Carg26360-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26360-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	lysM domain-containing GPI-anchored protein 2
Location	Cucurbita_argyrosperma_scaffold_334 : 51532 .. 57336 (-)
Sequence length	1705

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTCTCCATTCCCCATTTAATTTTCTCTCTCTAAGGTCTATGCCCTTTTACCCACGTTGAAGCTTGACCAGTACCTATTTCCCTCGTTGTCTGCTTCGACTTTTCCCACTCGAAAACCGCGTTTCTCCCAGCTTCAATCCGCCATTAATATCCTACCAGAACCTTGCAACTACGAGGACGAGAAGACGCTAATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTTTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGGAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAACCTGGAAGCTCCGTATCGGCGATTGCCACAATGTTTAATGTATCGGATGCTATCATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGGTTCATTTCATCTCCCTCATTTTATTTCTGAATTTCTCGTCGATTTTAGGTGGAAATTGAAACTGATTACATGATTTCTTATCACTCTGAACAAATTTAGGGCGTAATTGGCTGAGTTCTTCATCCATTTGGCTTTTGTTTTCTGATGATTTCAATTGATAATCCATAATCGTTAATTCTAAGTATGATTTAGGGTTTAAACTGAAAGATTTTTCCATCTGAATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACTGATTTTACTTTTTAGTCCTTTTGCTTCTTGTCTTTTCTCGTATTCTTAAATATTAATAATAAATACATAAATAAATAAATAAATAAAACTCTATTTTAAGTAATTTTCCATAACTTTTTTTAATGTCTATTTAAAAAAGGGGTTTTTTTTTAAAACCCTATTTTTTGTTTTGTAAAATTCTAAAGTGCTTCTATAAATAAAATGGAAATAATAAAAGTTGCTTTTTTGGTTCAATAAAAGTTTTTTTTAGTTCAATAAAAGTTGTTGTTTGTTAATAAATATAAATTATATATATATTTTTTAAAAAATAGATTTAAATTTATGTTCTAATATACTCTTTTTACCTTTTGAGATTTTTTACCCATGTTAAAATGTTGAGAATATATATATATATATATATTAAGGTGCTTAGAAATAAGATTGAAATAATAAAAAAAAAAATTAGTTACCGTTATTTGTTAATAAATATAAATTATATTGAAGCTATTAGGATTTAAATTTATTTCTAATTTACTCTTTTTACCTTTGAGATTTTTTACAAATGTCAAAAGGTTGAGAATTAAAAAAAAAAGAAAAAAAAAAAATATATATATATATAAGGTAAGAGTTTGGCCTAATCTTTATCGATTGAGCAAACAAAGCTGTTATTTTGCGAAGTGTGTGCATTGGTCAACCCATAGACATTTTTGTTTTATTAATGGGTGGTCTGTAGATTCCTTAATGATTTAAGGTTGTATGGTTTGATCCTGATATTAAGGATTTGGTTGTTCTCCTATTCCGTTTGGGAAAATGACTGGACTTGACTTTTGAGTACTAAATTATATTGACGTCTGAGACAATACGCTGTTTGGTAGTTTTATATTAGCAAACACCTTGATGTCACACTGATAGGTTTTGAGATTTTTTTATATGAAAAAATGGAGAGAGAGTGGCTTCCTGACATTGCTGATGTTTTCACACCCTTGGGTTGACTCTTGGAGGGGAGAAAGTCCTCCACTAGAAATGGGTGAAGGGTAGTTTTGGTATTAGTGTTAGTAGAGAGAGAGAGAGAGTGGCTTCCTGATATTGCTGATGCTTTCACACCCATGGGTTGGCTCTTGGAGGCGGGATCCTCGATTTAGAATTGGGTGAAGGGTAGTTTTGGTATTAGTGTTAATAGAGAGAGAGAGAGAGAGGCTTCCTGATACTGCTGATGTTTTGAGAACCTTGGGTTGGCTTTTGGAGGGAGAAATCCTCCATTAGAATTGTGTTGTGTTGTTAGGTTGAATGGCACTGCGTTTTGTATGGGTCACGACCTCATGTATTTATAGATGTCTTTATAGATGTCTGAAGATTACATTCTAAATCATAGATTTGGTAACAAACCATGAAATCATAGATTTGATAACAAACCAGTAAATCATAGATTATCTTACTATATATATTCTACGTGTTTAACAGGGAGAAGGGTAGTTTTGGTATCAGTGTTAGTAGAGAGAGAGAGGAGTGGCTTCCTCATATTGCTGATGTCTTCACCCCCTTGGGTTGGCTCTTGGAGGACTTGGTATTAGTGTTAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGCTTCCTGATATTGCTGATGTCTTCACGCCCTTGGGTTGGCTCTTGGAAGGGAGAAAGTCCTCCATTAGAAGTGGGTGAAGGGTAGTTTTGGTATTTTGTGTTAGTGGGGAGAGAGAGAGAGAGAGAGAGAGATGAACAAAGTCAACTAAAAAAAACCCAAAGATGGTAAAAACAATTTGAAGTCAACTGATCACAGACAGAGTGGAGTGGTGGGGATGGATTTGAATTTTTTTTAGTGGTGGAGGGATTTGGAAATTGTGTTGTTTAATTTACTATATCTTATTCATCCAAGCAACAAAGACATCATTAAAAATAGAGCATTTGCAAGGATGGTGCGCTCTTCTTGTTGGGGCCATAGTGATGAACTCATTGAAAGTATAAGAATGTGTTTGTTGACTTTGATCATATTTCTAGGAATGTCGTTAGAGAGATCGCCATTCTATGATAGAGGACATTTTTACATTTTGTTGTTCCATGTTCGGGTTGGATCATTTAGCATGCTAGTTCGTTGTGTAGTTATGTCAAACTCGTGAGAGGAATAATGACCTTTACGAAGAGATTTGGATTTGATTCGTCGTTACACCACAAAGATTTCCATAAGTAACTTATTCTTTAAACTTCGAACGTTCTCACTACGTCGTCTTTTTTTAGTGGTAATATTTTTTGTTTTCTAATAGCTAACCTAACAATTCTGGACATGTTTGAGAGTGATTTTAGTTTTAGAACGAAGAAAATAAGTGATTTTGAGCATAAATTTCTAATAGCTAACCTAACAATTCTGGACAGGTTTGAGAGTGATTTTAGTTTTAGAACGAAGAAAATAAGTGATTTTGAGCATAAATTTCTAATAGCTAACCTAACAATTCTGGACAGGTTTGAGAGTGATTTTAGTTTTAGAACGAAGAAAATAAGTGATTTTGAGCATAAATCACTCGCAAACATCTCGTCAATGTTCACGTTCATCACACAAACACTATTATTAACTTTCACTCCGTCAATCTAATCCTAGACTGTATTGTCTAAACGACGGAGATTGAAAGATGCTTACGAGCTGACTAGCCGTTCAACGAAGATATGCTTCGTTCGTCAATTCATCATTATCATTCCTGAAGCTCCTTTATTTTTGTTCAACAAATGCCATTATCATGAAAGATAACTGTTCTGAATTCTATCTGCAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAATGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATGTAAGTGTTGCCAATACTGAATAACTTATTATATTGAGAACTTGTTTGCTCTAAGTTGAAGGTAGCTCGAGTTAGTGAGCTTACCTTTTGTTTGGAACCACGACCCTCCACAGTAGTATAATATTGTCCACGTTGAGCATAAGCTCTCGTGGCAGAGATGTATTCCTTATTTATAAACTCATGATGATCCTCCTCTAAATTAGCGAATGTGAGACTTCCTCCGAACAATCCTGAATGCGTTTTTCTGGTTTTTTTTTTTTCAGTCTTGACTGTAAGCCATCACAGCTGAAGCCACCCTCACAGAAATCATCAAATTGGTCGACATGCCCAGCCATGCCATGTGAAGGTAGCAATTTGCTCCTTGGTAACTCAACAGCTTCTGGTTGCAGCACCACTACATGTGCCTATGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGGTGAGCTGCAAACTTAAGTCGTTTAAAAATACAAGGACCAAAACGATATTTTAACCTACTTTTACTACTTTTATTATGGATAGAAAATGCTCACTACTCGAAATCATCGTCTGAGAGCAACATGAAAGCAGTATTAAAAATGTCAAAAGAACACTACATGTGGTTTGTTTTTTAAATAGCTTAGAAGCATTGTTATGTGTTTTGTGGGAAAACACTAGTAGAGTGATTTTAGTCTTGGTGAGAAGCACTTTTGATCCCAGGTTGGTAGGAGAGTAGAACGAAACATTCATTATAAGGGTATAGAAACCTCTCCCTAGCAGATGCGTTTTAAAACCGTGAGGTTGATGGTGATATGTAACGGATCAAAGCTAACAATATCTGCTAGCGGTGGGTTTGGACTGTTAGAAATGGTATCAGAGCCAGTCACCGGATGGTGTGGTAGCAACGCGTTCGTTGGGCCTCTAAGGGAGTGGATTGTGAGATCCACATTGGTTGGAGAGGAGAACAAAACATTCATTATAAGGGTGTGGAAACCTCTCCCTAGCAATACGTTTTAAAATCTTGAGGCTGACAGTGATATATAATGGGCCAAAGCGAACAATATCTGCTAGCGGTGGGCTTGAGTGGTTAGACATCACCCCTAAACACATATTTTAGGCTCCTCATAGGATAACTGATAACTCTATAGAAAACCAAGCCCCTTGCCCCACAATTCTTTGTTTAAACACCTCTCCTTCACTATAATCATCATCCAGAATCTGACTGTATCCTATCATGTATGAGCAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAATGTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAAGAAGTATAATTTCCTTCTTGTATGTTGGCATAGAGAGATAATCATAATAATGTAGGTAGATTCTTGGTGTTCTGTATTTATCATTAAATAGCCATCTTTTAGTTTCCTTTTTTTCTCGTTAAGCATTAATAAATCGAGTCGAAATAAAGCTGTTCATAGCGAGAAATCGTGAGGATGAACTGGATTAGAATCCATAGTTGGCTGTGAATTTGATTATGATTTTGATTTTGATCTGTAATGTGTTGATGAATGTATTGTATTGTGCACTGAGATTGTTGCAGGAATAAGAATGATGATTTTCCCTTGTTTTCATACCTTAGCTTCTGATACAATGACTGAATAATTATCAGTGAACTTGATACCTGTTTCGAAAACGTTCGAGGCTTGGCTGCTCGATTTCGATC

