Carg24059-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24059-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nuclease
Location	Cucurbita_argyrosperma_scaffold_166 : 331868 .. 334139 (-)
Sequence length	1782

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCAACCCTCCTTCATTTCCACAACTACCTAGATCCCACCATTTCCCTCCTCCCCTCCACTCCCTCCTCCGCCTCCTCCCCTTCCTCCGCCTCCCTCAACTCCCCCACCTCCCTCCTCTCCTCCTCCTCCGCCGCACCTCTCCTCTTCTTCACCATCGCCTCCGTTCTCTCCTTCATCGCCTCCTCTCGCCCCAACTCACCTTCCTCCCCTTCCGCTGCCTCCACCACCACTCCCCCTCCTCCCACCTCCTCCTCCTCCAATTACTCCGTCTCCGCCTTCCGCGCCTTCTCCACTGACCACATCTGGTCCCTCGAAGCCCCTCTTCGCGATGCCCATTGGCGCTCCCTCTATGGCATCTCCCACCCTGTCTTCACCACCATCGTTGACAAACTCAAACCCCACATTGCCCTCTCCAATCTCTCTCTCCCTTCCGATTACGCCGTTGCCATGGTCCTCTCCCGTCTCTGCCATGGCCTCTCCGCTAAAACCCTAGCTGCTCGTTTCTCTCTCGAACCCTATCTCGTTTCCAAAATCACCAACATGGTCACCCGTCTTTTGGCCACCAAACTCTACGCTGAATTCATCAAAATTCCGGTCAGTCGTCGGCGCTTGATTGAAACAACTCAAGCTTTTGAAAAATTGACTTCTCTACCCAATATGTGTGGTGCCATTGATAGCAGTCCAATCAAGCTTCGTCGATTGCCTGCCGACCAGAGCATTTCGACTAATTACAATTGCCGATTTGGGTATCCATCGGTTCTGCTTCAGGTCGTTGCTGACAACAAGAAGATCTTCTGGGATGTATGCGTTAAAGCTCCTGGTGGCAGTGATGATGCCAGCCATTTTAGGGATAGTCTAATGTACCATAGGCTTACTTCTGGTGATATTGTATGGGACAAGGTTATCAATGTTAGGGGTCACCATGTTCGTCCTTACATTGTTGGAGATTGGGGCTATCCTCTGTTGTCTTTCCTGTTGACACCATTTTCGTCAAACGGCATCGGCACGCCTGCACAGAACCTGTTCGATGGAATGCTAATGAAGGGTCGGTCTGTTGTGGTTGACGCAATTGGGTTGCTGAAGGCTAGGTGGAAGATTCTTCAGGATTTGAATGTGGGTTTAAGCCATGCTCCACAGACCATTGTTGCTTGTTGTGTATTGCATAATTTGTGTCAAATTGCGAAGGAGCCAGAGCCTGAACCTTTGAAGGATCCAGAGGAGACTGGCCCTGCGCCTGACATCCTTGACAGTGAGAAATCCCTCTGTTACTATGGTGAAAGTGTGAGGCAGGCGTTGGCTGATGATTTGCATCATAGGCTTTCATCAAGATAGCTAATGTTTAATCAATTCTTTTGAAGGGAAGATGAGTTTCCAGCCTCTGTTCTTCAAATGTAAGTTTTTCTTGTAGTTTTTTCATTCTTTCCATGTTTGATAGATAGTTTTGTTTCTGTTTTATGGCTTACATTAAGTGTGACATCCCACGTCGGTTGGTTGGGGAGGAGAACGAAGCATTTCTTTGTAGGATGTGGAAACCTCTCCATAGCATACGCGTTTTAAAACCTTGAGGAGAAGCCTTGAAGGGGAAACCTAAAGAGGACAATATCTGTTTATTAACTGTAGGCTTGGGCCGATACATTAAGAGTAATGATGCATACGCAGAAGCTAGCTGAGTAATATCATCTGATTGAATCATATGTGAGAAAGCTATTAGATTAAGCTATCTTAAGTTCTGAATTCAATGTTGTTCTTGTAGATTCTATGTTGATTCGAGAAGGAATTTGGTTTTCTGAGAAAATGTATATGAAATGGCAGAGAACTGCAAGAATGGAGTAATATGGCATTGACAGATAGCTTGAGGTATGTAAGTTAGGAACAAAGGGATGCGTTTGTGTCTCCTTAACATGCTGAGGTGCTGCAGATTATGGCTGAATGTTGATTTTAACTACGACATTTGAGATGGTTTAGAAAAATGGTCAGTTCCCGAATGTTGTGTTGAGCGGTTGTCTTTATTTTGTCGTGCTGCTATGATGTAACGTGTCTATCCCATAAAAGAACAATTCTAGGAGAGTTTTTGGATGATACGTTTTGGCTGCCTTGCATATTTTCATTCCTGAAAGTATTTAGCTCGATATAACTAGGAAAACGTTTCGAATACCATGCCCGAGTTTACAGGCATGCCAGCTTCATGTAGCCCATTTGATATTTTTTTGCCTCGGAGAACCAGCACACTTTTCACAAAATTACTAATGTTTTATTTTTTTTTACT

