Carg24519-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGAACCGTCAGAAATCGACCACCACCACCTCGACTCCGCCACCGCCACCGCCACCGCCTCCACCACCGCCACAACCCACCACCTCAACGTCCCGGCCGGATTATCTCAGCACGAGTTTGACGACCTGAAGCATCTCGTCTTCCAATTTCACACCTACGAACTCCGCCCAGGCCAATGCTCCTCTCTCCTCTCTCAACTCATCCGAGCGCCGCGCGATGTCGTTTGGTCCGTCGTCCGCCGCTTCGATAAGCCTCAGATTTACAAGCACTTCATTAAGAGCTGTTCCGTCGCCGAAGACTTCATAATGACCGTAGGATGCACCAGAGATGTTTATGTAATCTCTGGCCTCCCGGCGGCGACGAGCACAGAGCGACTCGATATACTCGACGACGATCAGTATGTGACAGGTTTTAGTATCACAGGCGGCGACCATCGATTGAGGAACTACCGGTCCGTAACGACGGTGCACGAGATGGAGCGCGATGGTCAGATCTGGACTGTCGTTTTGGAATCGTACATCGTAGATGTGCCGGAAGGGAATACGGAAGAGGATACGCGTCTATTTGCAGATACGGTTGTGAAATTGAATCTGCAAAAGCTTACATCCGTCACGGAAGGAATGGCTCGTGCTGCCGCTGCCGCTGCCGCTGCTGCTGCTGCTGCTGCTACTGCTACTGCTACTGCTACTGCTGCTACTACTACTGCTGCAGGTACTACATCTACATCTTAATCACCACACAGATTTCAGAAAGAGAGAACGAAAGATTCTCGGAAAAAGAAGAACAAACGAAAGAACTATTGAAAAAGAAAATGATAGAGAGACATCATATTTCTTAATTTCTTCTTCTTCTGCTTCATCTTCCTTCTTAATTTTGTCTTCTCGTTGTGTTGGGGGAATCTGGTGTGCGACTGTGAGTATGGATTTCTTGAACGAAGAACAACGAAATAGCCTCTACTTCCAACAAGAAAACGAACTGATATTGATATTTATCAAGTATTCTTTAATTTCCTTACTCATTCTTCCTTGATTTTGTTCTTAATTTGTCCTCACTCGTTTCTTCTCGTTGTGTTGGGAGAATTTGGTGTGCGACTGTGAGTATGGATTTCTTGAATGAAGAACAACAAAATAGCCTCAACTGATATTGATATTTATCAAGTATCCTTCAATTTCGTTACTGATTTTTGCTTTCATTCCGTGTGCTTCAATTCAAAATTTGAATGATTATGATAGGAATCAAGTATAACAGTGACATTTCAGGCCATATATGCAAAATCTGAATGGCGGTTGTGCTTCTGGACATACATGTATGTACTCTGTACCATTGATCTCTCTGTAATTTACTCTGTTTTTCCTGTGTTTGGGGGCTGAAATTGGAAAGTATGTTATGAGTTTTCTTAGGGTTCTTGAATGTTCATCCTTAAAGAAAAAGAGAGAAGGTTAGTTTGTGTGGCTAAGTCAGTGCATTGATTAGTTGATAGTGATTTTTGAGAGAAGAGGGCAGAGGGTTTAGGGTTGAATGGATGTAGATGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGCATTATGGATGAACAAAGGAATCCATGGCTATGCTAAAATGGGGACAGCAATGAGTAGGCCATAG ATGGGTGAACCGTCAGAAATCGACCACCACCACCTCGACTCCGCCACCGCCACCGCCACCGCCTCCACCACCGCCACAACCCACCACCTCAACGTCCCGGCCGGATTATCTCAGCACGAGTTTGACGACCTGAAGCATCTCGTCTTCCAATTTCACACCTACGAACTCCGCCCAGGCCAATGCTCCTCTCTCCTCTCTCAACTCATCCGAGCGCCGCGCGATGTCGTTTGGTCCGTCGTCCGCCGCTTCGATAAGCCTCAGATTTACAAGCACTTCATTAAGAGCTGTTCCGTCGCCGAAGACTTCATAATGACCGTAGGATGCACCAGAGATGTTTATGTAATCTCTGGCCTCCCGGCGGCGACGAGCACAGAGCGACTCGATATACTCGACGACGATCAGTATGTGACAGGTTTTAGTATCACAGGCGGCGACCATCGATTGAGGAACTACCGGTCCGTAACGACGGTGCACGAGATGGAGCGCGATGGTCAGATCTGGACTGTCGTTTTGGAATCGTACATCGTAGATGTGCCGGAAGGGAATACGGAAGAGGATACGCGTCTATTTGCAGATACGGTTGTGAAATTGAATCTGCAAAAGCTTACATCCGTCACGGAAGGAATGGCTCGTGCTGCCGCTGCCGCTGCCGCTGCTGCTGCTGCTGCTGCTACTGCTACTGCTACTGCTACTGCTGCTACTACTACTGCTGCAGATGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGCATTATGGATGAACAAAGGAATCCATGGCTATGCTAAAATGGGGACAGCAATGAGTAGGCCATAG