mRNA sequence

TTCTCTCTCCATTCCCCATTTAATTTTCTCTCTCTAAGGTCTATGCCCTTTTACCCACGTTGAAGCTTGACCAGTACCTATTTCCCTCGTTGTCTGCTTCGACTTTTCCCACTCGAAAACCGCGTTTCTCCCAGCTTCAATCCGCCATTAATATCCTACCAGAACCTTGCAACTACGAGGACGAGAAGACGCTAATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTTTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGGAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAACCTGGAAGCTCCGTATCGGCGATTGCCACAATGTTTAATGTATCGGATGCTATCATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAATGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATTCTTGACTGTAAGCCATCACAGCTGAAGCCACCCTCACAGAAATCATCAAATTGGTCGACATGCCCAGCCATGCCATGTGAAGGTAGCAATTTGCTCCTTGGTAACTCAACAGCTTCTGGTTGCAGCACCACTACATGTGCCTATGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAATGTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAAGAAGTATAATTTCCTTCTTGTATGTTGGCATAGAGAGATAATCATAATAATGTAGGTAGATTCTTGGTGTTCTGTATTTATCATTAAATAGCCATCTTTTAGTTTCCTTTTTTTCTCGTTAAGCATTAATAAATCGAGTCGAAATAAAGCTGTTCATAGCGAGAAATCGTGAGGATGAACTGGATTAGAATCCATAGTTGGCTGTGAATTTGATTATGATTTTGATTTTGATCTGTAATGTGTTGATGAATGTATTGTATTGTGCACTGAGATTGTTGCAGGAATAAGAATGATGATTTTCCCTTGTTTTCATACCTTAGCTTCTGATACAATGACTGAATAATTATCAGTGAACTTGATACCTGTTTCGAAAACGTTCGAGGCTTGGCTGCTCGATTTCGATC