mRNA sequence

ATGCTCTCAACCCTCCTTCATTTCCACAACTACCTAGATCCCACCATTTCCCTCCTCCCCTCCACTCCCTCCTCCGCCTCCTCCCCTTCCTCCGCCTCCCTCAACTCCCCCACCTCCCTCCTCTCCTCCTCCTCCGCCGCACCTCTCCTCTTCTTCACCATCGCCTCCGTTCTCTCCTTCATCGCCTCCTCTCGCCCCAACTCACCTTCCTCCCCTTCCGCTGCCTCCACCACCACTCCCCCTCCTCCCACCTCCTCCTCCTCCAATTACTCCGTCTCCGCCTTCCGCGCCTTCTCCACTGACCACATCTGGTCCCTCGAAGCCCCTCTTCGCGATGCCCATTGGCGCTCCCTCTATGGCATCTCCCACCCTGTCTTCACCACCATCGTTGACAAACTCAAACCCCACATTGCCCTCTCCAATCTCTCTCTCCCTTCCGATTACGCCGTTGCCATGGTCCTCTCCCGTCTCTGCCATGGCCTCTCCGCTAAAACCCTAGCTGCTCGTTTCTCTCTCGAACCCTATCTCGTTTCCAAAATCACCAACATGGTCACCCGTCTTTTGGCCACCAAACTCTACGCTGAATTCATCAAAATTCCGGTCAGTCGTCGGCGCTTGATTGAAACAACTCAAGCTTTTGAAAAATTGACTTCTCTACCCAATATGTGTGGTGCCATTGATAGCAGTCCAATCAAGCTTCGTCGATTGCCTGCCGACCAGAGCATTTCGACTAATTACAATTGCCGATTTGGGTATCCATCGGTTCTGCTTCAGGTCGTTGCTGACAACAAGAAGATCTTCTGGGATGTATGCGTTAAAGCTCCTGGTGGCAGTGATGATGCCAGCCATTTTAGGGATAGTCTAATGTACCATAGGCTTACTTCTGGTGATATTGTATGGGACAAGGTTATCAATGTTAGGGGTCACCATGTTCGTCCTTACATTGTTGGAGATTGGGGCTATCCTCTGTTGTCTTTCCTGTTGACACCATTTTCGTCAAACGGCATCGGCACGCCTGCACAGAACCTGTTCGATGGAATGCTAATGAAGGGTCGGTCTGTTGTGGTTGACGCAATTGGGTTGCTGAAGGCTAGGTGGAAGATTCTTCAGGATTTGAATGTGGGTTTAAGCCATGCTCCACAGACCATTGTTGCTTGTTGTGTATTGCATAATTTGTGTCAAATTGCGAAGGAGCCAGAGCCTGAACCTTTGAAGGATCCAGAGGAGACTGGCCCTGCGCCTGACATCCTTGACAGTGAGAAATCCCTCTGTTACTATGGTGAAAATTCTATGTTGATTCGAGAAGGAATTTGGTTTTCTGAGAAAATAGAACTGCAAGAATGGAGTAATATGGCATTGACAGATAGCTTGAGGTATGTAAGTTAGGAACAAAGGGATGCGTTTGTGTCTCCTTAACATGCTGAGGTGCTGCAGATTATGGCTGAATGTTGATTTTAACTACGACATTTGAGATGGTTTAGAAAAATGGTCAGTTCCCGAATGTTGTGTTGAGCGGTTGTCTTTATTTTGTCGTGCTGCTATGATGTAACGTGTCTATCCCATAAAAGAACAATTCTAGGAGAGTTTTTGGATGATACGTTTTGGCTGCCTTGCATATTTTCATTCCTGAAAGTATTTAGCTCGATATAACTAGGAAAACGTTTCGAATACCATGCCCGAGTTTACAGGCATGCCAGCTTCATGTAGCCCATTTGATATTTTTTTGCCTCGGAGAACCAGCACACTTTTCACAAAATTACTAATGTTTTATTTTTTTTTACT

Coding sequence (CDS)

ATGCTCTCAACCCTCCTTCATTTCCACAACTACCTAGATCCCACCATTTCCCTCCTCCCCTCCACTCCCTCCTCCGCCTCCTCCCCTTCCTCCGCCTCCCTCAACTCCCCCACCTCCCTCCTCTCCTCCTCCTCCGCCGCACCTCTCCTCTTCTTCACCATCGCCTCCGTTCTCTCCTTCATCGCCTCCTCTCGCCCCAACTCACCTTCCTCCCCTTCCGCTGCCTCCACCACCACTCCCCCTCCTCCCACCTCCTCCTCCTCCAATTACTCCGTCTCCGCCTTCCGCGCCTTCTCCACTGACCACATCTGGTCCCTCGAAGCCCCTCTTCGCGATGCCCATTGGCGCTCCCTCTATGGCATCTCCCACCCTGTCTTCACCACCATCGTTGACAAACTCAAACCCCACATTGCCCTCTCCAATCTCTCTCTCCCTTCCGATTACGCCGTTGCCATGGTCCTCTCCCGTCTCTGCCATGGCCTCTCCGCTAAAACCCTAGCTGCTCGTTTCTCTCTCGAACCCTATCTCGTTTCCAAAATCACCAACATGGTCACCCGTCTTTTGGCCACCAAACTCTACGCTGAATTCATCAAAATTCCGGTCAGTCGTCGGCGCTTGATTGAAACAACTCAAGCTTTTGAAAAATTGACTTCTCTACCCAATATGTGTGGTGCCATTGATAGCAGTCCAATCAAGCTTCGTCGATTGCCTGCCGACCAGAGCATTTCGACTAATTACAATTGCCGATTTGGGTATCCATCGGTTCTGCTTCAGGTCGTTGCTGACAACAAGAAGATCTTCTGGGATGTATGCGTTAAAGCTCCTGGTGGCAGTGATGATGCCAGCCATTTTAGGGATAGTCTAATGTACCATAGGCTTACTTCTGGTGATATTGTATGGGACAAGGTTATCAATGTTAGGGGTCACCATGTTCGTCCTTACATTGTTGGAGATTGGGGCTATCCTCTGTTGTCTTTCCTGTTGACACCATTTTCGTCAAACGGCATCGGCACGCCTGCACAGAACCTGTTCGATGGAATGCTAATGAAGGGTCGGTCTGTTGTGGTTGACGCAATTGGGTTGCTGAAGGCTAGGTGGAAGATTCTTCAGGATTTGAATGTGGGTTTAAGCCATGCTCCACAGACCATTGTTGCTTGTTGTGTATTGCATAATTTGTGTCAAATTGCGAAGGAGCCAGAGCCTGAACCTTTGAAGGATCCAGAGGAGACTGGCCCTGCGCCTGACATCCTTGACAGTGAGAAATCCCTCTGTTACTATGGTGAAAATTCTATGTTGATTCGAGAAGGAATTTGGTTTTCTGAGAAAATAGAACTGCAAGAATGGAGTAATATGGCATTGACAGATAGCTTGAGGTATGTAAGTTAG

