Carg26190-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCGTTAATCCCCGTAATTCGATCAGTCAACAAAGTTCTGAGTTCAAGATTCCCATCTCAATGAAGAAGACGAAGCATTCTCTGTTTCGGACTTCCAAAAGACCCGAAATTTCAGTTTAAAAACCCGACTCCCGACCCGTTTTTCACAGAACCAAAAAAAAGAATGGAGCTTCCGATTTTCTCTGTATCTTCAAACACTTCAACGATGTCGTTTGGTGCAAGAATCGGGATCTGTTCCACTTCAACCTCGAGGATTTCCCATTTCCGGGTCAGAAAGCGCGCCGTCGGTAGGGTTCGGTTGCCGTCCGGCGTCAGGGCGTCGGCGGAGCCGAGGAGTGAAAGATTGGAGGAGGGACAGACACGTGGGAGGTTCACCGGACCAGCCATGGAAATGACCACACTGGATGCGAGTTTCAGAGAAACAGAGTTCCCTGTTTGGGAGAAGATTGGTGCTGTTGTGAGGCTCAGCTATGGTGTTGGTGAGTCAAAAATGATTCCTTTAGAGATTTAAATTTGTGGGTTTCTTTTATTTTTATGTTTTTCATGGAGATTTGGATTGAAATCTGTGTTTTTGTGTTTGTTCTTGGTGTTCTTGAAGGGATTTATGGTGCAATGGCTCTGGCTGGAAGATTTATATGTTCAATATCTGGGATTGATTGGATGGGCGGGTTCCAACCATCTTTGGATGCTATTTTGGGAGGGCTTGGCTATGCTGTCCCTCCAATTATGGCCCTGCTCTTCATACTTGACGTAAGCTTATTTCTTAAGTGAACATGTTCTTTAGCTTGATTGGATTTGGATAAGATGTGTATGTTTTGAGTTTCTTGATGGAAGGAATTTTCATGTTTTTTACAAAAGTTGTTTGGTTGGTTCTGAATTTTGAGTGGAAAATATGAACAATGTAGGGATTGTTTGGTAATCAAGCTTTTTTGGCTTGAAATCTGCTTTTGGAAAGGTTCTTTTGATGCTTGTTAGGTTTCAAGTTACTGTTAGTTTTGTCCAAAACTGATAAGAACTTTCTGATGGCATGAAATTGGGATTGTTTGTAGGATGAAGTTGTGAAGTTATCGCCTCATGCTCGTGCAATTAGAGACGTTGAAGACGAGGAGCTTCGAAGCTTCTTTTACGGAATGTCTCCATGGCAGGTAAATGGTTTAATCTATGAGATCCCACGTCGGTTGGGAGGAGAATGAATCATTCTTTATAAGAGTGTTGGAGCCTCTAAAAAAACGCATTTTAAAAACCTTGACGGGAAGCCTGAAAGGGAAAATCCAAAGAGGACAATATCTGTTAGCGGTGGGCTTGTGTTGTTACAAATGGTGTTAGAGATAGACACCGAACGATGTGCCAACGAGGAGGGTAAGCCTCGAAGGGAGGTGGACACGAGGCGGTGTGCTAGCAAGGATGTTGGGCCCCAAAGGGGGTGGATTTGGGAGTCCCACATCGATTGGAGGAGGAAACGAGTGCCAGCGAGGACGCTGGGCCCTGAAGGGGGTGGATTATGAGATCCCACGTCGATTGTGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTAAAAAAAAAAAGTGATTTAAAAACTTTGAGGGAAAGTCCAAAGAGGACAATATTGGCTAGCGGTGGGCTTGTGCTATTACAAATGGTATCAAAGCCAGACACTAGACGATGTGCTAGCGAGGAGGCTAAGCCCCGAAGAGGGGTGGTTACAAGGCTGTGTACCAGCAAGGACGCTAGGTCCCAAAAGGGGTGGATTGAGGGGTCCCACATAGATTGAAGAAGGAAATGAGTGCCAGCGAGGATGCTAAGCCCCTGAAGGGGGTGGATTGTGAGATCCCACATCAGTTGGGGAGGAGAACGAAACATTCTTTATGAGTATGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGAGAAGTCCATAAGGGAAAGCTCAAAGAGGACAACATCTGCTAGTGGTGGACATAGGCCGTTACATAATCTCTCCCACTTGCTAGCTGCACAAGGAATGAGAATGCTTTTTGTTTACTTTGTATTCCAAATTTTGCAGTTCATTTTGATCGTTGCAGCAAGCTCGGTCGGGGAGGAGCTCTTTTACCGAGCAGCCGTTCAGGTTCGTTCTTTCGATACTAAGACATTATTCACCAGTTCTATATATGCAATTGCTGGATGCTGATTGAACATTTCTCTTCCCTTTCTTAACAATTTAGGGAGCACTTGCTGATATATTCTTAAGAAGTACTGATATTGGAGCTGATGTTCAAGGAATGGCATCTCTGGTATGCAAAATTGTCCCTTTTTATCTCTTCACTTCTCGTGATGATATCGGTTTTCTCGTCGTGTATAACTTTGTACCATGCTCGTTCAATTGTAGACCGGCGTGCTGCCTCCATTTGTGCCATTTGCACAAGCATTTGCAGCTGTTATCACAGCTGCTCTTACAGGTTCACTATATTACGTCGCTGCGTCGCCGAAAGGTTGATATCATATCATATCAAATCAAATCATTTAAACGACACTCGGTTTTCAATTTGGTTGATAGTGAATTCCTTGTTTTCTTCTCCAGATCCTACTTATGTAGTTGCTCCGGTTTTGCAATCTCGTTCTGGTCGCGACGATCTTAAAAAGCTTTTCGCAGGTTCGATTCAAACGTAGTTCACTTCATGATTGTGCTATGCATACAAAATGACAATCTCCCTATTTTCAGTTCATCATAAGAACGTTCTCGCTCGACATTTATATCTTTTTCGTGTAAACGTCTGCAGCGTGGTACGAGAGAAGACAAATGAAGAAGATCTACTCTCCGCTTCTCGAAGGACTCCTCGCTCTCTATCTCGGTTTCGAATGGATCCAGGTAAGAACTTTCGTAGCCAAGCTACACAATGTATTAGTTTCATGAGGCAAGAAACTTAGTTAGTATGTGTTTTGTGATGATGTTTTCAGACCGATAACATTCTTGCTCCGATGATCACGCACGGGATATACTCGGCGGTGATATTGGGACATGGACTTTGGAAGATCCACGACCACCGGAGAAGGCTACGACAGAGAATTCAGCAGCTTAAGATGGAAGGAAAAGGGTCAGATGGTTTGTGAAAGGGAAGGGGAAGAGTTTATATAGAGAGCAAAAAGAACATGTAAATTATAGGTTGGCAGAGCCAAAATTTTCCATCTTGATCACAAGCTGTTCATACAAGAATTGAAGTATATATTGTATGGATCAAGAGACTTAAACGTGTGCATATGAAGTTATAGTGATATTTTAGATACTTAAAGTCTAAATTTATAGAAATGTTTTTATAGAACGT TCTCGTTAATCCCCGTAATTCGATCAGTCAACAAAGTTCTGAGTTCAAGATTCCCATCTCAATGAAGAAGACGAAGCATTCTCTGTTTCGGACTTCCAAAAGACCCGAAATTTCAGTTTAAAAACCCGACTCCCGACCCGTTTTTCACAGAACCAAAAAAAAGAATGGAGCTTCCGATTTTCTCTGTATCTTCAAACACTTCAACGATGTCGTTTGGTGCAAGAATCGGGATCTGTTCCACTTCAACCTCGAGGATTTCCCATTTCCGGGTCAGAAAGCGCGCCGTCGGTAGGGTTCGGTTGCCGTCCGGCGTCAGGGCGTCGGCGGAGCCGAGGAGTGAAAGATTGGAGGAGGGACAGACACGTGGGAGGTTCACCGGACCAGCCATGGAAATGACCACACTGGATGCGAGTTTCAGAGAAACAGAGTTCCCTGTTTGGGAGAAGATTGGTGCTGTTGTGAGGCTCAGCTATGGTGTTGGGATTTATGGTGCAATGGCTCTGGCTGGAAGATTTATATGTTCAATATCTGGGATTGATTGGATGGGCGGGTTCCAACCATCTTTGGATGCTATTTTGGGAGGGCTTGGCTATGCTGTCCCTCCAATTATGGCCCTGCTCTTCATACTTGACGGAGCACTTGCTGATATATTCTTAAGAAGTACTGATATTGGAGCTGATGTTCAAGGAATGGCATCTCTGACCGGCGTGCTGCCTCCATTTGTGCCATTTGCACAAGCATTTGCAGCTGTTATCACAGCTGCTCTTACAGGTTCACTATATTACGTCGCTGCGTCGCCGAAAGATCCTACTTATGTAGTTGCTCCGGTTTTGCAATCTCGTTCTGGTCGCGACGATCTTAAAAAGCTTTTCGCAGCGTGGTACGAGAGAAGACAAATGAAGAAGATCTACTCTCCGCTTCTCGAAGGACTCCTCGCTCTCTATCTCGGTTTCGAATGGATCCAGACCGATAACATTCTTGCTCCGATGATCACGCACGGGATATACTCGGCGGTGATATTGGGACATGGACTTTGGAAGATCCACGACCACCGGAGAAGGCTACGACAGAGAATTCAGCAGCTTAAGATGGAAGGAAAAGGGTCAGATGGTTTGTGAAAGGGAAGGGGAAGAGTTTATATAGAGAGCAAAAAGAACATGTAAATTATAGGTTGGCAGAGCCAAAATTTTCCATCTTGATCACAAGCTGTTCATACAAGAATTGAAGTATATATTGTATGGATCAAGAGACTTAAACGTGTGCATATGAAGTTATAGTGATATTTTAGATACTTAAAGTCTAAATTTATAGAAATGTTTTTATAGAACGT