Coding sequence (CDS)

ATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTTTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGGAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAACCTGGAAGCTCCGTATCGGCGATTGCCACAATGTTTAATGTATCGGATGCTATCATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAATGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATTCTTGACTGTAAGCCATCACAGCTGAAGCCACCCTCACAGAAATCATCAAATTGGTCGACATGCCCAGCCATGCCATGTGAAGGTAGCAATTTGCTCCTTGGTAACTCAACAGCTTCTGGTTGCAGCACCACTACATGTGCCTATGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAATGTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAA

Protein sequence

MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLLSFGSLLIQ

Homology

[Close]

BLAST of Carg26360-RA vs. NCBI nr
Match: XP_023529739.1 (lysM domain-containing GPI-anchored protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 727.6 bits (1877), Expect = 2.1e-206
Identity = 361/368 (98.10%), Postives = 363/368 (98.64%), Query Frame = 0


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD 60
           MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD
Sbjct: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD 60

Query: 61  VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDK 120
           VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKC NGTGLSDKRPIYKVQSGNTLDK
Sbjct: 61  VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDK 120

Query: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGS 180
           IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVE GS
Sbjct: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGS 180

Query: 181 SVSAIATMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240
           SVSAIAT FNVS+A ILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT
Sbjct: 181 SVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240

Query: 241 YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300
           YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG
Sbjct: 241 YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300

Query: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLL 360
           CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGL +VGLVVFMHLL
Sbjct: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLKLVGLVVFMHLL 360

Query: 361 SFGSLLIQ 369
           SFGSLLIQ
Sbjct: 361 SFGSLLIQ 368

[Close]

BLAST of Carg26360-RA vs. NCBI nr
Match: XP_022928220.1 (lysM domain-containing GPI-anchored protein 2 [Cucurbita moschata])

HSP 1 Score: 720.7 bits (1859), Expect = 2.5e-204
Identity = 356/368 (96.74%), Postives = 361/368 (98.10%), Query Frame = 0


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD 60
           MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKC SLIDYIPPNATTVGDVMKLFD
Sbjct: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCRSLIDYIPPNATTVGDVMKLFD 60

Query: 61  VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDK 120
           VKHLLSFLG+NN PMNTSSSFSLPA QKIKIPFNCKC NG GLSDKRPIYKVQSGNTLDK
Sbjct: 61  VKHLLSFLGSNNLPMNTSSSFSLPAFQKIKIPFNCKCENGIGLSDKRPIYKVQSGNTLDK 120

Query: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGS 180
           IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKV HYGHLVEPGS
Sbjct: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVAHYGHLVEPGS 180

Query: 181 SVSAIATMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240
           SVSAIATMFNVS+A ILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT
Sbjct: 181 SVSAIATMFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240

Query: 241 YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300
           YDYTANNCVLCEC+AAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG
Sbjct: 241 YDYTANNCVLCECEAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300

Query: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLL 360
           CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLN+VGL+VFMHLL
Sbjct: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNLVGLIVFMHLL 360

Query: 361 SFGSLLIQ 369
           SFGSLLIQ
Sbjct: 361 SFGSLLIQ 368

[Close]

BLAST of Carg26360-RA vs. NCBI nr
Match: XP_022989427.1 (lysM domain-containing GPI-anchored protein 2 [Cucurbita maxima])

HSP 1 Score: 710.3 bits (1832), Expect = 3.4e-201
Identity = 353/368 (95.92%), Postives = 357/368 (97.01%), Query Frame = 0


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD 60
           MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKC SLIDYIPPNATTV DVMKLFD
Sbjct: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCRSLIDYIPPNATTVQDVMKLFD 60

Query: 61  VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDK 120
           VKHLLSFLG+NN PMN SSSF+LPA QKIKIPFNCKC NG GLSDKRPIYKVQSGNTLDK
Sbjct: 61  VKHLLSFLGSNNLPMNISSSFALPAFQKIKIPFNCKCENGIGLSDKRPIYKVQSGNTLDK 120

Query: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGS 180
           IAEITFARLVTSLQIAAANGIPDPNKI VGQELWIPLPCSCDDVEGNKVVHYGHLVE GS
Sbjct: 121 IAEITFARLVTSLQIAAANGIPDPNKINVGQELWIPLPCSCDDVEGNKVVHYGHLVESGS 180

Query: 181 SVSAIATMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240
           SVSAIAT FNVS+A ILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT
Sbjct: 181 SVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240

Query: 241 YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300
           YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG
Sbjct: 241 YDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASG 300

Query: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLL 360
           CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLN+VGLVVFMHLL
Sbjct: 301 CSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNLVGLVVFMHLL 360

Query: 361 SFGSLLIQ 369
           SFGSLLIQ
Sbjct: 361 SFGSLLIQ 368

[Close]

BLAST of Carg26360-RA vs. NCBI nr
Match: XP_008447867.1 (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis melo])

HSP 1 Score: 578.9 bits (1491), Expect = 1.2e-161
Identity = 287/361 (79.50%), Postives = 314/361 (86.98%), Query Frame = 0


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  V +AQ PPRFNCSSTSKC SLIDYIPPNATT+  V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATVSLAQTPPRFNCSSTSKCHSLIDYIPPNATTIAAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITF 126
           FLGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE TF
Sbjct: 68  FLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAESTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIA 186
           ARLVT LQI  AN +PDPNKI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAI 
Sbjct: 128 ARLVTFLQIQIANKLPDPNKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVESGSSISAIG 187

Query: 187 TMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
             +NVS+  IL+LNGIAD +DL+ASQVLDIPLKACSS+IRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILRLNGIADPKDLQASQVLDIPLKACSSMIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTC 306
           NCVLC+CDAAKN ILDCKPSQLKP S KSSNWS+CPAM CEGSNLLLGNSTAS C+TTTC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSQLKPSSVKSSNWSSCPAMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 AYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLLSFGSLL 366
           AYAGFSKQTIFTNISTLNTCPGPE    DN N ASRT SQGLN+  LV F H+L+FG LL
Sbjct: 308 AYAGFSKQTIFTNISTLNTCPGPE----DNGNGASRTASQGLNLAYLVAFTHVLAFGLLL 364