Protein sequence

MLSTLLHFHNYLDPTISLLPSTPSSASSPSSASLNSPTSLLSSSSAAPLLFFTIASVLSFIASSRPNSPSSPSAASTTTPPPPTSSSSNYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSEKSLCYYGENSMLIREGIWFSEKIELQEWSNMALTDSLRYVS

Homology

[Close]

BLAST of Carg24059-RA vs. NCBI nr
Match: XP_023007480.1 (protein ALP1-like [Cucurbita maxima] >XP_023007481.1 protein ALP1-like [Cucurbita maxima])

HSP 1 Score: 711.4 bits (1835), Expect = 1.9e-201
Identity = 427/429 (99.53%), Postives = 428/429 (99.77%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 8   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI
Sbjct: 128 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW
Sbjct: 248 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFS NGIGTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSPNGIGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 436

[Close]

BLAST of Carg24059-RA vs. NCBI nr
Match: XP_022948193.1 (protein ALP1-like [Cucurbita moschata] >XP_023532386.1 protein ALP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709.9 bits (1831), Expect = 5.6e-201
Identity = 426/429 (99.30%), Postives = 427/429 (99.53%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 8   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI
Sbjct: 128 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW
Sbjct: 248 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           DKVINVRGHHVRPYI GDWGYPLLSFLLTPFS NGIGTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DKVINVRGHHVRPYIAGDWGYPLLSFLLTPFSPNGIGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 436

[Close]

BLAST of Carg24059-RA vs. NCBI nr
Match: XP_022986529.1 (protein ALP1-like [Cucurbita maxima])

HSP 1 Score: 683.3 bits (1762), Expect = 5.6e-193
Identity = 408/429 (95.10%), Postives = 416/429 (96.97%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLH HNYLDPTISLLPST   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 8   MLSTLLHLHNYLDPTISLLPST---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX YSVSAFRAFSTDHIWSLEAP RDA WRSLYG
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDYSVSAFRAFSTDHIWSLEAPFRDAQWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           +SHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKT+AARFSLEPYLVSKI
Sbjct: 128 LSHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTVAARFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFE+LTSLPNMCGAID SPIKLRRLP DQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEELTSLPNMCGAIDGSPIKLRRLPPDQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           + STNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGD+VW
Sbjct: 248 NFSTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDVVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           D VINVRGHHVRPYIVGDWGYPLLSFLLTPFS NGIGTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DSVINVRGHHVRPYIVGDWGYPLLSFLLTPFSRNGIGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDP ETGPAP+ILD+E
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPNETGPAPNILDTE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 433

[Close]

BLAST of Carg24059-RA vs. NCBI nr
Match: XP_023512047.1 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 9.5e-193
Identity = 408/429 (95.10%), Postives = 416/429 (96.97%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLH HNYLDPTI+LLPST   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 8   MLSTLLHLHNYLDPTITLLPST---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX YSVSAFRAFSTDHIWSLEAP RDA WRSLYG
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDYSVSAFRAFSTDHIWSLEAPFRDAQWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           +SHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKT+AARFSLEPYLVSKI
Sbjct: 128 LSHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTVAARFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFE+LTSLPNMCGAID SPIKLRRLP DQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEELTSLPNMCGAIDGSPIKLRRLPPDQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           + STNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW
Sbjct: 248 NFSTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           D VINVRGHHVRPYIVGDWGYPLLSFLLTPFS NGIGTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DNVINVRGHHVRPYIVGDWGYPLLSFLLTPFSPNGIGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDP ETGPAP+ILD+E
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPNETGPAPNILDTE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 433

[Close]

BLAST of Carg24059-RA vs. NCBI nr
Match: XP_022943282.1 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucurbita moschata])