ATGGAGCTTCCGATTTTCTCTGTATCTTCAAACACTTCAACGATGTCGTTTGGTGCAAGAATCGGGATCTGTTCCACTTCAACCTCGAGGATTTCCCATTTCCGGGTCAGAAAGCGCGCCGTCGGTAGGGTTCGGTTGCCGTCCGGCGTCAGGGCGTCGGCGGAGCCGAGGAGTGAAAGATTGGAGGAGGGACAGACACGTGGGAGGTTCACCGGACCAGCCATGGAAATGACCACACTGGATGCGAGTTTCAGAGAAACAGAGTTCCCTGTTTGGGAGAAGATTGGTGCTGTTGTGAGGCTCAGCTATGGTGTTGGGATTTATGGTGCAATGGCTCTGGCTGGAAGATTTATATGTTCAATATCTGGGATTGATTGGATGGGCGGGTTCCAACCATCTTTGGATGCTATTTTGGGAGGGCTTGGCTATGCTGTCCCTCCAATTATGGCCCTGCTCTTCATACTTGACGGAGCACTTGCTGATATATTCTTAAGAAGTACTGATATTGGAGCTGATGTTCAAGGAATGGCATCTCTGACCGGCGTGCTGCCTCCATTTGTGCCATTTGCACAAGCATTTGCAGCTGTTATCACAGCTGCTCTTACAGGTTCACTATATTACGTCGCTGCGTCGCCGAAAGATCCTACTTATGTAGTTGCTCCGGTTTTGCAATCTCGTTCTGGTCGCGACGATCTTAAAAAGCTTTTCGCAGCGTGGTACGAGAGAAGACAAATGAAGAAGATCTACTCTCCGCTTCTCGAAGGACTCCTCGCTCTCTATCTCGGTTTCGAATGGATCCAGACCGATAACATTCTTGCTCCGATGATCACGCACGGGATATACTCGGCGGTGATATTGGGACATGGACTTTGGAAGATCCACGACCACCGGAGAAGGCTACGACAGAGAATTCAGCAGCTTAAGATGGAAGGAAAAGGGTCAGATGGTTTGTGA MELPIFSVSSNTSTMSFGARIGICSTSTSRISHFRVRKRAVGRVRLPSGVRASAEPRSERLEEGQTRGRFTGPAMEMTTLDASFRETEFPVWEKIGAVVRLSYGVGIYGAMALAGRFICSISGIDWMGGFQPSLDAILGGLGYAVPPIMALLFILDGALADIFLRSTDIGADVQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVAASPKDPTYVVAPVLQSRSGRDDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTDNILAPMITHGIYSAVILGHGLWKIHDHRRRLRQRIQQLKMEGKGSDGL
BLAST of Carg26190-RA vs. NCBI nr
Match: XP_022923382.1 (uncharacterized protein LOC111431096 [Cucurbita moschata]) HSP 1 Score: 586.6 bits (1511), Expect = 4.9e-164 Identity = 314/370 (84.86%), Postives = 314/370 (84.86%), Query Frame = 0
BLAST of Carg26190-RA vs. NCBI nr
Match: XP_023553576.1 (uncharacterized protein LOC111810947 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 585.9 bits (1509), Expect = 8.4e-164 Identity = 314/370 (84.86%), Postives = 314/370 (84.86%), Query Frame = 0
BLAST of Carg26190-RA vs. NCBI nr
Match: XP_022965084.1 (uncharacterized protein LOC111465053 [Cucurbita maxima]) HSP 1 Score: 580.5 bits (1495), Expect = 3.5e-162 Identity = 311/370 (84.05%), Postives = 313/370 (84.59%), Query Frame = 0
BLAST of Carg26190-RA vs. NCBI nr
Match: XP_008448701.1 (PREDICTED: uncharacterized protein LOC103490793 [Cucumis melo]) HSP 1 Score: 539.7 bits (1389), Expect = 6.9e-150 Identity = 289/370 (78.11%), Postives = 299/370 (80.81%), Query Frame = 0