Query: 367 I 368
           I
Sbjct: 368 I 364

[Close]

BLAST of Carg26360-RA vs. NCBI nr
Match: XP_004153824.1 (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis sativus] >KGN43327.1 hypothetical protein Csa_7G024010 [Cucumis sativus])

HSP 1 Score: 567.8 bits (1462), Expect = 2.7e-158
Identity = 283/362 (78.18%), Postives = 309/362 (85.36%), Query Frame = 0


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  + +AQ PPRFNCSSTSKC SLIDYI PNATT+G V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATLSLAQTPPRFNCSSTSKCHSLIDYISPNATTIGAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITF 126
            LGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE+TF
Sbjct: 68  LLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAEVTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIA 186
           ARLVT LQI  AN IPDP KI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAIA
Sbjct: 128 ARLVTFLQIQIANEIPDPRKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVEMGSSISAIA 187

Query: 187 TMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
             +NVS+  ILKLNGIAD + L+ASQVLDIPLKACSSVIRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILKLNGIADPKGLQASQVLDIPLKACSSVIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTC 306
           NCVLC+CDAAKN ILDCKPS LKP S KSSNWS+CP M CEGSNLLLGNSTAS C+TTTC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSPLKPSSVKSSNWSSCPTMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 AYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLLSFGSLL 366
           AYAGFSKQTIFTNISTLNTCP    GP DN N ASRTGSQGLN+  LV   H+L+   LL
Sbjct: 308 AYAGFSKQTIFTNISTLNTCP----GPSDNGNGASRTGSQGLNLAYLVAITHVLALSLLL 365

Query: 367 IQ 369
           IQ
Sbjct: 368 IQ 365

[Close]

BLAST of Carg26360-RA vs. TAIR10
Match: AT2G17120.1 (lysm domain GPI-anchored protein 2 precursor)

HSP 1 Score: 279.3 bits (713), Expect = 3.5e-75
Identity = 156/340 (45.88%), Postives = 204/340 (60.00%), Query Frame = 0


Query: 24  AQPPPRFNCS-STSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFS 83
           AQ    FNCS STS C SL+ Y   NATT+ ++  LF VK+L S LGANN P+NTS    
Sbjct: 23  AQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQR 82

Query: 84  LPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIP 143
           +  +Q +++P +C C NGTG+S++   Y ++  + L  +A   F  LVT  +I+  N IP
Sbjct: 83  VNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIP 142

Query: 144 DPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGI 203
           DPNKIE+GQ+ WIPLPCSCD + G  VVHY H+V+ GSS+  IA  F   +  + +LNGI
Sbjct: 143 DPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGI 202

Query: 204 ADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILD 263
                L A + LD+PLKACSS +R+DSLD P LL N +Y +TANNCV C CDA KN  L 
Sbjct: 203 IGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLS 262

Query: 264 CK-PSQLKPPSQKSSNWSTCPAM-PCEGSNLLLGNSTASGCSTTTCAYAGFSKQTIFTNI 323
           C+  S++KP     SNW TCP    C+G+ L      AS      C YAG+S QTIFT  
Sbjct: 263 CQSSSEIKP-----SNWQTCPPFSQCDGALL-----NASCRQPRDCVYAGYSNQTIFTTA 322

Query: 324 STLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLL 361
           S    CP   G     P++ + T S   N V +++   LL
Sbjct: 323 SP--ACPDSAG-----PDNYASTLSSSFNFVIVLIQCALL 345

[Close]

BLAST of Carg26360-RA vs. TAIR10
Match: AT1G21880.2 (lysm domain GPI-anchored protein 1 precursor)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 101/309 (32.69%), Postives = 160/309 (51.78%), Query Frame = 0


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMN--TSSSFSLPASQKI 91
           CSS   C +L+ Y       V +V  LF V   +S L AN   ++     +  LP+   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDP-ISILLANAIDISYPDVENHILPSKLFL 93

Query: 92  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK +  + L  IA+  +  LV++ QI  AN + DP+ ++V
Sbjct: 94  KIPITCSCVDGIRKSVSTH-YKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDV 153

Query: 152 GQELWIPLPCSCDDVEGNKV--VHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARD 211
           G  L IPLPC+C +   N +  V+  ++V+   ++  IA  ++ +   ++ +N +  A D
Sbjct: 154 GTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAMG-APD 213

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQ 271
           + +  +L +PL AC+S   + + DF  ++PNG+Y   A +CV C C A  +  L C+P+ 
Sbjct: 214 VSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSC-ALGSRNLYCEPAS 273

Query: 272 LKPPSQKSSNWSTCPAMPCEGSNLLLGN----STASGCSTTTCAYAGFSKQTIFTNI--S 331
           L           +C +M C  SNL+LGN     T++GC+ TTC Y G +  TI T +  S
Sbjct: 274 LA---------VSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRS 329

[Close]

BLAST of Carg26360-RA vs. TAIR10
Match: AT1G77630.1 (Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-37
Identity = 102/309 (33.01%), Postives = 157/309 (50.81%), Query Frame = 0


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMN--TSSSFSLPASQKI 91
           CSS   C SL+ Y       V +V  LF V   +S L +N+  ++     +  LPA   +
Sbjct: 31  CSSKDTCNSLLGYTLYTDLKVTEVASLFQVDP-VSMLLSNSIDISYPDVENHVLPAKLFL 90

Query: 92  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK ++ +TL  IA+  +  LV+  QI  AN   D + ++V
Sbjct: 91  KIPITCSCVDGIRKS-LSTHYKTRTSDTLGSIADSVYGGLVSPEQIQVANSETDLSVLDV 150

Query: 152 GQELWIPLPCSC--DDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARD 211
           G +L IPLPC+C     E    ++  ++V    +++ IA  F+ S   +  +N +  A D
Sbjct: 151 GTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNVNAMG-APD 210

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQ 271
           +    +L +PL ACSS   + + D+  ++PNG+Y  TA +CV C C      +  C+P+ 
Sbjct: 211 INPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHCVQCSCVLGSRSMY-CEPAS 270