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 407/429 (94.87%), Postives = 416/429 (96.97%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLH HNYLDPTI+LLPST   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 8   MLSTLLHLHNYLDPTITLLPST---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX YSVSAFRAFSTDHIWSLEAP RDA WRSLYG
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDYSVSAFRAFSTDHIWSLEAPFRDAQWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           +SHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKT+AARFSLEPYLVSKI
Sbjct: 128 LSHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTVAARFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFE+LTSLPNMCGAID SPIKLRRLP DQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEELTSLPNMCGAIDGSPIKLRRLPPDQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           + STNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGD+VW
Sbjct: 248 NFSTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDVVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           D VINVRGHHVRPYIVGDWGYPLLSFLLTPFS NGIGTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DNVINVRGHHVRPYIVGDWGYPLLSFLLTPFSPNGIGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDP ETGPAP+ILD+E
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPNETGPAPNILDTE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 433

[Close]

BLAST of Carg24059-RA vs. TAIR10
Match: AT3G19120.1 (PIF / Ping-Pong family of plant transposases)

HSP 1 Score: 555.8 bits (1431), Expect = 2.4e-158
Identity = 265/340 (77.94%), Postives = 301/340 (88.53%), Query Frame = 0


Query: 90  YSVSAFRAFSTDHIWSLEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSLPSDYA 149
           YSV+AFRA +TDHIWSL+APLRDA WRSLYG+S+PVF T+VDKLKP I  SNLSLP+DYA
Sbjct: 92  YSVAAFRALTTDHIWSLDAPLRDARWRSLYGLSYPVFITVVDKLKPFITASNLSLPADYA 151

Query: 150 VAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIET 209
           VAMVLSRL HG SAKTLA+R+SL+PYL+SKITNMVTRLLATKLY EFIKIPV +RRLIET
Sbjct: 152 VAMVLSRLAHGCSAKTLASRYSLDPYLISKITNMVTRLLATKLYPEFIKIPVGKRRLIET 211

Query: 210 TQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWD 269
           TQ FE+LTSLPN+CGAIDS+P+KLRR     +    Y C++GY +VLLQVVAD+KKIFWD
Sbjct: 212 TQGFEELTSLPNICGAIDSTPVKLRR-RTKLNPRNIYGCKYGYDAVLLQVVADHKKIFWD 271

Query: 270 VCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLT 329
           VCVKAPGG DD+SHFRDSL+Y RLTSGDIVW+KVIN+RGHHVRPYIVGDW YPLLSFL+T
Sbjct: 272 VCVKAPGGEDDSSHFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMT 331

Query: 330 PFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDLNVGLSHAPQTIVACCVL 389
           PFS NG GTP +NLFDGMLMKGRSVVV+AIGLLKARWKILQ LNVG++HAPQTIVACCVL
Sbjct: 332 PFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSLNVGVNHAPQTIVACCVL 391

Query: 390 HNLCQIAKEPEPEPLKDPEETGPAPDILDSEKSLCYYGEN 430
           HNLCQIA+EPEPE  KDP+E G    +L+SE+   YYGE+
Sbjct: 392 HNLCQIAREPEPEIWKDPDEAGTPARVLESERQFYYYGES 430

[Close]

BLAST of Carg24059-RA vs. TAIR10
Match: AT5G12010.1 (unknown protein)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 83/310 (26.77%), Postives = 150/310 (48.39%), Query Frame = 0


Query: 106 LEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSL----PSDYAVAMVLSRLCHGL 165
           L+ P  D  ++  + +S   F  I D+L   +A  + +L    P    VA+ + RL  G 
Sbjct: 168 LDYPEED--FKKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGE 227

Query: 166 SAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPN 225
             + ++ +F L      K+   V + +   L  ++++ P     L    + FE ++ +PN
Sbjct: 228 PLRLVSKKFGLGISTCHKLVLEVCKAIKDVLMPKYLQWP-DDESLRNIRERFESVSGIPN 287

Query: 226 MCGAIDSSPIKLRRLPADQSISTNYNCRF-------GYPSVLLQVVADNKKIFWDVCVKA 285
           + G++ ++ I +  +    S+++ +N R         Y S+ +Q V + K +F D+C+  
Sbjct: 288 VVGSMYTTHIPI--IAPKISVASYFNKRHTERNQKTSY-SITIQAVVNPKGVFTDLCIGW 347

Query: 286 PGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSN 345
           PG   D      SL+Y R  +G +       ++G     ++ G  G+PLL ++L P++  
Sbjct: 348 PGSMPDDKVLEKSLLYQRANNGGL-------LKG----MWVAGGPGHPLLDWVLVPYTQQ 407

Query: 346 GIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQD-LNVGLSHAPQTIVACCVLHNLC 403
            + T  Q+ F+  + + + V  +A G LK RW  LQ    V L   P  + ACCVLHN+C
Sbjct: 408 NL-TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNIC 459

[Close]

BLAST of Carg24059-RA vs. TAIR10
Match: AT4G29780.1 (unknown protein)

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-19
Identity = 83/302 (27.48%), Postives = 134/302 (44.37%), Query Frame = 0


Query: 115 WRSLYGISHPVFTTIVDKLKPHIALSNL----SLPSDYAVAMVLSRLCHGLSAKTLAARF 174
           +R  + +S   F  I ++L   +   N     ++P+   V + + RL  G   + ++ RF
Sbjct: 213 FRREFRMSKSTFNLICEELDTTVTKKNTMLRDAIPAPKRVGVCVWRLATGAPLRHVSERF 272

Query: 175 SLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSP 234
            L      K+   V R +   L  +++  P S   +  T   FE +  +PN+ G+I ++ 
Sbjct: 273 GLGISTCHKLVIEVCRAIYDVLMPKYLLWP-SDSEINSTKAKFESVHKIPNVVGSIYTTH 332