ATGGGTGAACCGTCAGAAATCGACCACCACCACCTCGACTCCGCCACCGCCACCGCCACCGCCTCCACCACCGCCACAACCCACCACCTCAACGTCCCGGCCGGATTATCTCAGCACGAGTTTGACGACCTGAAGCATCTCGTCTTCCAATTTCACACCTACGAACTCCGCCCAGGCCAATGCTCCTCTCTCCTCTCTCAACTCATCCGAGCGCCGCGCGATGTCGTTTGGTCCGTCGTCCGCCGCTTCGATAAGCCTCAGATTTACAAGCACTTCATTAAGAGCTGTTCCGTCGCCGAAGACTTCATAATGACCGTAGGATGCACCAGAGATGTTTATGTAATCTCTGGCCTCCCGGCGGCGACGAGCACAGAGCGACTCGATATACTCGACGACGATCAGTATGTGACAGGTTTTAGTATCACAGGCGGCGACCATCGATTGAGGAACTACCGGTCCGTAACGACGGTGCACGAGATGGAGCGCGATGGTCAGATCTGGACTGTCGTTTTGGAATCGTACATCGTAGATGTGCCGGAAGGGAATACGGAAGAGGATACGCGTCTATTTGCAGATACGGTTGTGAAATTGAATCTGCAAAAGCTTACATCCGTCACGGAAGGAATGGCTCGTGCTGCCGCTGCCGCTGCCGCTGCTGCTGCTGCTGCTGCTACTGCTACTGCTACTGCTACTGCTGCTACTACTACTGCTGCAGATGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGCATTATGGATGAACAAAGGAATCCATGGCTATGCTAAAATGGGGACAGCAATGAGTAGGCCATAG MGEPSEIDHHHLDSATATATASTTATTHHLNVPAGLSQHEFDDLKHLVFQFHTYELRPGQCSSLLSQLIRAPRDVVWSVVRRFDKPQIYKHFIKSCSVAEDFIMTVGCTRDVYVISGLPAATSTERLDILDDDQYVTGFSITGGDHRLRNYRSVTTVHEMERDGQIWTVVLESYIVDVPEGNTEEDTRLFADTVVKLNLQKLTSVTEGMARAAAAAAAAAAAAATATATATAATTTAADEEEEEEEEGRALWMNKGIHGYAKMGTAMSRP
BLAST of Carg24519-RA vs. NCBI nr
Match: XP_022963569.1 (abscisic acid receptor PYR1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Carg24519-RA vs. NCBI nr
Match: XP_022963571.1 (abscisic acid receptor PYR1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Carg24519-RA vs. NCBI nr
Match: XP_022967530.1 (abscisic acid receptor PYR1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108 Identity = 199/210 (94.76%), Postives = 199/210 (94.76%), Query Frame = 0
BLAST of Carg24519-RA vs. NCBI nr
Match: XP_022967531.1 (abscisic acid receptor PYR1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108 Identity = 199/210 (94.76%), Postives = 199/210 (94.76%), Query Frame = 0
BLAST of Carg24519-RA vs. NCBI nr
Match: XP_023554771.1 (abscisic acid receptor PYR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 399.8 bits (1026), Expect = 7.2e-108 Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of Carg24519-RA vs. TAIR10
Match: AT5G46790.1 (PYR1-like 1) HSP 1 Score: 274.6 bits (701), Expect = 6.4e-74 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 0
BLAST of Carg24519-RA vs. TAIR10
Match: AT4G17870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 112/179 (62.57%), Postives = 137/179 (76.54%), Query Frame = 0
BLAST of Carg24519-RA vs. TAIR10
Match: AT2G26040.1 (PYR1-like 2) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49 Identity = 93/170 (54.71%), Postives = 124/170 (72.94%), Query Frame = 0
BLAST of Carg24519-RA vs. TAIR10
Match: AT2G38310.1 (PYR1-like 4) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49 Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 0
BLAST of Carg24519-RA vs. TAIR10
Match: AT5G05440.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 183.3 bits (464), Expect = 1.9e-46 Identity = 86/159 (54.09%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of Carg24519-RA vs. Swiss-Prot