Query: 272 LKPPSQKSSNWSTCPAMPCEGSNLLLGNST----ASGCSTTTCAYAGFSKQTIFT--NIS 331
           +           +C +M C  SN +LGN T    +SGC  TTC+Y GF+  TI T  ++S
Sbjct: 271 IS---------VSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYNGFASGTILTTLSMS 326

[Close]

BLAST of Carg26360-RA vs. TAIR10
Match: AT3G21630.1 (chitin elicitor receptor kinase 1)

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 34/127 (26.77%), Postives = 57/127 (44.88%), Query Frame = 0


Query: 76  NTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQI 135
           N      +    ++ +PF C+C  G  L      Y V+  +T +++A   +A L T   +
Sbjct: 72  NIKDKDRIQMGSRVLVPFPCECQPGDFLGHNFS-YSVRQEDTYERVAISNYANLTTMESL 131

Query: 136 AAANGIPDPNKIEVGQELWIPLPCSCDDVEGNK--VVHYGHLVEPGSSVSAIATMFNVSD 195
            A N  P  N I +   L + + CSC D   +K   +   + + P  S+S+IA    VS 
Sbjct: 132 QARNPFPATN-IPLSATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSA 191

Query: 196 AIILKLN 201
            I+ + N
Sbjct: 192 DILQRYN 196

[Close]

BLAST of Carg26360-RA vs. Swiss-Prot
Match: sp|O23006|LYM2_ARATH (LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana OX=3702 GN=LYM2 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.4e-74
Identity = 156/340 (45.88%), Postives = 204/340 (60.00%), Query Frame = 0


Query: 24  AQPPPRFNCS-STSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFS 83
           AQ    FNCS STS C SL+ Y   NATT+ ++  LF VK+L S LGANN P+NTS    
Sbjct: 23  AQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQR 82

Query: 84  LPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIP 143
           +  +Q +++P +C C NGTG+S++   Y ++  + L  +A   F  LVT  +I+  N IP
Sbjct: 83  VNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIP 142

Query: 144 DPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGI 203
           DPNKIE+GQ+ WIPLPCSCD + G  VVHY H+V+ GSS+  IA  F   +  + +LNGI
Sbjct: 143 DPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGI 202

Query: 204 ADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILD 263
                L A + LD+PLKACSS +R+DSLD P LL N +Y +TANNCV C CDA KN  L 
Sbjct: 203 IGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLS 262

Query: 264 CK-PSQLKPPSQKSSNWSTCPAM-PCEGSNLLLGNSTASGCSTTTCAYAGFSKQTIFTNI 323
           C+  S++KP     SNW TCP    C+G+ L      AS      C YAG+S QTIFT  
Sbjct: 263 CQSSSEIKP-----SNWQTCPPFSQCDGALL-----NASCRQPRDCVYAGYSNQTIFTTA 322

Query: 324 STLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLL 361
           S    CP   G     P++ + T S   N V +++   LL
Sbjct: 323 SP--ACPDSAG-----PDNYASTLSSSFNFVIVLIQCALL 345

[Close]

BLAST of Carg26360-RA vs. Swiss-Prot
Match: sp|Q8H8C7|CEBIP_ORYSJ (Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica OX=39947 GN=CEBIP PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.1e-60
Identity = 132/309 (42.72%), Postives = 173/309 (55.99%), Query Frame = 0


Query: 30  FNC--SSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQ 89
           F C  +S + C S I Y  PNATT G+++  F+   L   LGAN  P  T SS  + A+ 
Sbjct: 31  FTCAVASGTTCKSAILYTSPNATTYGNLVARFNTTTLPDLLGANGLPDGTLSSAPVAANS 90

Query: 90  KIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKI 149
            +KIPF C+C    G SD+ PIY VQ  + LD IA   F   VT  +IAAAN IPDPNKI
Sbjct: 91  TVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIAAANNIPDPNKI 150

Query: 150 EVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARD 209
            V Q LWIPLPCSCD  EG+ V+H  + V  G + SAIA  + V+++ +L  N I D   
Sbjct: 151 NVSQTLWIPLPCSCDKEEGSNVMHLAYSVGKGENTSAIAAKYGVTESTLLTRNKIDDPTK 210

Query: 210 LKASQVLDIPLKACSSVIRQDSLDFP-FLLPNGTYDYTANNCVLCECDAAKNMILDCKPS 269
           L+  Q+LD+PL  C S I   S D    LLP+GTY +TA NC+ C C +     L+C   
Sbjct: 211 LQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCSSTTYQ-LNCTAV 270

Query: 270 QLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTCAYAGFSKQT---IFTNISTL 329
           Q K           CP++P     L LG +  +GC +TTCAY+G+S  +   I T+++T 
Sbjct: 271 QNK----------GCPSVPLCNGTLKLGETNGTGCGSTTCAYSGYSNSSSLIIQTSLATN 328

Query: 330 NTCPGPEGG 333
            T     GG
Sbjct: 331 QTTACQRGG 328

[Close]

BLAST of Carg26360-RA vs. Swiss-Prot
Match: sp|Q93ZH0|LYM1_ARATH (LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana OX=3702 GN=LYM1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-36
Identity = 101/309 (32.69%), Postives = 160/309 (51.78%), Query Frame = 0


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMN--TSSSFSLPASQKI 91
           CSS   C +L+ Y       V +V  LF V   +S L AN   ++     +  LP+   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDP-ISILLANAIDISYPDVENHILPSKLFL 93

Query: 92  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK +  + L  IA+  +  LV++ QI  AN + DP+ ++V
Sbjct: 94  KIPITCSCVDGIRKSVSTH-YKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDV 153

Query: 152 GQELWIPLPCSCDDVEGNKV--VHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARD 211
           G  L IPLPC+C +   N +  V+  ++V+   ++  IA  ++ +   ++ +N +  A D
Sbjct: 154 GTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAMG-APD 213

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQ 271
           + +  +L +PL AC+S   + + DF  ++PNG+Y   A +CV C C A  +  L C+P+ 
Sbjct: 214 VSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSC-ALGSRNLYCEPAS 273

Query: 272 LKPPSQKSSNWSTCPAMPCEGSNLLLGN----STASGCSTTTCAYAGFSKQTIFTNI--S 331
           L           +C +M C  SNL+LGN     T++GC+ TTC Y G +  TI T +  S
Sbjct: 274 LA---------VSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRS 329