Query: 235 I-----KLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGG-SDDASHF 294
           I     K+          T  N +  Y S+ +Q V +   IF DVC+  PG  +DD    
Sbjct: 333 IPIIAPKVHVAAYFNKRHTERNQKTSY-SITVQGVVNADGIFTDVCIGNPGSLTDDQILE 392

Query: 295 RDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLF 354
           + SL   R              RG     +IVG+ G+PL  +LL P++   + T  Q+ F
Sbjct: 393 KSSLSRQRA------------ARGMLRDSWIVGNSGFPLTDYLLVPYTRQNL-TWTQHAF 452

Query: 355 DGMLMKGRSVVVDAIGLLKARWKILQD-LNVGLSHAPQTIVACCVLHNLCQIAKEPEPEP 406
           +  + + + +   A   LK RW  LQ    V L   P  + ACCVLHN+C++ KE     
Sbjct: 453 NESIGEIQGIATAAFERLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPE 499

[Close]

BLAST of Carg24059-RA vs. TAIR10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-19
Identity = 75/246 (30.49%), Postives = 112/246 (45.53%), Query Frame = 0


Query: 150 VAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIET 209
           VA+ L RL  G S   +   F +    VS+IT      +  +     +  P    +L E 
Sbjct: 115 VAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERA-IHHLSWP---SKLDEI 174

Query: 210 TQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWD 269
              FEK++ LPN CGAID + I +  LPA +  +  +       S+ LQ V D    F D
Sbjct: 175 KSKFEKISGLPNCCGAIDITHI-VMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLD 234

Query: 270 VCVKAPGGSDDASHFRDSLMYHRLTSGD-IVWDKVINVRGHHVRPYIVGDWGYPLLSFLL 329
           V    PG  +D    ++S  Y  +  G  +  +K+       +R YIVGD G+PLL +LL
Sbjct: 235 VIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLL 294

Query: 330 TPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDL--NVGLSHAPQTIVAC 389
           TP+       P Q  F+    +       A+  LK RW+I+  +      +  P+ I  C
Sbjct: 295 TPYQGKPTSLP-QTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVC 354

Query: 390 CVLHNL 393
           C+LHN+
Sbjct: 355 CLLHNI 354

[Close]

BLAST of Carg24059-RA vs. TAIR10
Match: AT3G63270.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-18
Identity = 80/267 (29.96%), Postives = 126/267 (47.19%), Query Frame = 0


Query: 134 KPHIALSNLS---LPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLAT 193
           +P   L N+    L  +  VA+ L RL  G S  ++ A F +    VS++T      L  
Sbjct: 90  RPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEE 149

Query: 194 KLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRF 253
           +     ++ P S  R+ E    FE++  LPN CGAID++ I +  LPA Q+     +   
Sbjct: 150 RA-KHHLRWPDS-DRIEEIKSKFEEMYGLPNCCGAIDTTHI-IMTLPAVQASDDWCDQEK 209

Query: 254 GYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINV-RGH 313
            Y S+ LQ V D++  F ++    PGG   +   + S  +    +  I+      + +G 
Sbjct: 210 NY-SMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGA 269

Query: 314 HVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNL--FDGMLMKGRSVVVDAIGLLKARWK 373
            +R Y+VG   YPLL +L+TP  S+    P+ ++  F+    K RSV   A   LK  W+
Sbjct: 270 QIREYVVGGISYPLLPWLITPHDSD---HPSDSMVAFNERHEKVRSVAATAFQQLKGSWR 329

Query: 374 ILQDL--NVGLSHAPQTIVACCVLHNL 393
           IL  +         P  I+ CC+LHN+
Sbjct: 330 ILSKVMWRPDRRKLPSIILVCCLLHNI 349

[Close]

BLAST of Carg24059-RA vs. Swiss-Prot
Match: sp|Q9M2U3|ALPL_ARATH (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 75/246 (30.49%), Postives = 112/246 (45.53%), Query Frame = 0


Query: 150 VAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIET 209
           VA+ L RL  G S   +   F +    VS+IT      +  +     +  P    +L E 
Sbjct: 115 VAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERA-IHHLSWP---SKLDEI 174

Query: 210 TQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWD 269
              FEK++ LPN CGAID + I +  LPA +  +  +       S+ LQ V D    F D
Sbjct: 175 KSKFEKISGLPNCCGAIDITHI-VMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLD 234

Query: 270 VCVKAPGGSDDASHFRDSLMYHRLTSGD-IVWDKVINVRGHHVRPYIVGDWGYPLLSFLL 329
           V    PG  +D    ++S  Y  +  G  +  +K+       +R YIVGD G+PLL +LL
Sbjct: 235 VIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLL 294

Query: 330 TPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDL--NVGLSHAPQTIVAC 389
           TP+       P Q  F+    +       A+  LK RW+I+  +      +  P+ I  C
Sbjct: 295 TPYQGKPTSLP-QTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVC 354

Query: 390 CVLHNL 393
           C+LHN+
Sbjct: 355 CLLHNI 354

[Close]

BLAST of Carg24059-RA vs. Swiss-Prot
Match: sp|Q94K49|ALP1_ARATH (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.9e-17
Identity = 80/267 (29.96%), Postives = 126/267 (47.19%), Query Frame = 0


