Carg24739-RA (mRNA) Silver-seed gourd

NameCarg24739-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_259 : 121514 .. 123556 (+)
Sequence length807
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTGGAGATCAGGGCAGTCTGAGAGAGTGCTGGGAATACTGCCTGTTAATTTGTTCTCCCAAGCAAAAAATAAATGCAAGTTCTTAAGGTTGCCTACCGAAACCGGTATCTCGCCCGAAAGTTTGTTGTTGTCTACTTCCACATGAACCAAAGTCGAACAATTAAACATTTCCGGAGGTATTGAACCCGTAATCTGATTAAGACTTAGTTGAAACTCTTGAAGTTTAGGTAGCCGTCCTATACTTTTCGGTATGGTTCCATTTAGAAGATTTTCGGAAACGTCTAGGATTACGAGTTCCTCGCAGTCTCCAATCTCTTCTGGTATAGATTCTTCCAACAAGTTCAACCATAGAAAAAGTGTTTGAAGCTTTTTCAGCTTCCCAATTCCTCTAGGTATCCGCCCAGAAATGCTATTCTGATACAATATAAGAGTTTGCAACTCACTGCAGTTTCCGATCTCTTCCGGGATTGTGTTGAAAAGTTGTGCTTTATATATGACTATGTTCTGTATGTTTTTCAGCATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCGGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGGTATCGTCCCTTCAAACCCATTGCTTTGAAGGGACAAATCCTCCAGCTTCCCCAGCCTGCAAATCTCTTCTGGGATTTCTCCCAAAAGGTTATTTTGGCTAAGATCAAGAACTCTGAGCTCGTTATAATCTCCAAACTCTTTCGGGATTCTTCCGGTTATATTCGTCTCAGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTTGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCCGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGTGAGAAGAGCTCTACCCTGCTCATCAATGGAGTAACAACATGGAAAGAGACGGATACTTAGTGATAAAATCAAGGCTATGGCGAAGAATTGAGAAGGAATTAAGGGATTTCTTAGAATTGCAGCCATTGTTCTTCAAAACTTATGATACAAAATGATCCGATTTGGATTGAACAAAGGGGAAATCCATGTTTTGTTTATAGGAGAAGAAGAAAAAGAAGAACAGAGGTATGTGAATTCAAGATCCTTCTCTCTATTCCTTCTCTGGTTTGGTTCTTAGTTCTTAATACGGGAATATGGTTTTTTCTCTCCCTGTTTTTAATCTTTATTAAGCAAACAGTTCATTTTTCCTTTTGTTCTTTCCTTTGGTTAGCAAATCCTCATAAAATGGTTGTTTTTTTTTTGTTAAATATTCACCTTAGTTCATAATGTTTTAGGGAAATTCTCAACTTAGTCCTCAACTTTTTTAAAATTCTCAATTGTTCTATATCATTTTGTTCTTCTCTGTTTACTGAAAGGTGATTGATTGATCAATAATTTATGCTTTTATTGGACAGGTGCATTCCACGTGTCGTGTTCGATACGAGAATATGTTGATGCTACGATTGAGAAAAATCGAAAGATCAGGGGTAAGTTTAAAAATTTTAAAAGATTGAGGACCGAATTGAGAATTTTTCGAACGATGGTGGTTACTCGTTTTTTTTTTTATTAGTTGCAACATAAGTTGTTGGGGGAGTTTTGTTTATGGTAGGAACGATTAGAAATGACACGTATTTTCTATTGATATGAACTACTTTAGCCAACTTATATGGTTATTTATGGTTAAAATATAACCTCTTCATATGGCTATTTGAATCAAGGTTTCGGGTTGATCGACCTCTCGACATTGGAGAAACCGTCGAGGTCTTGGCCTTAA

mRNA sequence

ATGGCCTGGAGATCAGGGCAGTCTGAGAGAGTGCTGGGAATACTGCCTGTTAATTTGTTCTCCCAAGCAAAAAATAAATGCAAGTTCTTAAGGTTGCCTACCGAAACCGGTAGCCGTCCTATACTTTTCGGTATGGTTCCATTTAGAAGATTTTCGGAAACGTCTAGGATTACGAGTTCCTCGCAGTCTCCAATCTCTTCTGGTATAGATTCTTCCAACAACATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCGGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTTGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCCGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGAGAAGAAGAAAAAGAAGAACAGAGGTGCATTCCACGTGTCGTGTTCGATACGAGAATATGTTGATGCTACGATTGAGAAAAATCGAAAGATCAGGGGTTTCGGGTTGATCGACCTCTCGACATTGGAGAAACCGTCGAGGTCTTGGCCTTAA

Coding sequence (CDS)

ATGGCCTGGAGATCAGGGCAGTCTGAGAGAGTGCTGGGAATACTGCCTGTTAATTTGTTCTCCCAAGCAAAAAATAAATGCAAGTTCTTAAGGTTGCCTACCGAAACCGGTAGCCGTCCTATACTTTTCGGTATGGTTCCATTTAGAAGATTTTCGGAAACGTCTAGGATTACGAGTTCCTCGCAGTCTCCAATCTCTTCTGGTATAGATTCTTCCAACAACATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCGGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTTGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCCGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGAGAAGAAGAAAAAGAAGAACAGAGGTGCATTCCACGTGTCGTGTTCGATACGAGAATATGTTGATGCTACGATTGAGAAAAATCGAAAGATCAGGGGTTTCGGGTTGATCGACCTCTCGACATTGGAGAAACCGTCGAGGTCTTGGCCTTAA

Protein sequence

MAWRSGQSERVLGILPVNLFSQAKNKCKFLRLPTETGSRPILFGMVPFRRFSETSRITSSSQSPISSGIDSSNNIPIDEGRAPKIPVSARPNMTKLLQFPISIGNLPSRSLFPPALKRLSFCNIPMLFGISPLISLSASLRYTRFERFPIVNDITRVLKNLRAWKFDGNVPRKSSDARVISSTYPWELQTTPNHEHGVGSSGFHVLKASVELVRLLFHEKKKKKNRGAFHVSCSIREYVDATIEKNRKIRGFGLIDLSTLEKPSRSWP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg24739Carg24739gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24739-RA.exon.1Carg24739-RA.exon.1exon
Carg24739-RA.exon.2Carg24739-RA.exon.2exon
Carg24739-RA.exon.3Carg24739-RA.exon.3exon
Carg24739-RA.exon.4Carg24739-RA.exon.4exon
Carg24739-RA.exon.5Carg24739-RA.exon.5exon
Carg24739-RA.exon.6Carg24739-RA.exon.6exon
Carg24739-RA.exon.7Carg24739-RA.exon.7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24739-RA.CDS.1Carg24739-RA.CDS.1CDS
Carg24739-RA.CDS.2Carg24739-RA.CDS.2CDS
Carg24739-RA.CDS.3Carg24739-RA.CDS.3CDS
Carg24739-RA.CDS.4Carg24739-RA.CDS.4CDS
Carg24739-RA.CDS.5Carg24739-RA.CDS.5CDS
Carg24739-RA.CDS.6Carg24739-RA.CDS.6CDS
Carg24739-RA.CDS.7Carg24739-RA.CDS.7CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg24739-RACarg24739-RA-proteinpolypeptide