[Close]

BLAST of Carg26360-RA vs. Swiss-Prot
Match: sp|Q6NPN4|LYM3_ARATH (LysM domain-containing GPI-anchored protein 3 OS=Arabidopsis thaliana OX=3702 GN=LYM3 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-35
Identity = 102/309 (33.01%), Postives = 157/309 (50.81%), Query Frame = 0


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMN--TSSSFSLPASQKI 91
           CSS   C SL+ Y       V +V  LF V   +S L +N+  ++     +  LPA   +
Sbjct: 31  CSSKDTCNSLLGYTLYTDLKVTEVASLFQVDP-VSMLLSNSIDISYPDVENHVLPAKLFL 90

Query: 92  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK ++ +TL  IA+  +  LV+  QI  AN   D + ++V
Sbjct: 91  KIPITCSCVDGIRKS-LSTHYKTRTSDTLGSIADSVYGGLVSPEQIQVANSETDLSVLDV 150

Query: 152 GQELWIPLPCSC--DDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARD 211
           G +L IPLPC+C     E    ++  ++V    +++ IA  F+ S   +  +N +  A D
Sbjct: 151 GTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNVNAMG-APD 210

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQ 271
           +    +L +PL ACSS   + + D+  ++PNG+Y  TA +CV C C      +  C+P+ 
Sbjct: 211 INPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHCVQCSCVLGSRSMY-CEPAS 270

Query: 272 LKPPSQKSSNWSTCPAMPCEGSNLLLGNST----ASGCSTTTCAYAGFSKQTIFT--NIS 331
           +           +C +M C  SN +LGN T    +SGC  TTC+Y GF+  TI T  ++S
Sbjct: 271 IS---------VSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYNGFASGTILTTLSMS 326

[Close]

BLAST of Carg26360-RA vs. Swiss-Prot
Match: sp|Q69T51|LYP6_ORYSJ (LysM domain-containing GPI-anchored protein LYP6 OS=Oryza sativa subsp. japonica OX=39947 GN=LYP6 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.8e-34
Identity = 101/315 (32.06%), Postives = 162/315 (51.43%), Query Frame = 0


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLF--DVKHLLSFLGANNFPMNTSSSFSLPASQKI 91
           C+    C +L+ Y       V +V  LF  D + +L+   A +F    +++  LPA   +
Sbjct: 34  CAGADTCAALLGYTLYADMKVSEVAALFGADPRAVLA-ANALDFASPGAANRILPAGLPL 93

Query: 92  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGI--PDPN-K 151
           ++P  C C +G   S     Y  +  +TL  +A++ FA L ++ QI  ANG+   DP+  
Sbjct: 94  RVPTRCACSDGVRKS-VAVRYSARPADTLASVADVVFAGLASADQIRTANGLSAEDPDAP 153

Query: 152 IEVGQELWIPLPCSCDDVEGNKV--VHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIAD 211
           ++ G  L +PLPC+C +   N +  V+  ++V  G +V +IA     +   I  +N +  
Sbjct: 154 LDAGATLVVPLPCACFNSTDNNLPAVYLSYVVRVGDTVQSIAATHATTVTDISNVNAMG- 213

Query: 212 ARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCK 271
           +  +    +L IPL AC+S+    + D+  L+ NGTY  TA NCV C C    ++ L C 
Sbjct: 214 SPIVAPGDILAIPLPACASMFPNSASDYGLLVANGTYALTAGNCVQCSCGPG-DLKLYCT 273

Query: 272 PSQLKPPSQKSSNWSTCPAMPCEGSNLLLGN----STASGCSTTTCAYAGFSKQTIFTNI 331
           P+ L          ++C +M C  SNL+LGN    ST+ GC+ ++C+YAG    TI T++
Sbjct: 274 PASLT---------ASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSL 333

Query: 332 ST--LNTCPGPEGGP 334
           S+    TCPGP   P
Sbjct: 334 SSGLQPTCPGPHQFP 335

[Close]

BLAST of Carg26360-RA vs. TrEMBL
Match: tr|A0A1S3BJB8|A0A1S3BJB8_CUCME (lysM domain-containing GPI-anchored protein 2 OS=Cucumis melo OX=3656 GN=LOC103490220 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 7.8e-162
Identity = 287/361 (79.50%), Postives = 314/361 (86.98%), Query Frame = 0


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  V +AQ PPRFNCSSTSKC SLIDYIPPNATT+  V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATVSLAQTPPRFNCSSTSKCHSLIDYIPPNATTIAAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITF 126
           FLGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE TF
Sbjct: 68  FLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAESTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIA 186
           ARLVT LQI  AN +PDPNKI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAI 
Sbjct: 128 ARLVTFLQIQIANKLPDPNKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVESGSSISAIG 187

Query: 187 TMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
             +NVS+  IL+LNGIAD +DL+ASQVLDIPLKACSS+IRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILRLNGIADPKDLQASQVLDIPLKACSSMIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTC 306
           NCVLC+CDAAKN ILDCKPSQLKP S KSSNWS+CPAM CEGSNLLLGNSTAS C+TTTC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSQLKPSSVKSSNWSSCPAMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 AYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLLSFGSLL 366
           AYAGFSKQTIFTNISTLNTCPGPE    DN N ASRT SQGLN+  LV F H+L+FG LL
Sbjct: 308 AYAGFSKQTIFTNISTLNTCPGPE----DNGNGASRTASQGLNLAYLVAFTHVLAFGLLL 364

Query: 367 I 368
           I
Sbjct: 368 I 364

[Close]

BLAST of Carg26360-RA vs. TrEMBL
Match: tr|A0A0A0K4W1|A0A0A0K4W1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024010 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 1.8e-158
Identity = 283/362 (78.18%), Postives = 309/362 (85.36%), Query Frame = 0


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  + +AQ PPRFNCSSTSKC SLIDYI PNATT+G V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATLSLAQTPPRFNCSSTSKCHSLIDYISPNATTIGAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITF 126
            LGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE+TF
Sbjct: 68  LLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAEVTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIA 186
           ARLVT LQI  AN IPDP KI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAIA
Sbjct: 128 ARLVTFLQIQIANEIPDPRKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVEMGSSISAIA 187