Query: 134 KPHIALSNLS---LPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLAT 193
           +P   L N+    L  +  VA+ L RL  G S  ++ A F +    VS++T      L  
Sbjct: 90  RPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEE 149

Query: 194 KLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRF 253
           +     ++ P S  R+ E    FE++  LPN CGAID++ I +  LPA Q+     +   
Sbjct: 150 RA-KHHLRWPDS-DRIEEIKSKFEEMYGLPNCCGAIDTTHI-IMTLPAVQASDDWCDQEK 209

Query: 254 GYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINV-RGH 313
            Y S+ LQ V D++  F ++    PGG   +   + S  +    +  I+      + +G 
Sbjct: 210 NY-SMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGA 269

Query: 314 HVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNL--FDGMLMKGRSVVVDAIGLLKARWK 373
            +R Y+VG   YPLL +L+TP  S+    P+ ++  F+    K RSV   A   LK  W+
Sbjct: 270 QIREYVVGGISYPLLPWLITPHDSD---HPSDSMVAFNERHEKVRSVAATAFQQLKGSWR 329

Query: 374 ILQDL--NVGLSHAPQTIVACCVLHNL 393
           IL  +         P  I+ CC+LHN+
Sbjct: 330 ILSKVMWRPDRRKLPSIILVCCLLHNI 349

[Close]

BLAST of Carg24059-RA vs. TrEMBL
Match: tr|A0A0A0LLT7|A0A0A0LLT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G234580 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.0e-190
Identity = 387/429 (90.21%), Postives = 397/429 (92.54%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLH HNYLDPTISLL   XXXXXXXXXXXXXXXXXXXXXXXX              
Sbjct: 60  MLSTLLHLHNYLDPTISLL-XXXXXXXXXXXXXXXXXXXXXXXXXXAAPLLFFTIASVLS 119

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
                  XXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDA WRSLYG
Sbjct: 120 FIASSRPXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAQWRSLYG 179

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           +SHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHG SAKTLA+RFSLEPYLVSKI
Sbjct: 180 LSHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGFSAKTLASRFSLEPYLVSKI 239

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFE+LTSLPNMCGAID SPIKLRRLPADQ
Sbjct: 240 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEELTSLPNMCGAIDGSPIKLRRLPADQ 299

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           + STNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSL YHRLTSGD+VW
Sbjct: 300 NFSTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLTYHRLTSGDVVW 359

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           D VINVRGHHVRPYIVGDWGYPLLSFLLTPFS NG+GTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 360 DNVINVRGHHVRPYIVGDWGYPLLSFLLTPFSPNGMGTPAQNLFDGMLMKGRSVVVDAIG 419

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPL+DP+ETGPAP+ILDSE
Sbjct: 420 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLRDPDETGPAPNILDSE 479

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 480 KSLCYYGES 487

[Close]

BLAST of Carg24059-RA vs. TrEMBL
Match: tr|A0A1S4E2D6|A0A1S4E2D6_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103498404 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 8.5e-190
Identity = 387/429 (90.21%), Postives = 397/429 (92.54%), Query Frame = 0


Query: 1   MLSTLLHFHNYLDPTISLLPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLSTLLH HNYLDPTISLL   XXXXXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 8   MLSTLLHLHNYLDPTISLL--XXXXXXXXXXXXXXXXXXXXXXXXXXXAPLLFFTIASVL 67

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVSAFRAFSTDHIWSLEAPLRDAHWRSLYG 120
                   XXXXXXXXXXXXXXXXXXXXX  VSAFRAFSTDHIWSLEAPLRDA WRSLYG
Sbjct: 68  SFIASSRPXXXXXXXXXXXXXXXXXXXXXXXVSAFRAFSTDHIWSLEAPLRDAQWRSLYG 127

Query: 121 ISHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGLSAKTLAARFSLEPYLVSKI 180
           +SHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHG SAKTLA+RFSLEPYLVSKI
Sbjct: 128 LSHPVFTTIVDKLKPHIALSNLSLPSDYAVAMVLSRLCHGFSAKTLASRFSLEPYLVSKI 187

Query: 181 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEKLTSLPNMCGAIDSSPIKLRRLPADQ 240
           TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFE+LTSLPNMCGAID SPIKLRRLPADQ
Sbjct: 188 TNMVTRLLATKLYAEFIKIPVSRRRLIETTQAFEELTSLPNMCGAIDGSPIKLRRLPADQ 247

Query: 241 SISTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDIVW 300
           + STNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGD+VW
Sbjct: 248 NFSTNYNCRFGYPSVLLQVVADNKKIFWDVCVKAPGGSDDASHFRDSLMYHRLTSGDVVW 307

Query: 301 DKVINVRGHHVRPYIVGDWGYPLLSFLLTPFSSNGIGTPAQNLFDGMLMKGRSVVVDAIG 360
           D VINVRGHHVRPYIVGDWGYPLLSFLLTPFS NG+GTPAQNLFDGMLMKGRSVVVDAIG
Sbjct: 308 DNVINVRGHHVRPYIVGDWGYPLLSFLLTPFSPNGMGTPAQNLFDGMLMKGRSVVVDAIG 367

Query: 361 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLKDPEETGPAPDILDSE 420
           LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPL+DP+ETGPAP+ILDSE
Sbjct: 368 LLKARWKILQDLNVGLSHAPQTIVACCVLHNLCQIAKEPEPEPLRDPDETGPAPNILDSE 427

Query: 421 KSLCYYGEN 430
           KSLCYYGE+
Sbjct: 428 KSLCYYGES 434

[Close]

