Carg24611-RA (mRNA) Silver-seed gourd

NameCarg24611-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_292 : 53996 .. 55620 (-)
Sequence length266
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGACCTTTCTTTATTATTCGTGGAGATCAGGGACGACACCCTCCTGGATATTGGAACTCTCTCTTGGGCCGCGGTAACCTGTAAGTAATACTATTCTCTTTATAATTTCCCCTGCACTAGTTCTTTGAATTCCAGATGTTCTTAAAGCCATTAGACGCATTCGTGCATTTTATCTCATGGATGTTTTAATGAGACTTCAGTAAATTTTAACTACTTGAGAGGTTAGTTTAATTTTAGCTGCTTTATATCTAGAATCTCCTATTGCATAGAGGGTGTCTGCAATAACCTTCGCGTCCCTTTTCTTTCAGTTCTTCATTTGCGGATGAACATCTCTTGCTTCAGCACATCGATACTATTACTATTTCACAGGTTAAGCAACATTAAGAAATGGAGAGTCACGAGAGTAGTGTAGCGCAGGATGGTGATGCAGAACTATTATGTGTTGGTGACTTGCAGATGTAATCGGTTAAAGTAAATGTTTCCATGAGATTGACTAAAGTGTCTGATCTGAAGGCTACTTGTCACCCATTCATCTGGCTTGTGAGAAGGTGAGAATGGTTTCAATGATTTAGTAACAATGGTCGAAATTTGAGAACGTACGTTGGCCAAAACTTTGGTATGACTTGCTTTAATCTGGGATGTGTACTTAAATTTTTGTAATCATATGCAAGTGTGTGGGAACAGATCATGGCTTTAGAGGTAGTATGTGTTTTAAAAATCCCACAAACGCACGCGTTTAGGTGGGGCCTCTTGATTTATGTTTCTGTCGCTAGATTTTGAAAACTCATTCTTGTTTTATGTTTCTGTTGAAGCCACTTTGAACTCTGTCTTTTTTGGTCAACTTTAGGGACTTCTAAAAATTTAGAGAAGAGTTACTGATTTAAGTTCTATTTGTATCTATCCTTCTAAACTTCTAGGGATATGGCATACAATGGAATTGAAGGACAGACCAGTTCATAGAATCCTAGAAAAAAAAAGGTAATGAATACACAAAGATGTACAGCCATACCTCGTTCTCGTAAGCTCAAATATGGAGGAGTTACGCCATTTGACACCTAAAAAAAGATGGTTGGATTCGGTTACACTAATGTTGAGGGAACTCCACTTCAATATATGAACCTACGAAATGTCACATGTGCAAGTTCAGGTACTTAATGTGCACGTGCATTTGGCTGGGCCACATATTGCATAGGGATGACAGTTAACTGTACGTCACTATAGTATTGTCTTTTGTGAATCGGAATAGTATATTGCAGCTCATGTAGAAATTAGAAACTGAAGTGGTTATCAAAATTTATTAGTTTCAAGTTAAATCCCCTTCTTGCCCGAGTATTTATAATTCATATTCTTGATTATCGATGAAGTTGTTAATGTTTTGGTGGGGATAGAGAGTCAGTCAATTGGTTGTATTTATTAATATTTTCTAAATTTATTTCCTTCGACTTTGAGAGCCCAGCCATCCTTTTCAGAACAACTGTCTGATGGGGGCTTTTTTTTCAGACAAATTTTCTAGGCCTGATGGACCTTCATCTGTCATTTTCAACTGGTCAAGCTGGTGACGTGCAAAATGGTTCTCTGGAGTAAATGTGAAGTTCAGATGAATTCTCAGTACCATTAAC

mRNA sequence

ATGATTAGACCTTTCTTTATTATTCGTGGAGATCAGGGACGACACCCTCCTGGATATTGGAACTCTCTCTTGGGCCGCGGTAACCTTTCTTCATTTGCGGATGAACATCTCTTGCTTCAGCACATCGATACTATTACTATTTCACAGACAAATTTTCTAGGCCTGATGGACCTTCATCTGTCATTTTCAACTGGTCAAGCTGGTGACGTGCAAAATGGTTCTCTGGAGTAAATGTGAAGTTCAGATGAATTCTCAGTACCATTAAC

Coding sequence (CDS)

ATGATTAGACCTTTCTTTATTATTCGTGGAGATCAGGGACGACACCCTCCTGGATATTGGAACTCTCTCTTGGGCCGCGGTAACCTTTCTTCATTTGCGGATGAACATCTCTTGCTTCAGCACATCGATACTATTACTATTTCACAGACAAATTTTCTAGGCCTGATGGACCTTCATCTGTCATTTTCAACTGGTCAAGCTGGTGACGTGCAAAATGGTTCTCTGGAGTAA

Protein sequence

MIRPFFIIRGDQGRHPPGYWNSLLGRGNLSSFADEHLLLQHIDTITISQTNFLGLMDLHLSFSTGQAGDVQNGSLE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg24611Carg24611gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg24611-RACarg24611-RA-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24611-RA.three_prime_UTR.1Carg24611-RA.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24611-RA.CDS.3Carg24611-RA.CDS.3CDS
Carg24611-RA.CDS.2Carg24611-RA.CDS.2CDS
Carg24611-RA.CDS.1Carg24611-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24611-RA.exon.3Carg24611-RA.exon.3exon
Carg24611-RA.exon.2Carg24611-RA.exon.2exon
Carg24611-RA.exon.1Carg24611-RA.exon.1exon