BLAST of Carg26190-RA vs. NCBI nr
Match: XP_011650345.1 (PREDICTED: uncharacterized protein LOC101203999 [Cucumis sativus] >XP_011650346.1 PREDICTED: uncharacterized protein LOC101203999 [Cucumis sativus] >KGN55774.1 hypothetical protein Csa_3G011760 [Cucumis sativus]) HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148 Identity = 287/370 (77.57%), Postives = 296/370 (80.00%), Query Frame = 0
BLAST of Carg26190-RA vs. TAIR10
Match: AT2G35260.1 (unknown protein) HSP 1 Score: 368.6 bits (945), Expect = 3.8e-102 Identity = 213/383 (55.61%), Postives = 254/383 (66.32%), Query Frame = 0
BLAST of Carg26190-RA vs. TAIR10
Match: AT4G17840.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 334.3 bits (856), Expect = 8.0e-92 Identity = 171/277 (61.73%), Postives = 202/277 (72.92%), Query Frame = 0
BLAST of Carg26190-RA vs. TrEMBL
Match: tr|A0A1S3BL73|A0A1S3BL73_CUCME (uncharacterized protein LOC103490793 OS=Cucumis melo OX=3656 GN=LOC103490793 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 4.5e-150 Identity = 289/370 (78.11%), Postives = 299/370 (80.81%), Query Frame = 0
BLAST of Carg26190-RA vs. TrEMBL
Match: tr|A0A0A0L406|A0A0A0L406_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011760 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 1.5e-148 Identity = 287/370 (77.57%), Postives = 296/370 (80.00%), Query Frame = 0
BLAST of Carg26190-RA vs. TrEMBL
Match: tr|A0A2P4IXD9|A0A2P4IXD9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58678 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 6.6e-117 Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0
BLAST of Carg26190-RA vs. TrEMBL
Match: tr|W9RWC4|W9RWC4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023278 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 4.3e-116 Identity = 246/372 (66.13%), Postives = 268/372 (72.04%), Query Frame = 0
BLAST of Carg26190-RA vs. TrEMBL
Match: tr|A0A1Q3BMI3|A0A1Q3BMI3_CEPFO (Abi domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12590 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 1.6e-115 Identity = 236/372 (63.44%), Postives = 269/372 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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