BLAST of Carg24059-RA vs. TrEMBL
Match: tr|M5VXW3|M5VXW3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G119100 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 6.2e-164
Identity = 281/339 (82.89%), Postives = 313/339 (92.33%), Query Frame = 0


Query: 91  SVSAFRAFSTDHIWSLEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSLPSDYAV 150
           SVSAFRA +T+HIWSLEAPLRDA WRSLYG+S+PVFTT+V+KL+PHIALSNLSLPSDYAV
Sbjct: 2   SVSAFRALATEHIWSLEAPLRDAQWRSLYGLSYPVFTTVVEKLRPHIALSNLSLPSDYAV 61

Query: 151 AMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIETT 210
           AMVLSRL HG SA+TLA+R+SL+PYLVSKITNMVTRLLATKLY EFIKIPVSRRRLIETT
Sbjct: 62  AMVLSRLSHGFSAQTLASRYSLDPYLVSKITNMVTRLLATKLYPEFIKIPVSRRRLIETT 121

Query: 211 QAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWDV 270
           QAFE+LTSLPNMCGAID SPIKL +     ++  NY C++GYPSVLL+VVAD+KKIFWDV
Sbjct: 122 QAFEELTSLPNMCGAIDGSPIKLHK----HNLPGNYKCKYGYPSVLLEVVADHKKIFWDV 181

Query: 271 CVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLTP 330
           CVKAPGG+DDA+HFRDSL+Y+RLTSGDIVWDKVINVRGHHVRPYIVGDW YPLLSFLLTP
Sbjct: 182 CVKAPGGTDDATHFRDSLLYNRLTSGDIVWDKVINVRGHHVRPYIVGDWCYPLLSFLLTP 241

Query: 331 FSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDLNVGLSHAPQTIVACCVLH 390
           FS NG+GTPAQNLFDGMLMKGRSVVV+AIGLLK RWKILQDLNVGL+H PQTIVACCVLH
Sbjct: 242 FSPNGMGTPAQNLFDGMLMKGRSVVVEAIGLLKGRWKILQDLNVGLNHVPQTIVACCVLH 301

Query: 391 NLCQIAKEPEPEPLKDPEETGPAPDILDSEKSLCYYGEN 430
           NLCQIA+EPEPE  KDP+E+G  P +LDSEKS  Y+GE+
Sbjct: 302 NLCQIAREPEPELWKDPDESGAPPRVLDSEKSFYYFGES 336

[Close]

BLAST of Carg24059-RA vs. TrEMBL
Match: tr|A0A2I4FVC5|A0A2I4FVC5_9ROSI (putative nuclease HARBI1 OS=Juglans regia OX=51240 GN=LOC109002349 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 6.2e-164
Identity = 282/341 (82.70%), Postives = 312/341 (91.50%), Query Frame = 0


Query: 90  YSVSAFRAFSTDHIWSLEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSLPSDYA 149
           +SVSAFRA ST+HIWSLEAPLRDA WRSLYG+S+PVFTT+VDKLKPHIALSNLSLPSDYA
Sbjct: 105 FSVSAFRALSTEHIWSLEAPLRDAQWRSLYGLSYPVFTTVVDKLKPHIALSNLSLPSDYA 164

Query: 150 VAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIET 209
           VAMVLSRL HG SAKTLA+R+SLEPYL+SKITNMVTRLLATKLY EFIKIPVSRRRLIET
Sbjct: 165 VAMVLSRLSHGFSAKTLASRYSLEPYLISKITNMVTRLLATKLYPEFIKIPVSRRRLIET 224

Query: 210 TQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWD 269
           TQAFE+LTSLPNMCGAID SPIKL  LP D +++ NY CR+GY SV LQVVAD+KKIFWD
Sbjct: 225 TQAFEELTSLPNMCGAIDGSPIKLHSLPNDPNLAANYKCRYGYSSVQLQVVADHKKIFWD 284

Query: 270 VCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLT 329
           VCVKAPG +DDA+HFRDSL+Y+RLTSGDIVW+KVINVRGH+VRPYIVGDW YPL+ FLLT
Sbjct: 285 VCVKAPGATDDATHFRDSLLYNRLTSGDIVWEKVINVRGHNVRPYIVGDWSYPLMPFLLT 344

Query: 330 PFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDLNVGLSHAPQTIVACCVL 389
           PFS  G+G PAQNLFDGMLMKGRSVVV+AIGLLK RWKILQDLNVGLSHAPQTIVACCVL
Sbjct: 345 PFSPIGMGVPAQNLFDGMLMKGRSVVVEAIGLLKGRWKILQDLNVGLSHAPQTIVACCVL 404

Query: 390 HNLCQIAKEPEPEPL-KDPEETGPAPDILDSEKSLCYYGEN 430
           HNLCQIA+EPEPE L K+P+E+G  P +LD EKS  Y+GE+
Sbjct: 405 HNLCQIAREPEPEELWKEPDESGTPPRVLDGEKSFYYHGES 445

[Close]

BLAST of Carg24059-RA vs. TrEMBL
Match: tr|A0A0L9U2I0|A0A0L9U2I0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g027300 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 6.2e-164
Identity = 277/339 (81.71%), Postives = 309/339 (91.15%), Query Frame = 0