Match: sp|Q8VZS8|PYL1_ARATH (Abscisic acid receptor PYL1 OS=Arabidopsis thaliana OX=3702 GN=PYL1 PE=1 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.1e-72 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 0
BLAST of Carg24519-RA vs. Swiss-Prot
Match: sp|O49686|PYR1_ARATH (Abscisic acid receptor PYR1 OS=Arabidopsis thaliana OX=3702 GN=PYR1 PE=1 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 6.5e-60 Identity = 112/179 (62.57%), Postives = 137/179 (76.54%), Query Frame = 0
BLAST of Carg24519-RA vs. Swiss-Prot
Match: sp|Q7XBY6|PYL10_ORYSJ (Abscisic acid receptor PYL10 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL10 PE=1 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52 Identity = 108/178 (60.67%), Postives = 133/178 (74.72%), Query Frame = 0
BLAST of Carg24519-RA vs. Swiss-Prot
Match: sp|O80992|PYL2_ARATH (Abscisic acid receptor PYL2 OS=Arabidopsis thaliana OX=3702 GN=PYL2 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.5e-48 Identity = 93/170 (54.71%), Postives = 124/170 (72.94%), Query Frame = 0
BLAST of Carg24519-RA vs. Swiss-Prot
Match: sp|O80920|PYL4_ARATH (Abscisic acid receptor PYL4 OS=Arabidopsis thaliana OX=3702 GN=PYL4 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.5e-48 Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 0
BLAST of Carg24519-RA vs. TrEMBL
Match: tr|A0A1S3CQ54|A0A1S3CQ54_CUCME (abscisic acid receptor PYR1 OS=Cucumis melo OX=3656 GN=LOC103503542 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 8.5e-97 Identity = 177/208 (85.10%), Postives = 191/208 (91.83%), Query Frame = 0
BLAST of Carg24519-RA vs. TrEMBL
Match: tr|A0A0A0LF28|A0A0A0LF28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902310 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 4.6e-95 Identity = 187/208 (89.90%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of Carg24519-RA vs. TrEMBL
Match: tr|M5WAP6|M5WAP6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G036800 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 9.4e-80 Identity = 145/183 (79.23%), Postives = 163/183 (89.07%), Query Frame = 0
BLAST of Carg24519-RA vs. TrEMBL
Match: tr|A0A061G345|A0A061G345_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_015719 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 145/184 (78.80%), Postives = 159/184 (86.41%), Query Frame = 0
BLAST of Carg24519-RA vs. TrEMBL
Match: tr|A0A2R6PCY4|A0A2R6PCY4_ACTCH (Abscisic acid receptor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc29433 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.2e-78 Identity = 143/179 (79.89%), Postives = 160/179 (89.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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