Query: 187 TMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
             +NVS+  ILKLNGIAD + L+ASQVLDIPLKACSSVIRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILKLNGIADPKGLQASQVLDIPLKACSSVIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTC 306
           NCVLC+CDAAKN ILDCKPS LKP S KSSNWS+CP M CEGSNLLLGNSTAS C+TTTC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSPLKPSSVKSSNWSSCPTMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 AYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFMHLLSFGSLL 366
           AYAGFSKQTIFTNISTLNTCP    GP DN N ASRTGSQGLN+  LV   H+L+   LL
Sbjct: 308 AYAGFSKQTIFTNISTLNTCP----GPSDNGNGASRTGSQGLNLAYLVAITHVLALSLLL 365

Query: 367 IQ 369
           IQ
Sbjct: 368 IQ 365

[Close]

BLAST of Carg26360-RA vs. TrEMBL
Match: tr|A0A2K1Z7U6|A0A2K1Z7U6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G143300v3 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 182/323 (56.35%), Postives = 226/323 (69.97%), Query Frame = 0


Query: 8   MFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSF 67
           +   +++FS +     +Q    F CSS S C SLIDYI PN TT+  +  LF +K++ S 
Sbjct: 8   LLLTLLLFSTLPTKSSSQ---TFKCSSPSTCRSLIDYISPNTTTLSHIKTLFSIKNVRSI 67

Query: 68  LGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFA 127
           LGANN P++T  +F++PA Q IKIPF C C N TGLS+K+PIY VQ  + L  IA   F+
Sbjct: 68  LGANNLPLSTLPNFTIPAKQPIKIPFTCLCINNTGLSNKQPIYTVQKDDGLYHIAAEVFS 127

Query: 128 RLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIAT 187
            LVT  +IAA N + D N IEVGQELWIPLPCSCDDV+G KVVHYGH+VE GSS+  IA 
Sbjct: 128 GLVTYQEIAAVNNVTDVNLIEVGQELWIPLPCSCDDVDGVKVVHYGHVVEAGSSLEFIAQ 187

Query: 188 MFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANN 247
            +  S   ++KLNGIA+   L A QVLD+PL+AC+S +R DSLD PFL+PN TY +TANN
Sbjct: 188 EYGTSRNTLMKLNGIANGSSLLAGQVLDVPLQACNSSVRIDSLDSPFLVPNNTYFFTANN 247

Query: 248 CVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTCA 307
           CV C+CDAA N  L C+PS  KP     S+WS CPAM CEG  L +GN+T SGC+TTTCA
Sbjct: 248 CVKCKCDAANNWTLQCEPSGKKP-----SSWSACPAMQCEGGLLTIGNTTTSGCNTTTCA 307

Query: 308 YAGFS-KQTIFTNISTLNTCPGP 330
           YAGFS  Q IFT ++T +TCP P
Sbjct: 308 YAGFSGDQNIFTALATQSTCPLP 322

[Close]

BLAST of Carg26360-RA vs. TrEMBL
Match: tr|B9SIJ2|B9SIJ2_RICCO (LysM domain GPI-anchored protein 2, putative OS=Ricinus communis OX=3988 GN=RCOM_1419770 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 177/362 (48.90%), Postives = 241/362 (66.57%), Query Frame = 0


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNC--SSTSKCGSLIDYIPPNATTVGDVMKL 60
           M   +      +++ + + A+  + P   F C  SS+S C +LIDYIPPN T++  +  L
Sbjct: 1   MGLSSTEFLLNLLLLTVLFAISTSAP---FKCTSSSSSTCHALIDYIPPNTTSLSSLKTL 60

Query: 61  FDVKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCGNGTGLSDKRPIYKVQSGNTL 120
           F VK+L S LGANN P++T S+ ++PA   IKIPF C C NGTG+S+ +PIY VQ G+ L
Sbjct: 61  FSVKNLRSILGANNLPLSTPSNNNVPAQTTIKIPFPCICSNGTGISNSKPIYIVQPGDIL 120

Query: 121 DKIAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVEP 180
           D IA   F+ LVT  +IAA N IPD N IE GQ+L IPLPCSCD+V G +VVHYGH+VE 
Sbjct: 121 DHIAREVFSGLVTFQEIAAVNSIPDANVIEAGQKLRIPLPCSCDEVGGERVVHYGHIVES 180

Query: 181 GSSVSAIATMFNVSDAIILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPN 240
           GS++  IA  +  S  I++ LN   +   L A Q+LD+PL+AC+S +   SLD+P L+PN
Sbjct: 181 GSTLEVIAEEYGTSKDILMSLNNGVNDTSLLAGQILDVPLQACNSSVTTSSLDYPLLVPN 240

Query: 241 GTYDYTANNCVLCECDAAKNMILDCKPSQLKPPSQKSSNWSTCPAMPCEGS-NLLLGNST 300
           GTY +TAN+CV C+CD+A N IL C+PS L   +  +S WSTCP M C+G+ NL +GNST
Sbjct: 241 GTYAFTANSCVRCKCDSANNWILQCEPSGL---TIANSTWSTCPPMKCDGADNLSIGNST 300

Query: 301 ASGCSTTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLNVVGLVVFM 360
            +GC+TTTCAYAGFS QTI T ++T++TCP    G      S +   S G++   L++ +
Sbjct: 301 NAGCNTTTCAYAGFSNQTILTALATVSTCPASTPG----SGSDNYASSSGMSWKFLIISL 352

[Close]

BLAST of Carg26360-RA vs. TrEMBL
Match: tr|A0A0H3W5D2|A0A0H3W5D2_POPCA (CEBiP1 OS=Populus canadensis OX=3690 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.0e-90
Identity = 175/316 (55.38%), Postives = 219/316 (69.30%), Query Frame = 0


Query: 30  FNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQKI 89
           F C++ + C SLIDYI PNATT   +  LF VK++ S L ANN P++T  + ++PASQ I
Sbjct: 27  FKCNTPTTCHSLIDYISPNATTFSHIKTLFSVKNIHSILAANNLPLSTLPNSTIPASQPI 86