Query: 90  YSVSAFRAFSTDHIWSLEAPLRDAHWRSLYGISHPVFTTIVDKLKPHIALSNLSLPSDYA 149
           YSVSAFRA ST+HIWSLEAPLRDA WRSLYG+S+PVFTT+VDKLKPHIALSNLSLPSDYA
Sbjct: 94  YSVSAFRALSTEHIWSLEAPLRDAQWRSLYGLSYPVFTTVVDKLKPHIALSNLSLPSDYA 153

Query: 150 VAMVLSRLCHGLSAKTLAARFSLEPYLVSKITNMVTRLLATKLYAEFIKIPVSRRRLIET 209
           VAMVLSRL HGLSAKTLAAR+SL+PYLVSKITNMVTRLLATKLY EFIKIPV RRRL+ET
Sbjct: 154 VAMVLSRLAHGLSAKTLAARYSLDPYLVSKITNMVTRLLATKLYPEFIKIPVGRRRLLET 213

Query: 210 TQAFEKLTSLPNMCGAIDSSPIKLRRLPADQSISTNYNCRFGYPSVLLQVVADNKKIFWD 269
           TQAFE+LTSLPNMCGAID++P+ LR  P        Y CR+GYPS+LLQVV+D+KKIFWD
Sbjct: 214 TQAFEELTSLPNMCGAIDTTPVHLRSTPNSNPNLNPYRCRYGYPSLLLQVVSDHKKIFWD 273

Query: 270 VCVKAPGGSDDASHFRDSLMYHRLTSGDIVWDKVINVRGHHVRPYIVGDWGYPLLSFLLT 329
           VCVKAPGG+DDA+HFRDSL+YHRLTSGD+VWDKVI+VRGHHVRPY+VGDW +PLL FLLT
Sbjct: 274 VCVKAPGGTDDATHFRDSLLYHRLTSGDVVWDKVISVRGHHVRPYVVGDWCFPLLPFLLT 333

Query: 330 PFSSNGIGTPAQNLFDGMLMKGRSVVVDAIGLLKARWKILQDLNVGLSHAPQTIVACCVL 389
           PFS +G+GTPAQNLFDGMLMKGRSVVV+AI LLK RWKILQDLN G+ HAPQTIVACCVL
Sbjct: 334 PFSPSGMGTPAQNLFDGMLMKGRSVVVEAIALLKGRWKILQDLNTGVHHAPQTIVACCVL 393

Query: 390 HNLCQIAKEPEPEPLKDPEETGPAPDILDSEKSLCYYGE 429
           HNLCQIA+EPEPE  K+P+E+GP P ++DSEKS  YYGE
Sbjct: 394 HNLCQIAREPEPEIWKEPDESGPPPRVMDSEKSFHYYGE 432

The following BLAST results are available for this feature:

BLAST of Carg24059-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007480.1	1.9e-201	99.53	protein ALP1-like [Cucurbita maxima] >XP_023007481.1 protein ALP1-like [Cucurbit...	[more]
XP_022948193.1	5.6e-201	99.30	protein ALP1-like [Cucurbita moschata] >XP_023532386.1 protein ALP1-like [Cucurb...	[more]
XP_022986529.1	5.6e-193	95.10	protein ALP1-like [Cucurbita maxima]	[more]
XP_023512047.1	9.5e-193	95.10	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucurbita pepo subsp....	[more]
XP_022943282.1	1.2e-192	94.87	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucurbita moschata]	[more]

BLAST of Carg24059-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19120.1	2.4e-158	77.94	PIF / Ping-Pong family of plant transposases	[more]
AT5G12010.1	1.3e-23	26.77	unknown protein	[more]
AT4G29780.1	1.2e-19	27.48	unknown protein	[more]
AT3G55350.1	7.7e-19	30.49	PIF / Ping-Pong family of plant transposases	[more]
AT3G63270.1	3.8e-18	29.96	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of Carg24059-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2U3\|ALPL_ARATH	1.4e-17	30.49	Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1	[more]
sp\|Q94K49\|ALP1_ARATH	6.9e-17	29.96	Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg24059-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LLT7\|A0A0A0LLT7_CUCSA	1.0e-190	90.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G234580 PE=4 SV=1	[more]
tr\|A0A1S4E2D6\|A0A1S4E2D6_CUCME	8.5e-190	90.21	putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103498404 PE=4 SV=1	[more]
tr\|M5VXW3\|M5VXW3_PRUPE	6.2e-164	82.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G119100 PE=4 SV=1	[more]
tr\|A0A2I4FVC5\|A0A2I4FVC5_9ROSI	6.2e-164	82.70	putative nuclease HARBI1 OS=Juglans regia OX=51240 GN=LOC109002349 PE=4 SV=1	[more]
tr\|A0A0L9U2I0\|A0A0L9U2I0_PHAAN	6.2e-164	81.71	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g027300 PE...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg24059	Carg24059	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg24059-RA	Carg24059-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24059-RA.three_prime_UTR.1	Carg24059-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24059-RA.CDS.3	Carg24059-RA.CDS.3	CDS
Carg24059-RA.CDS.2	Carg24059-RA.CDS.2	CDS
Carg24059-RA.CDS.1	Carg24059-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24059-RA.exon.3	Carg24059-RA.exon.3	exon
Carg24059-RA.exon.2	Carg24059-RA.exon.2	exon
Carg24059-RA.exon.1	Carg24059-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 226..391 e-value: 1.3E-17 score: 63.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..87
None	No IPR available	PANTHER	PTHR22930:SF58	SUBFAMILY NOT NAMED	coord: 33..429
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 33..429