Carg25759-RA (mRNA) Silver-seed gourd

NameCarg25759-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_266 : 196482 .. 197533 (+)
Sequence length312
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATATCCGTGGAAAATGCTCTCGATGTTCTTGGAGTCTCCGATGAGGCCTCGTTCGGTGATATTCTTCGTGCTAGGAAGTCGATTATGGCCGCTTGCAAGGACGACCAAGAAACAGTCGCGCAGGTAGAAGGAGTTCGATTTTTTTACTTCGTTTGGGGAATTTTGGTATTTTAGGGATTTAAATATTGCGTTCCCTTTGATTTGAGTATTGGCATTCGGAATTGGGAAGTCCGATTGATTTGGTAATTATTCGTGTGATCTTTGTGTGTGTGTGTGTGTTTCTTTATGTTACTAATATGATCGGCATGGAGCTTGCGAACTTTTTGAGTGAGTTAAGCTTTCCTTTTGTTTTTCCAACACTCTTTAGAATGGCTATTACCACTTTAGCAACGATCTTTGAGTTTCTGGCTCCGGCGGCAATTAGATTCGAACATTTCATTCAGATACTTGCTACTGCACGAGGAGGCAGTTATGGTTTTGAACGAAATACCGTACATGGATTATTAGATTTATTTGCATGTAGCTTTGTAGTTTCTTTGTATTTTTTTTTTTTACCAAAAGGAACGTGAAGCTTGGTAAGGAGTTCTGCAAGTGCTAATTCTTTGTGCTTTTTAGTTCTTACAAGATTTGGATATAAGTAAATCTTCACAAATTTGGAGAACAATTGAAGAAGTCGCACATTTTTTCTGCTTGCGAATACTGTTGAGGTTTTGTGAAATAAACTTGATGCTTGCGAATACTGGGTCTATTTCCTTTCGAATCAAAATTTATTTTTTATGCTACGTGTGATATTTATTTATCCTATTTGTATTACATATATTCATGAACTTGGACATAAATGAAGTGATTTCGTTTCTTGTGCACAAAAGTATGCTGAGAAATACAGATCTCACGTCTTGGAGCCATTGTATAGATCGTGCAATTTCCATATGATAATATTTGCAATTAGCTCCGCTGTTCTTCTTTGCAGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGATTGCAAGTAGACATCGCTCCGGTTCTCCTGCTGCTTTGATAAGTGACT

mRNA sequence

AGATATCCGTGGAAAATGCTCTCGATGTTCTTGGAGTCTCCGATGAGGCCTCGTTCGGTGATATTCTTCGTGCTAGGAAGTCGATTATGGCCGCTTGCAAGGACGACCAAGAAACAGTCGCGCAGAATGGCTATTACCACTTTAGCAACGATCTTTGAGTTTCTGGCTCCGGCGGCAATTAGATTCGAACATTTCATTCAGATACTTGCTACTGCACGAGGAGGCAGTTATGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGATTGCAAGTAGACATCGCTCCGGTTCTCCTGCTGCTTTGATAAGTGACT

Coding sequence (CDS)

ATGCTCTCGATGTTCTTGGAGTCTCCGATGAGGCCTCGTTCGGTGATATTCTTCGTGCTAGGAAGTCGATTATGGCCGCTTGCAAGGACGACCAAGAAACAGTCGCGCAGAATGGCTATTACCACTTTAGCAACGATCTTTGAGTTTCTGGCTCCGGCGGCAATTAGATTCGAACATTTCATTCAGATACTTGCTACTGCACGAGGAGGCAGTTATGGTGCAGTAGTCGGTTCTGCAGTTGAGAATTGA

Protein sequence

MLSMFLESPMRPRSVIFFVLGSRLWPLARTTKKQSRRMAITTLATIFEFLAPAAIRFEHFIQILATARGGSYGAVVGSAVEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg25759Carg25759gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg25759-RACarg25759-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg25759-RA.exon.1Carg25759-RA.exon.1exon
Carg25759-RA.exon.2Carg25759-RA.exon.2exon
Carg25759-RA.exon.3Carg25759-RA.exon.3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg25759-RA.five_prime_UTR.1Carg25759-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg25759-RA.CDS.1Carg25759-RA.CDS.1CDS
Carg25759-RA.CDS.2Carg25759-RA.CDS.2CDS
Carg25759-RA.CDS.3Carg25759-RA.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg25759-RA.three_prime_UTR.1Carg25759-RA.three_prime_UTR.1three_prime_UTR