSLIPVVPEPELERETAVRRRGRDILVAVDHGPNSKHAFDWAL 60
           M+T+ E+EEYN+REV LPSLIPVVPEP LERET  RRRGRDIL+A+DHGP SKHAFDWAL
Sbjct: 1   METVMEDEEYNYREVNLPSLIPVVPEPALERETGERRRGRDILIAIDHGPKSKHAFDWAL 60

Query: 61  IHFCRLADTIHLVHAVSNVKNELVYEYSQGLMEKLAVEAFEVAMVRTVARIVQGDAGKII 120
           IHF RLADTIHLVHAVS+V+N++VYE SQ LMEKLAVEAFEVAMVRT ARIV+GDAGK+I
Sbjct: 61  IHFLRLADTIHLVHAVSSVRNDVVYETSQALMEKLAVEAFEVAMVRTQARIVEGDAGKVI 120

Query: 121 CKEAEKLKPAAVVMGTRGRSLIQSVLQGSVSEHVFHNCKSAPVIIVPGKGNHKGE 176
           CKEAE+LKPAAVVMGTRGRSLIQSV QGSVSE+ FHNCKSAPVIIVPGKG +  +
Sbjct: 121 CKEAERLKPAAVVMGTRGRSLIQSVFQGSVSEYCFHNCKSAPVIIVPGKGTNPNQ 175

The following BLAST results are available for this feature:

BLAST of Carg26479-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943557.1	2.2e-89	100.00	uncharacterized protein LOC111448293 [Cucurbita moschata]	[more]
XP_023512225.1	6.4e-89	99.41	uncharacterized protein LOC111777016 [Cucurbita pepo subsp. pepo]	[more]
XP_022986619.1	1.9e-88	98.22	uncharacterized protein LOC111484307 [Cucurbita maxima]	[more]
XP_004148842.1	7.1e-88	97.04	PREDICTED: uncharacterized protein LOC101210790 [Cucumis sativus] >XP_008460941....	[more]
XP_022146303.1	4.0e-83	93.53	uncharacterized protein LOC111015542 isoform X1 [Momordica charantia]	[more]

BLAST of Carg26479-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21620.2	3.4e-76	77.71	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G53990.1	1.0e-08	27.10	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G11360.1	3.1e-05	22.51	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT5G54430.1	2.0e-04	25.66	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT4G27320.1	4.5e-04	24.38	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

BLAST of Carg26479-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P87132\|YFK5_SCHPO	3.3e-04	25.17	Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of Carg26479-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CET4\|A0A1S3CET4_CUCME	4.7e-88	97.04	uncharacterized protein LOC103499676 OS=Cucumis melo OX=3656 GN=LOC103499676 PE=...	[more]
tr\|A0A0A0LL61\|A0A0A0LL61_CUCSA	4.7e-88	97.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247600 PE=4 SV=1	[more]
tr\|A0A2I4HRP2\|A0A2I4HRP2_9ROSI	7.5e-78	85.29	uncharacterized protein LOC109020739 OS=Juglans regia OX=51240 GN=LOC109020739 P...	[more]
tr\|A0A2P2JA76\|A0A2P2JA76_RHIMU	2.2e-77	85.12	Uncharacterized protein MANES_11G086500 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]
tr\|A0A0D2R870\|A0A0D2R870_GOSRA	1.8e-76	82.29	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G029500 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

Vocabulary: **INTERPRO**
Term	Definition
IPR006016	UspA
IPR014729	Rossmann-like_a/b/a_fold
IPR006015	Universal_stress_UspA

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg26479	Carg26479	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg26479-RA	Carg26479-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26479-RA.exon.1	Carg26479-RA.exon.1	exon
Carg26479-RA.exon.2	Carg26479-RA.exon.2	exon
Carg26479-RA.exon.3	Carg26479-RA.exon.3	exon
Carg26479-RA.exon.4	Carg26479-RA.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26479-RA.five_prime_UTR.1	Carg26479-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26479-RA.CDS.1	Carg26479-RA.CDS.1	CDS
Carg26479-RA.CDS.2	Carg26479-RA.CDS.2	CDS
Carg26479-RA.CDS.3	Carg26479-RA.CDS.3	CDS
Carg26479-RA.CDS.4	Carg26479-RA.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26479-RA.three_prime_UTR.1	Carg26479-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006015	Universal stress protein A	PRINTS	PR01438	UNVRSLSTRESS	coord: 126..138 score: 33.23 coord: 144..166 score: 26.26 coord: 39..57 score: 27.16
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 39..168 e-value: 5.9E-25 score: 90.3
IPR006016	UspA	PFAM	PF00582	Usp	coord: 40..167 e-value: 1.4E-19 score: 70.9
None	No IPR available	PANTHER	PTHR31964:SF113	DESSICATION RESPONSIVE PROTEIN	coord: 37..171
None	No IPR available	PANTHER	PTHR31964	FAMILY NOT NAMED	coord: 37..171
None	No IPR available	CDD	cd00293	USP_Like	coord: 42..166 e-value: 7.62765E-25 score: 93.5886
None	No IPR available	SUPERFAMILY	SSF52402	Adenine nucleotide alpha hydrolases-like	coord: 40..169