Query: 90  KIPFNCKCGNGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 149
           KI F C C N TG S+K+PIY VQ  + L  IA   F+ LVT  +IAA N IPD N I+V
Sbjct: 87  KISFPCMCINNTGHSNKQPIYTVQKDDGLSHIAAEVFSGLVTYQEIAAVNNIPDVNLIKV 146

Query: 150 GQELWIPLPCSCDDVEGNKVVHYGHLVEPGSSVSAIATMFNVSDAIILKLNGIADARDLK 209
           GQ+LWIPLPC+CDDV+G KVVHYGH+VE GSS+  IA  +  S   ++KLNG+ D+  L 
Sbjct: 147 GQKLWIPLPCNCDDVDGVKVVHYGHVVEAGSSLELIAQEYGTSTDTLVKLNGVNDS-SLL 206

Query: 210 ASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMILDCKPSQLK 269
           A QVLD+PL+AC+S +  DS+D+P L+PN TY +TANNCV C+CDAA N  L C+ S +K
Sbjct: 207 AGQVLDVPLQACNSSVSSDSVDYPLLVPNSTYFFTANNCVKCKCDAANNWTLQCEASGIK 266

Query: 270 PPSQKSSNWSTCPAMPCEGSNLLLGNSTASGCSTTTCAYAGFSK-QTIFTNISTLNTCPG 329
           P     SNWSTCPAM CEG  L + NST SGC+ TTCAYAGFSK Q+IFT ++T + CP 
Sbjct: 267 P-----SNWSTCPAMQCEGGLLSIDNSTTSGCNITTCAYAGFSKNQSIFTTLATRSICPV 326

Query: 330 PEGGPQDNPNSASRTG 345
                    N ASRTG
Sbjct: 327 TAA----PGNYASRTG 332

The following BLAST results are available for this feature:

BLAST of Carg26360-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529739.1	2.1e-206	98.10	lysM domain-containing GPI-anchored protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022928220.1	2.5e-204	96.74	lysM domain-containing GPI-anchored protein 2 [Cucurbita moschata]	[more]
XP_022989427.1	3.4e-201	95.92	lysM domain-containing GPI-anchored protein 2 [Cucurbita maxima]	[more]
XP_008447867.1	1.2e-161	79.50	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis melo]	[more]
XP_004153824.1	2.7e-158	78.18	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis sativus] >KGN4...	[more]

BLAST of Carg26360-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17120.1	3.5e-75	45.88	lysm domain GPI-anchored protein 2 precursor	[more]
AT1G21880.2	1.0e-37	32.69	lysm domain GPI-anchored protein 1 precursor	[more]
AT1G77630.1	6.5e-37	33.01	Peptidoglycan-binding LysM domain-containing protein	[more]
AT3G21630.1	2.3e-05	26.77	chitin elicitor receptor kinase 1	[more]

BLAST of Carg26360-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23006\|LYM2_ARATH	6.4e-74	45.88	LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q8H8C7\|CEBIP_ORYSJ	3.1e-60	42.72	Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica OX=39947 GN=CEBI...	[more]
sp\|Q93ZH0\|LYM1_ARATH	1.8e-36	32.69	LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q6NPN4\|LYM3_ARATH	1.2e-35	33.01	LysM domain-containing GPI-anchored protein 3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q69T51\|LYP6_ORYSJ	3.8e-34	32.06	LysM domain-containing GPI-anchored protein LYP6 OS=Oryza sativa subsp. japonica...	[more]

BLAST of Carg26360-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJB8\|A0A1S3BJB8_CUCME	7.8e-162	79.50	lysM domain-containing GPI-anchored protein 2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0K4W1\|A0A0A0K4W1_CUCSA	1.8e-158	78.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024010 PE=4 SV=1	[more]
tr\|A0A2K1Z7U6\|A0A2K1Z7U6_POPTR	1.3e-95	56.35	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G143300v3 PE=...	[more]
tr\|B9SIJ2\|B9SIJ2_RICCO	2.5e-91	48.90	LysM domain GPI-anchored protein 2, putative OS=Ricinus communis OX=3988 GN=RCOM...	[more]
tr\|A0A0H3W5D2\|A0A0H3W5D2_POPCA	8.0e-90	55.38	CEBiP1 OS=Populus canadensis OX=3690 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036779	LysM_dom_sf
IPR018392	LysM_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg26360	Carg26360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg26360-RA	Carg26360-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26360-RA.three_prime_UTR.1	Carg26360-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26360-RA.CDS.4	Carg26360-RA.CDS.4	CDS
Carg26360-RA.CDS.3	Carg26360-RA.CDS.3	CDS
Carg26360-RA.CDS.2	Carg26360-RA.CDS.2	CDS
Carg26360-RA.CDS.1	Carg26360-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26360-RA.five_prime_UTR.1	Carg26360-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg26360-RA.exon.4	Carg26360-RA.exon.4	exon
Carg26360-RA.exon.3	Carg26360-RA.exon.3	exon
Carg26360-RA.exon.2	Carg26360-RA.exon.2	exon
Carg26360-RA.exon.1	Carg26360-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 109..156 e-value: 4.3E-8 score: 42.9 coord: 173..217 e-value: 2.7E-6 score: 36.9
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 110..156 e-value: 7.1E-10 score: 38.7 coord: 175..217 e-value: 1.6E-4 score: 21.6
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 108..155 score: 12.475
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 172..216 score: 11.221
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 174..216 e-value: 4.53268E-5 score: 39.7761
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 109..155 e-value: 1.1549E-8 score: 49.7913
IPR036779	LysM domain superfamily	GENE3D	G3DSA:3.10.350.10		coord: 104..167 e-value: 1.3E-12 score: 49.1
IPR036779	LysM domain superfamily	GENE3D	G3DSA:3.10.350.10		coord: 168..224 e-value: 3.4E-7 score: 31.7
None	No IPR available	PANTHER	PTHR33734	FAMILY NOT NAMED	coord: 6..360
None	No IPR available	PANTHER	PTHR33734:SF5	LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2	coord: 6..360
None	No IPR available	SUPERFAMILY	SSF54106	LysM domain	coord: 173..217
None	No IPR available	SUPERFAMILY	SSF54106	LysM domain	coord: 109..157